RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C YKL023C-AQ2V2P3 75 aa4.47□□□□□ -1.69
UME1YPL139C YML100W-AQ8TGT0 57 aa4.47□□□□□ -1.69
UME1YPL139C RPL29P05747 59 aaPredicted RBP4.45□□□□□ -1.7
UME1YPL139C YGL149WP53116 101 aa4.45□□□□□ -1.7
UME1YPL139C YML079WQ03629 201 aa4.45□□□□□ -1.7
UME1YPL139C YAL063C-AQ3E791 96 aa4.45□□□□□ -1.7
UME1YPL139C YOR020W-AQ3E824 90 aa4.45□□□□□ -1.7
UME1YPL139C UBC4P15731 148 aa4.44□□□□□ -1.7
UME1YPL139C YKL044WP36092 106 aa4.44□□□□□ -1.7
UME1YPL139C BET1P22804 142 aa4.43□□□□□ -1.7
UME1YPL139C MSA2P36157 363 aa4.43□□□□□ -1.7
UME1YPL139C HPA2Q06592 156 aa4.43□□□□□ -1.7
UME1YPL139C MSL1P40567 111 aaPredicted RBP4.42□□□□□ -1.7
UME1YPL139C KNH1P50112 268 aa4.42□□□□□ -1.7
UME1YPL139C YDL157CQ12082 118 aa4.42□□□□□ -1.7
UME1YPL139C RAD6P06104 172 aa4.41□□□□□ -1.7
UME1YPL139C YOR268CQ08734 132 aa4.41□□□□□ -1.7
UME1YPL139C YCR050CP25630 102 aa4.4□□□□□ -1.7
UME1YPL139C FYV12Q08559 129 aa4.4□□□□□ -1.7
UME1YPL139C YOR376W-AQ3E805 51 aa4.4□□□□□ -1.7
UME1YPL139C YJR085CP47131 105 aaKnown RBP4.39□□□□□ -1.71
UME1YPL139C NAT5Q08689 176 aa4.38□□□□□ -1.71
UME1YPL139C YOR034C-AQ3E735 80 aa4.38□□□□□ -1.71
UME1YPL139C COA6Q3E846 104 aa4.38□□□□□ -1.71
UME1YPL139C SPG1P50088 95 aa4.37□□□□□ -1.71
UME1YPL139C DDR2P89113 61 aa4.37□□□□□ -1.71
UME1YPL139C IRC21Q04772 201 aa4.37□□□□□ -1.71
UME1YPL139C YBR230W-AQ3E762 66 aa4.37□□□□□ -1.71
UME1YPL139C YMR230W-AQ3E7B5 62 aa4.37□□□□□ -1.71
UME1YPL139C YNL042W-BQ3E7Z2 85 aa4.37□□□□□ -1.71
UME1YPL139C RGM1Q00453 211 aa4.36□□□□□ -1.71
UME1YPL139C KSH1Q8TGJ3 72 aa4.36□□□□□ -1.71
UME1YPL139C KRE1P17260 313 aa4.35□□□□□ -1.71
UME1YPL139C ICY1Q04329 127 aa4.33□□□□□ -1.72
UME1YPL139C YJL127C-BQ3E828 52 aa4.33□□□□□ -1.72
UME1YPL139C YGR121W-AQ3E816 71 aa4.32□□□□□ -1.72
UME1YPL139C HOT13P36078 116 aa4.31□□□□□ -1.72
UME1YPL139C BSC4P53841 131 aa4.31□□□□□ -1.72
UME1YPL139C PAU17Q12370 124 aa4.31□□□□□ -1.72
UME1YPL139C FUN14P18411 198 aa4.3□□□□□ -1.72
UME1YPL139C ATP20Q12233 115 aa4.3□□□□□ -1.72
UME1YPL139C RPL26AP05743 127 aaKnown RBP4.29□□□□□ -1.72
UME1YPL139C RPL26BP53221 127 aaKnown RBP4.29□□□□□ -1.72
UME1YPL139C YHR007C-AQ07074 71 aa4.29□□□□□ -1.72
UME1YPL139C MIC10Q96VH5 97 aa4.29□□□□□ -1.72
UME1YPL139C INO4P13902 151 aa4.28□□□□□ -1.72
UME1YPL139C FYV5P25585 152 aa4.28□□□□□ -1.72
UME1YPL139C YHL042WP38729 150 aa4.28□□□□□ -1.72
UME1YPL139C YBR027CP38220 110 aa4.27□□□□□ -1.73
UME1YPL139C LIP1Q03579 150 aa4.27□□□□□ -1.73
UME1YPL139C TDA2P40045 126 aa4.26□□□□□ -1.73
UME1YPL139C YFL065CP43539 102 aa4.26□□□□□ -1.73
UME1YPL139C MPC3P53311 146 aa4.26□□□□□ -1.73
UME1YPL139C YPR203WQ08994 102 aa4.26□□□□□ -1.73
UME1YPL139C YLR236CA0A023PZG4 107 aa4.24□□□□□ -1.73
UME1YPL139C YOR072WQ08486 104 aa4.24□□□□□ -1.73
UME1YPL139C PAI3P01094 68 aa4.23□□□□□ -1.73
UME1YPL139C YEL045CP32616 141 aa4.22□□□□□ -1.73
UME1YPL139C YHR125WP38831 101 aa4.22□□□□□ -1.73
UME1YPL139C ECM19Q06011 112 aa4.22□□□□□ -1.73
UME1YPL139C QCR10P37299 77 aa4.21□□□□□ -1.74
UME1YPL139C YHL018WP38744 120 aaPredicted RBP4.21□□□□□ -1.74
UME1YPL139C YCR085WP25650 117 aa4.2□□□□□ -1.74
UME1YPL139C PAU23Q07987 124 aa4.2□□□□□ -1.74
UME1YPL139C RPL36BO14455 100 aaKnown RBP4.19□□□□□ -1.74
UME1YPL139C SOM1Q05676 74 aa4.19□□□□□ -1.74
UME1YPL139C YLR296WQ05898 108 aa4.19□□□□□ -1.74
UME1YPL139C YOR381W-AQ3E804 55 aa4.19□□□□□ -1.74
UME1YPL139C HUR1P45820 110 aa4.18□□□□□ -1.74
UME1YPL139C RSM19P53733 91 aaPredicted RBP4.18□□□□□ -1.74
UME1YPL139C YLR363W-AQ3E747 85 aa4.17□□□□□ -1.74
UME1YPL139C CMC4Q3E7A9 73 aa4.16□□□□□ -1.74
UME1YPL139C RPA12P32529 125 aaKnown RBP4.15□□□□□ -1.74
UME1YPL139C LSM6Q06406 86 aaKnown RBP4.15□□□□□ -1.74
UME1YPL139C DSE2P38844 325 aa4.14□□□□□ -1.75
UME1YPL139C RSM18P40033 138 aa4.14□□□□□ -1.75
UME1YPL139C YER187WP40102 141 aa4.14□□□□□ -1.75
UME1YPL139C YAL067W-AQ8TGK6 75 aa4.14□□□□□ -1.75
UME1YPL139C YHR032W-AP0C5N6 59 aa4.14□□□□□ -1.75
UME1YPL139C YCR043CP25361 127 aa4.14□□□□□ -1.75
UME1YPL139C NHP2P32495 156 aaPredicted RBP4.14□□□□□ -1.75
UME1YPL139C YER078W-AQ3E7A2 54 aa4.14□□□□□ -1.75
UME1YPL139C EMC6Q12431 108 aa4.12□□□□□ -1.75
UME1YPL139C RPL37BP51402 88 aaKnown RBP4.11□□□□□ -1.75
UME1YPL139C YDR119W-AQ2V2P9 66 aa4.1□□□□□ -1.75
UME1YPL139C YHL005CP38752 130 aa4.08□□□□□ -1.76
UME1YPL139C YFR009W-AP0C5M9 85 aa4.07□□□□□ -1.76
UME1YPL139C TOM6P33448 61 aa4.07□□□□□ -1.76
UME1YPL139C ATX1P38636 73 aa4.06□□□□□ -1.76
UME1YPL139C YNL198CP40166 100 aa4.06□□□□□ -1.76
UME1YPL139C YJR107C-AP0CT86 78 aa4.05□□□□□ -1.76
UME1YPL139C OST5Q92316 86 aa4.05□□□□□ -1.76
UME1YPL139C ATP18P81450 59 aa4.04□□□□□ -1.76
UME1YPL139C YIL102C-AQ2V2P5 75 aa4.04□□□□□ -1.76
UME1YPL139C YNL122CP53921 115 aaPredicted RBP4.02□□□□□ -1.77
UME1YPL139C YHR213W-BQ8TGK1 99 aa4.02□□□□□ -1.77
UME1YPL139C YPR153WQ06537 140 aa4.02□□□□□ -1.77
UME1YPL139C YLR162WQ06235 118 aa4.01□□□□□ -1.77
UME1YPL139C ICS3P47034 131 aa4□□□□□ -1.77
UME1YPL139C YJL133C-AQ3E7A3 74 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms