RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C PBI2P0CT04 75 aaKnown RBP6.48□□□□□ -1.37
SHB17YKR043C RPL26BP53221 127 aaKnown RBP6.48□□□□□ -1.37
SHB17YKR043C IRC21Q04772 201 aa6.48□□□□□ -1.37
SHB17YKR043C YDR010CQ12426 110 aa6.47□□□□□ -1.37
SHB17YKR043C YDR381C-AQ3E6R5 114 aa6.47□□□□□ -1.37
SHB17YKR043C YHR139C-AO13536 103 aa6.46□□□□□ -1.38
SHB17YKR043C ICY1Q04329 127 aa6.46□□□□□ -1.38
SHB17YKR043C YNL042W-BQ3E7Z2 85 aa6.46□□□□□ -1.38
SHB17YKR043C MSA2P36157 363 aa6.45□□□□□ -1.38
SHB17YKR043C YGL149WP53116 101 aa6.45□□□□□ -1.38
SHB17YKR043C YLR156WP0CE96 114 aa6.44□□□□□ -1.38
SHB17YKR043C YLR159WP0CE97 114 aa6.44□□□□□ -1.38
SHB17YKR043C YLR161WP0CE98 114 aa6.44□□□□□ -1.38
SHB17YKR043C DDR2P89113 61 aa6.44□□□□□ -1.38
SHB17YKR043C YBR230W-AQ3E762 66 aa6.44□□□□□ -1.38
SHB17YKR043C EDC2P40023 145 aaPredicted RBP6.43□□□□□ -1.38
SHB17YKR043C YPL080CQ02826 108 aa6.43□□□□□ -1.38
SHB17YKR043C RAD6P06104 172 aa6.42□□□□□ -1.38
SHB17YKR043C YGR039WP53225 103 aa6.41□□□□□ -1.38
SHB17YKR043C YDR119W-AQ2V2P9 66 aa6.41□□□□□ -1.38
SHB17YKR043C YOR034C-AQ3E735 80 aa6.41□□□□□ -1.38
SHB17YKR043C YJL127C-BQ3E828 52 aa6.41□□□□□ -1.38
SHB17YKR043C SPT4P32914 102 aaPredicted RBP6.4□□□□□ -1.38
SHB17YKR043C COF1Q03048 143 aaKnown RBP6.4□□□□□ -1.38
SHB17YKR043C YOR268CQ08734 132 aa6.4□□□□□ -1.38
SHB17YKR043C YIR021W-AQ3E739 70 aa6.4□□□□□ -1.38
SHB17YKR043C YHL042WP38729 150 aa6.39□□□□□ -1.39
SHB17YKR043C YLR236CA0A023PZG4 107 aa6.38□□□□□ -1.39
SHB17YKR043C SPG1P50088 95 aa6.38□□□□□ -1.39
SHB17YKR043C SHH4Q06236 168 aa6.38□□□□□ -1.39
SHB17YKR043C EMC6Q12431 108 aa6.38□□□□□ -1.39
SHB17YKR043C YGR121W-AQ3E816 71 aa6.38□□□□□ -1.39
SHB17YKR043C FYV5P25585 152 aa6.37□□□□□ -1.39
SHB17YKR043C YJR085CP47131 105 aaKnown RBP6.36□□□□□ -1.39
SHB17YKR043C YJR107C-AP0CT86 78 aa6.34□□□□□ -1.39
SHB17YKR043C YKL069WP36088 180 aa6.33□□□□□ -1.4
SHB17YKR043C BSC4P53841 131 aa6.33□□□□□ -1.4
SHB17YKR043C YPL038W-AQ3E7B4 63 aa6.33□□□□□ -1.4
SHB17YKR043C YJL197C-AP0C5P0 93 aa6.31□□□□□ -1.4
SHB17YKR043C YHR007C-AQ07074 71 aa6.31□□□□□ -1.4
SHB17YKR043C YSY6P38374 65 aa6.29□□□□□ -1.4
SHB17YKR043C MPC3P53311 146 aa6.29□□□□□ -1.4
SHB17YKR043C TOM6P33448 61 aa6.28□□□□□ -1.4
SHB17YKR043C ATP18P81450 59 aa6.27□□□□□ -1.41
SHB17YKR043C YOR072WQ08486 104 aa6.27□□□□□ -1.41
SHB17YKR043C YMR230W-AQ3E7B5 62 aa6.27□□□□□ -1.41
SHB17YKR043C BET1P22804 142 aa6.26□□□□□ -1.41
SHB17YKR043C YHL018WP38744 120 aaPredicted RBP6.25□□□□□ -1.41
SHB17YKR043C YLR285C-AQ3E771 56 aa6.24□□□□□ -1.41
SHB17YKR043C TSC3Q3E790 80 aa6.24□□□□□ -1.41
SHB17YKR043C KTI11Q3E840 82 aa6.24□□□□□ -1.41
SHB17YKR043C RPL36BO14455 100 aaKnown RBP6.23□□□□□ -1.41
SHB17YKR043C SFT1P43682 97 aa6.23□□□□□ -1.41
SHB17YKR043C RSM19P53733 91 aaPredicted RBP6.23□□□□□ -1.41
SHB17YKR043C KSH1Q8TGJ3 72 aa6.21□□□□□ -1.42
SHB17YKR043C YBR027CP38220 110 aa6.2□□□□□ -1.42
SHB17YKR043C YLR361C-AQ3E795 98 aa6.19□□□□□ -1.42
SHB17YKR043C YFR009W-AP0C5M9 85 aa6.17□□□□□ -1.42
SHB17YKR043C EDC1P53080 175 aaPredicted RBP6.17□□□□□ -1.42
SHB17YKR043C TDA2P40045 126 aa6.16□□□□□ -1.42
SHB17YKR043C YKL183C-AQ3E765 70 aa6.16□□□□□ -1.42
SHB17YKR043C HOT13P36078 116 aa6.15□□□□□ -1.42
SHB17YKR043C YER187WP40102 141 aa6.15□□□□□ -1.42
SHB17YKR043C RPL38P49167 78 aaKnown RBP6.14□□□□□ -1.43
SHB17YKR043C RSM18P40033 138 aa6.11□□□□□ -1.43
SHB17YKR043C ATP20Q12233 115 aa6.1□□□□□ -1.43
SHB17YKR043C YCR050CP25630 102 aa6.09□□□□□ -1.43
SHB17YKR043C ICS3P47034 131 aa6.09□□□□□ -1.43
SHB17YKR043C YDR246W-AQ3E763 66 aa6.09□□□□□ -1.43
SHB17YKR043C TDA8Q6B2U8 126 aa6.09□□□□□ -1.43
SHB17YKR043C AIM4P38305 123 aaPredicted RBP6.08□□□□□ -1.44
SHB17YKR043C CMC4Q3E7A9 73 aa6.08□□□□□ -1.44
SHB17YKR043C YOR314WQ12506 109 aa6.07□□□□□ -1.44
SHB17YKR043C COX23P38824 151 aa6.06□□□□□ -1.44
SHB17YKR043C YHR213W-BQ8TGK1 99 aa6.03□□□□□ -1.44
SHB17YKR043C YHL005CP38752 130 aa6.02□□□□□ -1.45
SHB17YKR043C SBH1P52870 82 aa6.02□□□□□ -1.45
SHB17YKR043C YDR182W-AQ3E796 67 aa6.01□□□□□ -1.45
SHB17YKR043C NOP10Q6Q547 58 aaPredicted RBP6□□□□□ -1.45
SHB17YKR043C YLR157W-DP0CE99 70 aa5.99□□□□□ -1.45
SHB17YKR043C YOL014WQ08110 124 aa5.99□□□□□ -1.45
SHB17YKR043C YJL133C-AQ3E7A3 74 aa5.98□□□□□ -1.45
SHB17YKR043C YOL097W-AQ3E7Y9 61 aa5.98□□□□□ -1.45
SHB17YKR043C ECM19Q06011 112 aa5.97□□□□□ -1.45
SHB17YKR043C YLR162WQ06235 118 aa5.97□□□□□ -1.45
SHB17YKR043C MIC10Q96VH5 97 aa5.97□□□□□ -1.45
SHB17YKR043C RPL36AP05745 100 aaPredicted RBP5.96□□□□□ -1.46
SHB17YKR043C YEL045CP32616 141 aa5.95□□□□□ -1.46
SHB17YKR043C YOL166W-AQ8TGJ1 51 aa5.92□□□□□ -1.46
SHB17YKR043C YBR182C-AQ8TGU6 64 aa5.9□□□□□ -1.46
SHB17YKR043C COX7P10174 60 aa5.89□□□□□ -1.47
SHB17YKR043C YNL122CP53921 115 aaPredicted RBP5.89□□□□□ -1.47
SHB17YKR043C YBR121C-AP0C5L4 52 aa5.86□□□□□ -1.47
SHB17YKR043C LIP1Q03579 150 aa5.86□□□□□ -1.47
SHB17YKR043C YIL102CP40488 101 aa5.85□□□□□ -1.47
SHB17YKR043C YGR164WP53291 111 aa5.85□□□□□ -1.47
SHB17YKR043C YLR412C-AQ3E742 68 aa5.85□□□□□ -1.47
SHB17YKR043C RPL37BP51402 88 aaKnown RBP5.84□□□□□ -1.47
SHB17YKR043C RPS28BP0C0X0 67 aaKnown RBP5.83□□□□□ -1.48
SHB17YKR043C YCR043CP25361 127 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms