RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C HMRA2P0CY13 119 aa1.31□□□□□ -2.2
RPC40YPR110C AUA1P32450 94 aa1.31□□□□□ -2.2
RPC40YPR110C PAU16P35994 123 aa1.31□□□□□ -2.2
RPC40YPR110C TOS6P48560 102 aa1.31□□□□□ -2.2
RPC40YPR110C ERV14P53173 138 aa1.31□□□□□ -2.2
RPC40YPR110C SGF11Q03067 99 aa1.31□□□□□ -2.2
RPC40YPR110C VAM10Q08474 114 aa1.31□□□□□ -2.2
RPC40YPR110C UBC5P15732 148 aa1.3□□□□□ -2.2
RPC40YPR110C FUN14P18411 198 aa1.3□□□□□ -2.2
RPC40YPR110C YKL044WP36092 106 aa1.3□□□□□ -2.2
RPC40YPR110C RPL37AP49166 88 aaKnown RBP1.3□□□□□ -2.2
RPC40YPR110C PMP3P87284 55 aa1.3□□□□□ -2.2
RPC40YPR110C YDR042CQ03205 200 aa1.3□□□□□ -2.2
RPC40YPR110C YGR240C-AQ3E786 66 aa1.3□□□□□ -2.2
RPC40YPR110C MRPL44P19956 98 aa1.29□□□□□ -2.2
RPC40YPR110C YGL149WP53116 101 aa1.29□□□□□ -2.2
RPC40YPR110C ERI1P62651 68 aaKnown RBP1.29□□□□□ -2.2
RPC40YPR110C YMR103CQ04436 120 aa1.29□□□□□ -2.2
RPC40YPR110C YOR008C-AQ3E7B9 74 aa1.29□□□□□ -2.2
RPC40YPR110C YMR122W-AQ3E842 84 aa1.29□□□□□ -2.2
RPC40YPR110C RTC6O14464 93 aa1.28□□□□□ -2.2
RPC40YPR110C TDA2P40045 126 aa1.28□□□□□ -2.2
RPC40YPR110C MSL1P40567 111 aaPredicted RBP1.28□□□□□ -2.2
RPC40YPR110C SPC1P46965 94 aa1.28□□□□□ -2.2
RPC40YPR110C NAT5Q08689 176 aa1.28□□□□□ -2.2
RPC40YPR110C YPR010C-AA5Z2X5 72 aa1.27□□□□□ -2.21
RPC40YPR110C RPL33AP05744 107 aaKnown RBP1.27□□□□□ -2.21
RPC40YPR110C YBR027CP38220 110 aa1.27□□□□□ -2.21
RPC40YPR110C YHR130CP38834 111 aa1.27□□□□□ -2.21
RPC40YPR110C YPL261CQ08976 102 aa1.27□□□□□ -2.21
RPC40YPR110C DYN1P36022 4092 aa1.26□□□□□ -2.21
RPC40YPR110C YDL022C-AP0C5L6 82 aa1.26□□□□□ -2.21
RPC40YPR110C HAP3P13434 144 aa1.26□□□□□ -2.21
RPC40YPR110C SHU1P38751 150 aa1.26□□□□□ -2.21
RPC40YPR110C YAR064WP39563 99 aa1.26□□□□□ -2.21
RPC40YPR110C YLR194CQ05777 254 aa1.26□□□□□ -2.21
RPC40YPR110C PAU23Q07987 124 aa1.26□□□□□ -2.21
RPC40YPR110C PAU17Q12370 124 aa1.26□□□□□ -2.21
RPC40YPR110C YLL066W-BQ8TGJ7 56 aa1.26□□□□□ -2.21
RPC40YPR110C ENV10Q99382 181 aa1.26□□□□□ -2.21
RPC40YPR110C YGR164WP53291 111 aa1.25□□□□□ -2.21
RPC40YPR110C YNL190WP53872 204 aa1.25□□□□□ -2.21
RPC40YPR110C YLR363W-AQ3E747 85 aa1.25□□□□□ -2.21
RPC40YPR110C YMR175W-AQ3E766 64 aa1.25□□□□□ -2.21
RPC40YPR110C RRT15Q3E811 62 aa1.25□□□□□ -2.21
RPC40YPR110C YAL065CO13511 128 aa1.24□□□□□ -2.21
RPC40YPR110C YGL014C-AP0C5N1 53 aa1.24□□□□□ -2.21
RPC40YPR110C YER187WP40102 141 aa1.24□□□□□ -2.21
RPC40YPR110C RPC10P40422 70 aa1.24□□□□□ -2.21
RPC40YPR110C YIL102CP40488 101 aa1.24□□□□□ -2.21
RPC40YPR110C MRPS12P53732 153 aa1.24□□□□□ -2.21
RPC40YPR110C SNA2P56508 79 aa1.24□□□□□ -2.21
RPC40YPR110C PAI3P01094 68 aa1.23□□□□□ -2.21
RPC40YPR110C HYP2P23301 157 aaKnown RBP1.23□□□□□ -2.21
RPC40YPR110C AIM4P38305 123 aaPredicted RBP1.23□□□□□ -2.21
RPC40YPR110C CWP2P43497 92 aa1.23□□□□□ -2.21
RPC40YPR110C YLR296WQ05898 108 aa1.23□□□□□ -2.21
RPC40YPR110C YLL006W-AQ3E814 58 aa1.23□□□□□ -2.21
RPC40YPR110C OST5Q92316 86 aa1.23□□□□□ -2.21
RPC40YPR110C YJL197C-AP0C5P0 93 aa1.22□□□□□ -2.21
RPC40YPR110C MVB12P42939 101 aa1.22□□□□□ -2.21
RPC40YPR110C YDR029WQ12111 104 aa1.22□□□□□ -2.21
RPC40YPR110C YKL023C-AQ2V2P3 75 aa1.22□□□□□ -2.21
RPC40YPR110C MIC10Q96VH5 97 aa1.22□□□□□ -2.21
RPC40YPR110C ECM12O13529 151 aa1.21□□□□□ -2.22
RPC40YPR110C YER188C-AP0C0V2 99 aa1.21□□□□□ -2.22
RPC40YPR110C YBL039W-BP0C268 59 aa1.21□□□□□ -2.22
RPC40YPR110C YDR034C-AP0C289 58 aa1.21□□□□□ -2.22
RPC40YPR110C NHP2P32495 156 aaPredicted RBP1.21□□□□□ -2.22
RPC40YPR110C YNL198CP40166 100 aa1.21□□□□□ -2.22
RPC40YPR110C YMR122CQ03879 124 aa1.21□□□□□ -2.22
RPC40YPR110C LSM6Q06406 86 aaKnown RBP1.21□□□□□ -2.22
RPC40YPR110C HPA2Q06592 156 aa1.21□□□□□ -2.22
RPC40YPR110C YIL102C-AQ2V2P5 75 aa1.21□□□□□ -2.22
RPC40YPR110C YGL041C-BQ3E750 60 aa1.21□□□□□ -2.22
RPC40YPR110C Q0032Q9ZZX7 96 aa1.21□□□□□ -2.22
RPC40YPR110C RPL36BO14455 100 aaKnown RBP1.2□□□□□ -2.22
RPC40YPR110C RPL36AP05745 100 aaPredicted RBP1.2□□□□□ -2.22
RPC40YPR110C RPL29P05747 59 aaPredicted RBP1.2□□□□□ -2.22
RPC40YPR110C YOL013W-AP0C272 63 aaPredicted RBP1.2□□□□□ -2.22
RPC40YPR110C UBC4P15731 148 aa1.2□□□□□ -2.22
RPC40YPR110C COX23P38824 151 aa1.2□□□□□ -2.22
RPC40YPR110C AIM19P40502 157 aa1.2□□□□□ -2.22
RPC40YPR110C RPL37BP51402 88 aaKnown RBP1.2□□□□□ -2.22
RPC40YPR110C IRC21Q04772 201 aa1.2□□□□□ -2.22
RPC40YPR110C YOR034C-AQ3E735 80 aa1.2□□□□□ -2.22
RPC40YPR110C HUR1P45820 110 aa1.19□□□□□ -2.22
RPC40YPR110C ICY1Q04329 127 aa1.19□□□□□ -2.22
RPC40YPR110C YLR307C-AQ3E825 87 aa1.19□□□□□ -2.22
RPC40YPR110C KSH1Q8TGJ3 72 aa1.19□□□□□ -2.22
RPC40YPR110C LCL1Q02786 101 aa1.18□□□□□ -2.22
RPC40YPR110C YBR230W-AQ3E762 66 aa1.18□□□□□ -2.22
RPC40YPR110C YNL042W-BQ3E7Z2 85 aa1.18□□□□□ -2.22
RPC40YPR110C YJL127C-BQ3E828 52 aa1.18□□□□□ -2.22
RPC40YPR110C YJR107C-AP0CT86 78 aa1.16□□□□□ -2.22
RPC40YPR110C RPA12P32529 125 aaKnown RBP1.16□□□□□ -2.22
RPC40YPR110C BSC4P53841 131 aa1.16□□□□□ -2.22
RPC40YPR110C ATP18P81450 59 aa1.16□□□□□ -2.22
RPC40YPR110C DDR2P89113 61 aa1.16□□□□□ -2.22
RPC40YPR110C YLR285C-AQ3E771 56 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms