RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W YLR159WP0CE97 114 aa3.78□□□□□ -1.8
HFI1YPL254W YLR161WP0CE98 114 aa3.78□□□□□ -1.8
HFI1YPL254W YSY6P38374 65 aa3.78□□□□□ -1.8
HFI1YPL254W YFL019CP43576 117 aa3.78□□□□□ -1.8
HFI1YPL254W RPL38P49167 78 aaKnown RBP3.78□□□□□ -1.8
HFI1YPL254W YDR115WQ04598 105 aa3.78□□□□□ -1.8
HFI1YPL254W SHH4Q06236 168 aa3.78□□□□□ -1.8
HFI1YPL254W YPL038W-AQ3E7B4 63 aa3.78□□□□□ -1.8
HFI1YPL254W YBL039W-BP0C268 59 aa3.77□□□□□ -1.81
HFI1YPL254W CUP1-1P0CX80 61 aa3.77□□□□□ -1.81
HFI1YPL254W CUP1-2P0CX81 61 aa3.77□□□□□ -1.81
HFI1YPL254W GAT4P40569 121 aa3.75□□□□□ -1.81
HFI1YPL254W YIR021W-AQ3E739 70 aa3.75□□□□□ -1.81
HFI1YPL254W YBR230W-AQ3E762 66 aa3.75□□□□□ -1.81
HFI1YPL254W TSC3Q3E790 80 aa3.75□□□□□ -1.81
HFI1YPL254W YLL066W-BQ8TGJ7 56 aa3.75□□□□□ -1.81
HFI1YPL254W NUM1Q00402 2748 aa3.75□□□□□ -1.81
HFI1YPL254W YPR010C-AA5Z2X5 72 aa3.74□□□□□ -1.81
HFI1YPL254W UBC4P15731 148 aa3.74□□□□□ -1.81
HFI1YPL254W RPL26AP05743 127 aaKnown RBP3.73□□□□□ -1.81
HFI1YPL254W RPL26BP53221 127 aaKnown RBP3.73□□□□□ -1.81
HFI1YPL254W YJL127C-BQ3E828 52 aa3.73□□□□□ -1.81
HFI1YPL254W UTP20P35194 2493 aaKnown RBP3.73□□□□□ -1.81
HFI1YPL254W ECM12O13529 151 aa3.73□□□□□ -1.81
HFI1YPL254W FYV5P25585 152 aa3.73□□□□□ -1.81
HFI1YPL254W RSM18P40033 138 aa3.73□□□□□ -1.81
HFI1YPL254W TDA2P40045 126 aa3.73□□□□□ -1.81
HFI1YPL254W SPC1P46965 94 aa3.73□□□□□ -1.81
HFI1YPL254W TOM6P33448 61 aa3.72□□□□□ -1.81
HFI1YPL254W ICS3P47034 131 aa3.72□□□□□ -1.81
HFI1YPL254W YOL014WQ08110 124 aa3.72□□□□□ -1.81
HFI1YPL254W YDR246W-AQ3E763 66 aa3.72□□□□□ -1.81
HFI1YPL254W YLR307C-AQ3E825 87 aa3.72□□□□□ -1.81
HFI1YPL254W YAR023CD6VPM8 179 aa3.71□□□□□ -1.82
HFI1YPL254W RSM19P53733 91 aaPredicted RBP3.71□□□□□ -1.82
HFI1YPL254W Q0032Q9ZZX7 96 aa3.71□□□□□ -1.82
HFI1YPL254W DYN1P36022 4092 aa3.71□□□□□ -1.82
HFI1YPL254W RTC6O14464 93 aa3.7□□□□□ -1.82
HFI1YPL254W BET1P22804 142 aa3.7□□□□□ -1.82
HFI1YPL254W YER187WP40102 141 aa3.7□□□□□ -1.82
HFI1YPL254W SNA2P56508 79 aa3.7□□□□□ -1.82
HFI1YPL254W ATP20Q12233 115 aa3.7□□□□□ -1.82
HFI1YPL254W YLR361C-AQ3E795 98 aa3.69□□□□□ -1.82
HFI1YPL254W YNL042W-BQ3E7Z2 85 aa3.68□□□□□ -1.82
HFI1YPL254W YHR213W-BQ8TGK1 99 aa3.68□□□□□ -1.82
HFI1YPL254W YCR050CP25630 102 aa3.67□□□□□ -1.82
HFI1YPL254W AUA1P32450 94 aa3.67□□□□□ -1.82
HFI1YPL254W YRA2P36036 203 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
HFI1YPL254W AIM4P38305 123 aaPredicted RBP3.67□□□□□ -1.82
HFI1YPL254W COX23P38824 151 aa3.67□□□□□ -1.82
HFI1YPL254W YER039C-AP0CD97 72 aa3.66□□□□□ -1.82
HFI1YPL254W EDC2P40023 145 aaPredicted RBP3.66□□□□□ -1.82
HFI1YPL254W YJL133C-AQ3E7A3 74 aa3.66□□□□□ -1.82
HFI1YPL254W NOP10Q6Q547 58 aaPredicted RBP3.66□□□□□ -1.82
HFI1YPL254W PEX22P39718 180 aa3.65□□□□□ -1.83
HFI1YPL254W SFT1P43682 97 aa3.65□□□□□ -1.83
HFI1YPL254W BSC4P53841 131 aa3.65□□□□□ -1.83
HFI1YPL254W YHR007C-AQ07074 71 aa3.65□□□□□ -1.83
HFI1YPL254W YKL183C-AQ3E765 70 aa3.64□□□□□ -1.83
HFI1YPL254W DDR2P89113 61 aa3.63□□□□□ -1.83
HFI1YPL254W YOR314WQ12506 109 aa3.63□□□□□ -1.83
HFI1YPL254W RPL36BO14455 100 aaKnown RBP3.62□□□□□ -1.83
HFI1YPL254W SPT4P32914 102 aaPredicted RBP3.62□□□□□ -1.83
HFI1YPL254W ECM19Q06011 112 aa3.61□□□□□ -1.83
HFI1YPL254W YGL193CP53097 103 aa3.6□□□□□ -1.83
HFI1YPL254W YOR072WQ08486 104 aa3.6□□□□□ -1.83
HFI1YPL254W YGL041C-BQ3E750 60 aa3.6□□□□□ -1.83
HFI1YPL254W YIL102CP40488 101 aa3.6□□□□□ -1.83
HFI1YPL254W YPR195CQ06594 109 aa3.59□□□□□ -1.84
HFI1YPL254W TDA8Q6B2U8 126 aa3.59□□□□□ -1.84
HFI1YPL254W YOL166W-AQ8TGJ1 51 aa3.59□□□□□ -1.84
HFI1YPL254W MIC10Q96VH5 97 aa3.59□□□□□ -1.84
HFI1YPL254W LIP1Q03579 150 aa3.57□□□□□ -1.84
HFI1YPL254W YLR162WQ06235 118 aa3.57□□□□□ -1.84
HFI1YPL254W RPL36AP05745 100 aaPredicted RBP3.56□□□□□ -1.84
HFI1YPL254W YDR034C-AP0C289 58 aa3.54□□□□□ -1.84
HFI1YPL254W YHL005CP38752 130 aa3.54□□□□□ -1.84
HFI1YPL254W YDR182W-AQ3E796 67 aa3.54□□□□□ -1.84
HFI1YPL254W RPS30AP0CX33 63 aaKnown RBP3.54□□□□□ -1.84
HFI1YPL254W RPS30BP0CX34 63 aaKnown RBP3.54□□□□□ -1.84
HFI1YPL254W SBH1P52870 82 aa3.54□□□□□ -1.84
HFI1YPL254W YJL197C-AP0C5P0 93 aa3.53□□□□□ -1.84
HFI1YPL254W YOL013W-AP0C272 63 aaPredicted RBP3.52□□□□□ -1.85
HFI1YPL254W YBR027CP38220 110 aa3.51□□□□□ -1.85
HFI1YPL254W YAR064WP39563 99 aa3.51□□□□□ -1.85
HFI1YPL254W KSH1Q8TGJ3 72 aa3.51□□□□□ -1.85
HFI1YPL254W YGR121W-AQ3E816 71 aa3.5□□□□□ -1.85
HFI1YPL254W YOR268CQ08734 132 aa3.49□□□□□ -1.85
HFI1YPL254W YDL012CQ12489 107 aa3.49□□□□□ -1.85
HFI1YPL254W YOR381W-AQ3E804 55 aa3.47□□□□□ -1.85
HFI1YPL254W YBR121C-AP0C5L4 52 aa3.47□□□□□ -1.85
HFI1YPL254W YDR010CQ12426 110 aa3.47□□□□□ -1.85
HFI1YPL254W YPR153WQ06537 140 aa3.45□□□□□ -1.86
HFI1YPL254W LCL2Q08045 131 aa3.45□□□□□ -1.86
HFI1YPL254W SPG1P50088 95 aa3.44□□□□□ -1.86
HFI1YPL254W YLR157W-DP0CE99 70 aa3.43□□□□□ -1.86
HFI1YPL254W RPS28BP0C0X0 67 aaKnown RBP3.42□□□□□ -1.86
HFI1YPL254W YHR125WP38831 101 aa3.42□□□□□ -1.86
HFI1YPL254W RPS28AQ3E7X9 67 aaPredicted RBP3.42□□□□□ -1.86
HFI1YPL254W YOL097W-AQ3E7Y9 61 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms