RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W YGR240C-AQ3E786 66 aa0.89□□□□□ -2.27
CTF4YPR135W CWP2P43497 92 aa0.88□□□□□ -2.27
CTF4YPR135W YGR025WP53216 100 aa0.88□□□□□ -2.27
CTF4YPR135W RPS22BQ3E7Y3 130 aaKnown RBP0.88□□□□□ -2.27
CTF4YPR135W YHR138CP38841 114 aaPredicted RBP0.88□□□□□ -2.27
CTF4YPR135W MRPS12P53732 153 aa0.88□□□□□ -2.27
CTF4YPR135W ICY1Q04329 127 aa0.87□□□□□ -2.27
CTF4YPR135W ENV10Q99382 181 aa0.87□□□□□ -2.27
CTF4YPR135W COX9P07255 59 aa0.87□□□□□ -2.27
CTF4YPR135W IMP2P46972 177 aa0.87□□□□□ -2.27
CTF4YPR135W RPL37BP51402 88 aaKnown RBP0.87□□□□□ -2.27
CTF4YPR135W LSM6Q06406 86 aaKnown RBP0.87□□□□□ -2.27
CTF4YPR135W POC4Q12245 148 aaPredicted RBP0.87□□□□□ -2.27
CTF4YPR135W YLR363W-AQ3E747 85 aa0.87□□□□□ -2.27
CTF4YPR135W YMR175W-AQ3E766 64 aa0.86□□□□□ -2.27
CTF4YPR135W PFY1P07274 126 aa0.86□□□□□ -2.27
CTF4YPR135W SRB6P32570 121 aa0.86□□□□□ -2.27
CTF4YPR135W PDX3P38075 228 aaKnown RBP0.86□□□□□ -2.27
CTF4YPR135W YPR108W-AQ3E7B3 70 aa0.86□□□□□ -2.27
CTF4YPR135W SUS1Q6WNK7 96 aa0.86□□□□□ -2.27
CTF4YPR135W PAU6P0CE90 120 aa0.85□□□□□ -2.27
CTF4YPR135W PAU18P0CE91 120 aa0.85□□□□□ -2.27
CTF4YPR135W MRP17P28778 131 aa0.85□□□□□ -2.27
CTF4YPR135W YBR013CP38215 129 aa0.85□□□□□ -2.27
CTF4YPR135W RSM18P40033 138 aa0.85□□□□□ -2.27
CTF4YPR135W ICS3P47034 131 aa0.85□□□□□ -2.27
CTF4YPR135W MIC27P50945 234 aa0.85□□□□□ -2.27
CTF4YPR135W YCR095W-AQ3E787 52 aa0.85□□□□□ -2.27
CTF4YPR135W NHP2P32495 156 aaPredicted RBP0.85□□□□□ -2.27
CTF4YPR135W RPA12P32529 125 aaKnown RBP0.85□□□□□ -2.27
CTF4YPR135W RPS29AP41057 56 aaKnown RBP0.85□□□□□ -2.27
CTF4YPR135W YLR255CO13574 117 aa0.85□□□□□ -2.27
CTF4YPR135W YCR085WP25650 117 aa0.84□□□□□ -2.27
CTF4YPR135W YHL005CP38752 130 aa0.84□□□□□ -2.27
CTF4YPR135W YDR210WQ03482 75 aa0.84□□□□□ -2.27
CTF4YPR135W YBL071CP38185 102 aa0.84□□□□□ -2.28
CTF4YPR135W LSM2P38203 95 aaKnown RBP0.84□□□□□ -2.28
CTF4YPR135W AIM19P40502 157 aa0.84□□□□□ -2.28
CTF4YPR135W YPR145C-AQ2V2P0 78 aa0.84□□□□□ -2.28
CTF4YPR135W YGL258W-AQ3E740 77 aa0.84□□□□□ -2.28
CTF4YPR135W YOL013W-AP0C272 63 aaPredicted RBP0.83□□□□□ -2.28
CTF4YPR135W HUG1Q6Q5K6 68 aa0.83□□□□□ -2.28
CTF4YPR135W YNR034W-AQ3E841 98 aa0.83□□□□□ -2.28
CTF4YPR135W PAU8P0CE92 120 aa0.82□□□□□ -2.28
CTF4YPR135W PAU11P0CE93 120 aa0.82□□□□□ -2.28
CTF4YPR135W PAU13P38725 120 aa0.82□□□□□ -2.28
CTF4YPR135W PAU4P53427 120 aa0.82□□□□□ -2.28
CTF4YPR135W PAU10Q03050 120 aa0.82□□□□□ -2.28
CTF4YPR135W YGL041C-BQ3E750 60 aa0.82□□□□□ -2.28
CTF4YPR135W PAU9Q3E770 120 aa0.82□□□□□ -2.28
CTF4YPR135W YPR010C-AA5Z2X5 72 aa0.82□□□□□ -2.28
CTF4YPR135W YNL122CP53921 115 aaPredicted RBP0.82□□□□□ -2.28
CTF4YPR135W SNA2P56508 79 aa0.82□□□□□ -2.28
CTF4YPR135W SPI1P40092 148 aa0.81□□□□□ -2.28
CTF4YPR135W YPL038W-AQ3E7B4 63 aa0.81□□□□□ -2.28
CTF4YPR135W YHR213W-AQ8TGT4 77 aa0.81□□□□□ -2.28
CTF4YPR135W IRC21Q04772 201 aa0.8□□□□□ -2.28
CTF4YPR135W FPR2P32472 135 aa0.8□□□□□ -2.28
CTF4YPR135W MRX7P53869 86 aa0.8□□□□□ -2.28
CTF4YPR135W ERI1P62651 68 aaKnown RBP0.79□□□□□ -2.28
CTF4YPR135W YDR119W-AQ2V2P9 66 aa0.79□□□□□ -2.28
CTF4YPR135W YHR173CP38864 112 aa0.79□□□□□ -2.28
CTF4YPR135W PAU20Q08322 120 aa0.79□□□□□ -2.28
CTF4YPR135W PAU1P0CE88 120 aa0.79□□□□□ -2.28
CTF4YPR135W PAU14P0CE89 120 aa0.79□□□□□ -2.28
CTF4YPR135W MRPL31P14063 131 aaPredicted RBP0.79□□□□□ -2.28
CTF4YPR135W YAR064WP39563 99 aa0.79□□□□□ -2.28
CTF4YPR135W RPS29BP41058 56 aaKnown RBP0.79□□□□□ -2.28
CTF4YPR135W MVB12P42939 101 aa0.79□□□□□ -2.28
CTF4YPR135W YIL156W-BQ2V2P4 73 aa0.79□□□□□ -2.28
CTF4YPR135W TOM6P33448 61 aa0.78□□□□□ -2.28
CTF4YPR135W YJL009WP47078 108 aa0.78□□□□□ -2.28
CTF4YPR135W MGR2Q02889 113 aa0.78□□□□□ -2.28
CTF4YPR135W YDR381C-AQ3E6R5 114 aa0.78□□□□□ -2.28
CTF4YPR135W PAU23Q07987 124 aa0.78□□□□□ -2.29
CTF4YPR135W PAU17Q12370 124 aa0.78□□□□□ -2.29
CTF4YPR135W HHY1P39982 102 aa0.77□□□□□ -2.29
CTF4YPR135W YMR122W-AQ3E842 84 aa0.77□□□□□ -2.29
CTF4YPR135W YER188C-AP0C0V2 99 aa0.76□□□□□ -2.29
CTF4YPR135W BSC4P53841 131 aa0.76□□□□□ -2.29
CTF4YPR135W PAI3P01094 68 aa0.76□□□□□ -2.29
CTF4YPR135W YBR292CP38357 123 aa0.76□□□□□ -2.29
CTF4YPR135W SHU1P38751 150 aa0.76□□□□□ -2.29
CTF4YPR135W NOP10Q6Q547 58 aaPredicted RBP0.76□□□□□ -2.29
CTF4YPR135W HUA1P40325 198 aa0.75□□□□□ -2.29
CTF4YPR135W YJR128WP47162 119 aa0.75□□□□□ -2.29
CTF4YPR135W YOR105WQ08504 108 aa0.75□□□□□ -2.29
CTF4YPR135W YMR007WQ03675 126 aa0.74□□□□□ -2.29
CTF4YPR135W YOR072WQ08486 104 aa0.74□□□□□ -2.29
CTF4YPR135W YBR200W-AQ3E755 54 aa0.74□□□□□ -2.29
CTF4YPR135W YGR121W-AQ3E816 71 aa0.74□□□□□ -2.29
CTF4YPR135W SWM2P40342 146 aa0.74□□□□□ -2.29
CTF4YPR135W YOR314WQ12506 109 aa0.74□□□□□ -2.29
CTF4YPR135W YDL022C-AP0C5L6 82 aa0.74□□□□□ -2.29
CTF4YPR135W RPC10P40422 70 aa0.74□□□□□ -2.29
CTF4YPR135W ATX1P38636 73 aa0.73□□□□□ -2.29
CTF4YPR135W YBR201C-AQ2V2Q3 67 aa0.73□□□□□ -2.29
CTF4YPR135W Q0032Q9ZZX7 96 aa0.73□□□□□ -2.29
CTF4YPR135W YAL065CO13511 128 aa0.73□□□□□ -2.29
CTF4YPR135W YIL102CP40488 101 aa0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms