RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W ESC1Q03661 1658 aaKnown RBP1.08□□□□□ -2.24
YML040WYML040W BCK1Q01389 1478 aa1.07□□□□□ -2.24
YML040WYML040W TY1B-BRQ12193 1756 aa1.07□□□□□ -2.24
YML040WYML040W TY1B-GR3Q12316 1755 aa1.07□□□□□ -2.24
YML040WYML040W TY1B-ORQ92393 1755 aa1.07□□□□□ -2.24
YML040WYML040W RPA190P10964 1664 aaKnown RBP1.07□□□□□ -2.24
YML040WYML040W DOP1Q03921 1698 aa1.07□□□□□ -2.24
YML040WYML040W YOR093CQ12275 1648 aa1.06□□□□□ -2.24
YML040WYML040W TY1B-JR2P47100 1755 aaKnown RBP1.06□□□□□ -2.24
YML040WYML040W TY1B-ER2Q03619 1755 aa1.06□□□□□ -2.24
YML040WYML040W TY1B-MR1Q04214 1755 aa1.06□□□□□ -2.24
YML040WYML040W TY1B-MR2Q04670 1755 aaKnown RBP1.06□□□□□ -2.24
YML040WYML040W TY1B-LR1Q12088 1755 aaKnown RBP1.06□□□□□ -2.24
YML040WYML040W TY1B-NL1Q12112 1755 aa1.06□□□□□ -2.24
YML040WYML040W TY1B-GR1Q12141 1755 aa1.06□□□□□ -2.24
YML040WYML040W TY1B-BLQ12490 1755 aa1.06□□□□□ -2.24
YML040WYML040W MLP1Q02455 1875 aaKnown RBP1.06□□□□□ -2.24
YML040WYML040W YDR042CQ03205 200 aa1.06□□□□□ -2.24
YML040WYML040W YIL102C-AQ2V2P5 75 aa1.06□□□□□ -2.24
YML040WYML040W SPO14P36126 1683 aa1.05□□□□□ -2.24
YML040WYML040W YRF1-2P40105 1681 aa1.05□□□□□ -2.24
YML040WYML040W YCR085WP25650 117 aa1.05□□□□□ -2.24
YML040WYML040W TOM6P33448 61 aa1.05□□□□□ -2.24
YML040WYML040W YNL198CP40166 100 aa1.05□□□□□ -2.24
YML040WYML040W YNL190WP53872 204 aa1.05□□□□□ -2.24
YML040WYML040W VMR1P38735 1592 aa1.04□□□□□ -2.24
YML040WYML040W NUP188P52593 1655 aaKnown RBP1.04□□□□□ -2.24
YML040WYML040W YOR105WQ08504 108 aa1.04□□□□□ -2.24
YML040WYML040W YFL041W-AQ3E817 63 aa1.04□□□□□ -2.24
YML040WYML040W TY1B-NL2Q99337 1749 aaKnown RBP1.04□□□□□ -2.24
YML040WYML040W BUD3P25558 1636 aa1.03□□□□□ -2.24
YML040WYML040W YMR082CQ04276 118 aa1.03□□□□□ -2.24
YML040WYML040W DNF3Q12674 1656 aa1.03□□□□□ -2.25
YML040WYML040W YKL023C-AQ2V2P3 75 aa1.02□□□□□ -2.25
YML040WYML040W YDR381C-AQ3E6R5 114 aa1.02□□□□□ -2.25
YML040WYML040W IML1P47170 1584 aa1.01□□□□□ -2.25
YML040WYML040W YBT1P32386 1661 aa1.01□□□□□ -2.25
YML040WYML040W FPR2P32472 135 aa1.01□□□□□ -2.25
YML040WYML040W YSY6P38374 65 aa1.01□□□□□ -2.25
YML040WYML040W POC4Q12245 148 aaPredicted RBP1.01□□□□□ -2.25
YML040WYML040W RIM15P43565 1770 aa1.01□□□□□ -2.25
YML040WYML040W NUP192P47054 1683 aa1□□□□□ -2.25
YML040WYML040W QCR9P22289 66 aa1□□□□□ -2.25
YML040WYML040W PAU7P39545 55 aa1□□□□□ -2.25
YML040WYML040W YDR119W-AQ2V2P9 66 aa1□□□□□ -2.25
YML040WYML040W COX9P07255 59 aa0.99□□□□□ -2.25
YML040WYML040W YHR214C-DP0CX93 97 aa0.99□□□□□ -2.25
YML040WYML040W TIM12P32830 109 aa0.99□□□□□ -2.25
YML040WYML040W YOR343CQ12484 108 aa0.99□□□□□ -2.25
YML040WYML040W MOT1P32333 1867 aa0.98□□□□□ -2.25
YML040WYML040W FKS3Q04952 1785 aa0.98□□□□□ -2.25
YML040WYML040W YKL065W-AQ2V2P2 73 aa0.98□□□□□ -2.25
YML040WYML040W YNL042W-BQ3E7Z2 85 aa0.98□□□□□ -2.25
YML040WYML040W Q0032Q9ZZX7 96 aa0.98□□□□□ -2.25
YML040WYML040W YJR107C-AP0CT86 78 aa0.97□□□□□ -2.25
YML040WYML040W YOR314WQ12506 109 aa0.97□□□□□ -2.25
YML040WYML040W HUB1Q6Q546 73 aa0.97□□□□□ -2.25
YML040WYML040W RPL38P49167 78 aaKnown RBP0.96□□□□□ -2.26
YML040WYML040W BSC4P53841 131 aa0.96□□□□□ -2.26
YML040WYML040W YMR175W-AQ3E766 64 aa0.96□□□□□ -2.26
YML040WYML040W YKL018C-AQ3E7A7 99 aa0.96□□□□□ -2.26
YML040WYML040W COA2Q3E823 68 aa0.96□□□□□ -2.26
YML040WYML040W ECM29P38737 1868 aa0.96□□□□□ -2.26
YML040WYML040W APC1P53886 1748 aa0.96□□□□□ -2.26
YML040WYML040W SPI1P40092 148 aa0.95□□□□□ -2.26
YML040WYML040W ERI1P62651 68 aaKnown RBP0.95□□□□□ -2.26
YML040WYML040W YDR182W-AQ3E796 67 aa0.95□□□□□ -2.26
YML040WYML040W YAL065CO13511 128 aa0.94□□□□□ -2.26
YML040WYML040W RPS30AP0CX33 63 aaKnown RBP0.94□□□□□ -2.26
YML040WYML040W RPS30BP0CX34 63 aaKnown RBP0.94□□□□□ -2.26
YML040WYML040W YBR201C-AQ2V2Q3 67 aa0.94□□□□□ -2.26
YML040WYML040W YOR008C-AQ3E7B9 74 aa0.94□□□□□ -2.26
YML040WYML040W TOM7P53507 60 aa0.93□□□□□ -2.26
YML040WYML040W SGF11Q03067 99 aa0.93□□□□□ -2.26
YML040WYML040W YOR192C-CQ3E736 78 aa0.93□□□□□ -2.26
YML040WYML040W YGL258W-AQ3E740 77 aa0.93□□□□□ -2.26
YML040WYML040W SDH6Q3E785 79 aa0.93□□□□□ -2.26
YML040WYML040W YGR121W-AQ3E816 71 aa0.93□□□□□ -2.26
YML040WYML040W HKR1P41809 1802 aa0.93□□□□□ -2.26
YML040WYML040W YLR157W-DP0CE99 70 aa0.92□□□□□ -2.26
YML040WYML040W TOS6P48560 102 aa0.92□□□□□ -2.26
YML040WYML040W YPR108W-AQ3E7B3 70 aa0.92□□□□□ -2.26
YML040WYML040W NOP10Q6Q547 58 aaPredicted RBP0.92□□□□□ -2.26
YML040WYML040W PMD1P32634 1753 aa0.92□□□□□ -2.26
YML040WYML040W EDC1P53080 175 aaPredicted RBP0.91□□□□□ -2.26
YML040WYML040W ATP18P81450 59 aa0.91□□□□□ -2.26
YML040WYML040W ATP17Q06405 101 aa0.91□□□□□ -2.26
YML040WYML040W YLR342W-AQ3E810 57 aa0.91□□□□□ -2.26
YML040WYML040W YGR035W-AQ45U48 73 aa0.91□□□□□ -2.26
YML040WYML040W YOR032W-AQ8TGS1 66 aa0.91□□□□□ -2.26
YML040WYML040W YMR001C-AQ8TGS9 76 aa0.91□□□□□ -2.26
YML040WYML040W YDL022C-AP0C5L6 82 aa0.9□□□□□ -2.26
YML040WYML040W YIL156W-BQ2V2P4 73 aa0.9□□□□□ -2.26
YML040WYML040W YDR246W-AQ3E763 66 aa0.9□□□□□ -2.26
YML040WYML040W FLO1P32768 1537 aa0.9□□□□□ -2.27
YML040WYML040W STT4P37297 1900 aa0.9□□□□□ -2.27
YML040WYML040W YPR010C-AA5Z2X5 72 aa0.89□□□□□ -2.27
YML040WYML040W SIP18P50263 79 aa0.89□□□□□ -2.27
YML040WYML040W YOL166W-AQ8TGJ1 51 aa0.89□□□□□ -2.27
YML040WYML040W COX7P10174 60 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms