RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C GSC2P40989 1895 aa1.86□□□□□ -2.11
SSN8YNL025C PAU7P39545 55 aa1.86□□□□□ -2.11
SSN8YNL025C MRPS12P53732 153 aa1.86□□□□□ -2.11
SSN8YNL025C YNL122CP53921 115 aaPredicted RBP1.86□□□□□ -2.11
SSN8YNL025C MYO1P08964 1928 aa1.85□□□□□ -2.11
SSN8YNL025C YHR086W-AQ3E746 53 aa1.85□□□□□ -2.11
SSN8YNL025C NOP10Q6Q547 58 aaPredicted RBP1.85□□□□□ -2.11
SSN8YNL025C FIG2P25653 1609 aa1.84□□□□□ -2.11
SSN8YNL025C RIF1P29539 1916 aa1.84□□□□□ -2.11
SSN8YNL025C YMR007WQ03675 126 aa1.84□□□□□ -2.11
SSN8YNL025C YKL023C-AQ2V2P3 75 aa1.84□□□□□ -2.11
SSN8YNL025C YGR035W-AQ45U48 73 aa1.84□□□□□ -2.11
SSN8YNL025C FLO1P32768 1537 aa1.84□□□□□ -2.11
SSN8YNL025C YLR255CO13574 117 aa1.83□□□□□ -2.12
SSN8YNL025C YIL086CP40503 102 aa1.83□□□□□ -2.12
SSN8YNL025C MOT1P32333 1867 aa1.83□□□□□ -2.12
SSN8YNL025C ERI1P62651 68 aaKnown RBP1.82□□□□□ -2.12
SSN8YNL025C YDR182W-AQ3E796 67 aa1.82□□□□□ -2.12
SSN8YNL025C ECM29P38737 1868 aa1.82□□□□□ -2.12
SSN8YNL025C UBR2Q07963 1872 aa1.82□□□□□ -2.12
SSN8YNL025C SHU1P38751 150 aa1.81□□□□□ -2.12
SSN8YNL025C YIL156W-BQ2V2P4 73 aa1.81□□□□□ -2.12
SSN8YNL025C YNL042W-BQ3E7Z2 85 aa1.81□□□□□ -2.12
SSN8YNL025C YCR001WP25347 104 aa1.8□□□□□ -2.12
SSN8YNL025C YAR064WP39563 99 aa1.8□□□□□ -2.12
SSN8YNL025C YOL097W-AQ3E7Y9 61 aa1.8□□□□□ -2.12
SSN8YNL025C HUB1Q6Q546 73 aa1.8□□□□□ -2.12
SSN8YNL025C AQY2P0CD90 149 aa1.79□□□□□ -2.12
SSN8YNL025C LCL1Q02786 101 aa1.79□□□□□ -2.12
SSN8YNL025C MGR2Q02889 113 aa1.79□□□□□ -2.12
SSN8YNL025C YKL018C-AQ3E7A7 99 aa1.79□□□□□ -2.12
SSN8YNL025C MVB12P42939 101 aa1.78□□□□□ -2.12
SSN8YNL025C ATP17Q06405 101 aa1.78□□□□□ -2.12
SSN8YNL025C YDR246W-AQ3E763 66 aa1.78□□□□□ -2.12
SSN8YNL025C YMR122W-AQ3E842 84 aa1.78□□□□□ -2.12
SSN8YNL025C HUG1Q6Q5K6 68 aa1.78□□□□□ -2.12
SSN8YNL025C FAS1P07149 2051 aaKnown RBP1.78□□□□□ -2.13
SSN8YNL025C LAA1P39526 2014 aa1.78□□□□□ -2.13
SSN8YNL025C HKR1P41809 1802 aa1.77□□□□□ -2.13
SSN8YNL025C YHR212W-AP0CX91 67 aa1.77□□□□□ -2.13
SSN8YNL025C YMR141CP40211 102 aa1.77□□□□□ -2.13
SSN8YNL025C YIL102CP40488 101 aa1.77□□□□□ -2.13
SSN8YNL025C SGF11Q03067 99 aa1.77□□□□□ -2.13
SSN8YNL025C YBR201C-AQ2V2Q3 67 aa1.77□□□□□ -2.13
SSN8YNL025C ATP18P81450 59 aa1.76□□□□□ -2.13
SSN8YNL025C SLH1P53327 1967 aaKnown RBP1.76□□□□□ -2.13
SSN8YNL025C COX9P07255 59 aa1.75□□□□□ -2.13
SSN8YNL025C YDL022C-AP0C5L6 82 aa1.75□□□□□ -2.13
SSN8YNL025C YJR128WP47162 119 aa1.75□□□□□ -2.13
SSN8YNL025C COX7P10174 60 aa1.74□□□□□ -2.13
SSN8YNL025C SDH6Q3E785 79 aa1.74□□□□□ -2.13
SSN8YNL025C Q0032Q9ZZX7 96 aa1.74□□□□□ -2.13
SSN8YNL025C PMD1P32634 1753 aa1.74□□□□□ -2.13
SSN8YNL025C YOL013W-AP0C272 63 aaPredicted RBP1.73□□□□□ -2.13
SSN8YNL025C YOR032W-AQ8TGS1 66 aa1.72□□□□□ -2.13
SSN8YNL025C RPS30AP0CX33 63 aaKnown RBP1.71□□□□□ -2.14
SSN8YNL025C RPS30BP0CX34 63 aaKnown RBP1.71□□□□□ -2.14
SSN8YNL025C HHY1P39982 102 aa1.71□□□□□ -2.14
SSN8YNL025C STT4P37297 1900 aa1.7□□□□□ -2.14
SSN8YNL025C YLR146W-AQ2V2P1 62 aa1.7□□□□□ -2.14
SSN8YNL025C YBR072C-AQ3E794 53 aa1.7□□□□□ -2.14
SSN8YNL025C CDC39P25655 2108 aaKnown RBP1.69□□□□□ -2.14
SSN8YNL025C YJR107C-AP0CT86 78 aa1.69□□□□□ -2.14
SSN8YNL025C RPL38P49167 78 aaKnown RBP1.69□□□□□ -2.14
SSN8YNL025C YNL190WP53872 204 aa1.69□□□□□ -2.14
SSN8YNL025C YOR034C-AQ3E735 80 aa1.68□□□□□ -2.14
SSN8YNL025C YPR108W-AQ3E7B3 70 aa1.68□□□□□ -2.14
SSN8YNL025C YHR213W-BQ8TGK1 99 aa1.68□□□□□ -2.14
SSN8YNL025C YOL166W-AQ8TGJ1 51 aa1.67□□□□□ -2.14
SSN8YNL025C CYR1P08678 2026 aaKnown RBP1.66□□□□□ -2.14
SSN8YNL025C COA2Q3E823 68 aa1.65□□□□□ -2.15
SSN8YNL025C EDC1P53080 175 aaPredicted RBP1.64□□□□□ -2.15
SSN8YNL025C YOR011W-AQ3E807 68 aa1.64□□□□□ -2.15
SSN8YNL025C YMR001C-AQ8TGS9 76 aa1.63□□□□□ -2.15
SSN8YNL025C YBL039W-BP0C268 59 aa1.62□□□□□ -2.15
SSN8YNL025C RPC10P40422 70 aa1.62□□□□□ -2.15
SSN8YNL025C YOR192C-CQ3E736 78 aa1.61□□□□□ -2.15
SSN8YNL025C YBR200W-AQ3E755 54 aa1.61□□□□□ -2.15
SSN8YNL025C YLR157W-DP0CE99 70 aa1.6□□□□□ -2.15
SSN8YNL025C BRR2P32639 2163 aaKnown RBP1.58□□□□□ -2.16
SSN8YNL025C HUA1P40325 198 aa1.58□□□□□ -2.16
SSN8YNL025C FAB1P34756 2278 aa1.57□□□□□ -2.16
SSN8YNL025C OLI1P61829 76 aa1.57□□□□□ -2.16
SSN8YNL025C TOS6P48560 102 aa1.56□□□□□ -2.16
SSN8YNL025C YGR025WP53216 100 aa1.56□□□□□ -2.16
SSN8YNL025C YOR394C-AQ8TGJ0 55 aa1.56□□□□□ -2.16
SSN8YNL025C YBR230W-AQ3E762 66 aa1.55□□□□□ -2.16
SSN8YNL025C ACC1Q00955 2233 aaKnown RBP1.55□□□□□ -2.16
SSN8YNL025C NCE101Q02820 53 aa1.54□□□□□ -2.16
SSN8YNL025C YGL258W-AQ3E740 77 aa1.54□□□□□ -2.16
SSN8YNL025C AUA1P32450 94 aa1.53□□□□□ -2.16
SSN8YNL025C YLR342W-AQ3E810 57 aa1.52□□□□□ -2.17
SSN8YNL025C RPL43AP0CX25 92 aaKnown RBP1.51□□□□□ -2.17
SSN8YNL025C RPL43BP0CX26 92 aa1.51□□□□□ -2.17
SSN8YNL025C TOM7P53507 60 aa1.51□□□□□ -2.17
SSN8YNL025C BPH1P25356 2167 aa1.5□□□□□ -2.17
SSN8YNL025C YOR008C-AQ3E7B9 74 aa1.48□□□□□ -2.17
SSN8YNL025C RPS27AP35997 82 aaKnown RBP1.47□□□□□ -2.17
SSN8YNL025C SEC16P48415 2195 aaKnown RBP1.47□□□□□ -2.17
SSN8YNL025C YPR010C-AA5Z2X5 72 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms