RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W MRX7P53869 86 aa1.34□□□□□ -2.2
NUP100YKL068W IRC21Q04772 201 aa1.34□□□□□ -2.2
NUP100YKL068W YNL146C-AQ3E7Z1 64 aa1.34□□□□□ -2.2
NUP100YKL068W MHF2Q3E829 80 aa1.34□□□□□ -2.2
NUP100YKL068W PAU6P0CE90 120 aa1.33□□□□□ -2.2
NUP100YKL068W PAU18P0CE91 120 aa1.33□□□□□ -2.2
NUP100YKL068W YBL071CP38185 102 aa1.33□□□□□ -2.2
NUP100YKL068W YBR292CP38357 123 aa1.33□□□□□ -2.2
NUP100YKL068W LCL2Q08045 131 aa1.33□□□□□ -2.2
NUP100YKL068W YPL038W-AQ3E7B4 63 aa1.33□□□□□ -2.2
NUP100YKL068W YOL131WQ08270 108 aa1.33□□□□□ -2.2
NUP100YKL068W SSS1P35179 80 aa1.32□□□□□ -2.2
NUP100YKL068W SNA2P56508 79 aa1.32□□□□□ -2.2
NUP100YKL068W YER188C-AP0C0V2 99 aa1.31□□□□□ -2.2
NUP100YKL068W PDX3P38075 228 aaKnown RBP1.31□□□□□ -2.2
NUP100YKL068W ATX1P38636 73 aa1.31□□□□□ -2.2
NUP100YKL068W YOR314WQ12506 109 aa1.31□□□□□ -2.2
NUP100YKL068W YAL065CO13511 128 aa1.31□□□□□ -2.2
NUP100YKL068W YGL041C-BQ3E750 60 aa1.31□□□□□ -2.2
NUP100YKL068W YGR121W-AQ3E816 71 aa1.31□□□□□ -2.2
NUP100YKL068W YFL041W-AQ3E817 63 aa1.31□□□□□ -2.2
NUP100YKL068W YLR255CO13574 117 aa1.3□□□□□ -2.2
NUP100YKL068W YNL198CP40166 100 aa1.3□□□□□ -2.2
NUP100YKL068W PAU23Q07987 124 aa1.3□□□□□ -2.2
NUP100YKL068W PAU17Q12370 124 aa1.3□□□□□ -2.2
NUP100YKL068W MPC2P38857 129 aa1.3□□□□□ -2.2
NUP100YKL068W YGR240C-AQ3E786 66 aa1.3□□□□□ -2.2
NUP100YKL068W YNR034W-AQ3E841 98 aa1.3□□□□□ -2.2
NUP100YKL068W RPS11AP0CX47 156 aaKnown RBP1.29□□□□□ -2.2
NUP100YKL068W RPS11BP0CX48 156 aaKnown RBP1.29□□□□□ -2.2
NUP100YKL068W YNL122CP53921 115 aaPredicted RBP1.29□□□□□ -2.2
NUP100YKL068W TIM12P32830 109 aa1.29□□□□□ -2.2
NUP100YKL068W COX12Q01519 83 aa1.29□□□□□ -2.2
NUP100YKL068W YKL065W-AQ2V2P2 73 aa1.29□□□□□ -2.2
NUP100YKL068W PAU8P0CE92 120 aa1.28□□□□□ -2.2
NUP100YKL068W PAU11P0CE93 120 aa1.28□□□□□ -2.2
NUP100YKL068W PAU13P38725 120 aa1.28□□□□□ -2.2
NUP100YKL068W PAU4P53427 120 aa1.28□□□□□ -2.2
NUP100YKL068W BSC4P53841 131 aa1.28□□□□□ -2.2
NUP100YKL068W PAU10Q03050 120 aa1.28□□□□□ -2.2
NUP100YKL068W YOR105WQ08504 108 aa1.28□□□□□ -2.2
NUP100YKL068W YIL156W-BQ2V2P4 73 aa1.28□□□□□ -2.2
NUP100YKL068W PAU9Q3E770 120 aa1.28□□□□□ -2.2
NUP100YKL068W YHR212W-AP0CX91 67 aa1.28□□□□□ -2.2
NUP100YKL068W AIM19P40502 157 aa1.28□□□□□ -2.2
NUP100YKL068W YJL009WP47078 108 aa1.27□□□□□ -2.21
NUP100YKL068W YDR010CQ12426 110 aa1.27□□□□□ -2.21
NUP100YKL068W COX19Q3E731 98 aa1.27□□□□□ -2.21
NUP100YKL068W PAU1P0CE88 120 aa1.26□□□□□ -2.21
NUP100YKL068W PAU14P0CE89 120 aa1.26□□□□□ -2.21
NUP100YKL068W NOP10Q6Q547 58 aaPredicted RBP1.26□□□□□ -2.21
NUP100YKL068W MRPL31P14063 131 aaPredicted RBP1.26□□□□□ -2.21
NUP100YKL068W YIL134C-AQ45U18 67 aa1.26□□□□□ -2.21
NUP100YKL068W LCL1Q02786 101 aa1.26□□□□□ -2.21
NUP100YKL068W VMA9Q3E7B6 73 aa1.26□□□□□ -2.21
NUP100YKL068W QCR9P22289 66 aa1.25□□□□□ -2.21
NUP100YKL068W AQY2P0CD90 149 aa1.25□□□□□ -2.21
NUP100YKL068W YHR173CP38864 112 aa1.25□□□□□ -2.21
NUP100YKL068W YDR246W-AQ3E763 66 aa1.25□□□□□ -2.21
NUP100YKL068W PAU20Q08322 120 aa1.24□□□□□ -2.21
NUP100YKL068W YDL022C-AP0C5L6 82 aa1.24□□□□□ -2.21
NUP100YKL068W SPI1P40092 148 aa1.24□□□□□ -2.21
NUP100YKL068W BPH1P25356 2167 aa1.23□□□□□ -2.21
NUP100YKL068W ERI1P62651 68 aaKnown RBP1.23□□□□□ -2.21
NUP100YKL068W YIL102C-AQ2V2P5 75 aa1.23□□□□□ -2.21
NUP100YKL068W YAR064WP39563 99 aa1.22□□□□□ -2.21
NUP100YKL068W FPR2P32472 135 aa1.22□□□□□ -2.21
NUP100YKL068W MGR2Q02889 113 aa1.22□□□□□ -2.21
NUP100YKL068W YOL013W-AP0C272 63 aaPredicted RBP1.22□□□□□ -2.21
NUP100YKL068W YCR001WP25347 104 aa1.22□□□□□ -2.21
NUP100YKL068W YMR122W-AQ3E842 84 aa1.21□□□□□ -2.22
NUP100YKL068W AUA1P32450 94 aa1.21□□□□□ -2.22
NUP100YKL068W SHU1P38751 150 aa1.21□□□□□ -2.22
NUP100YKL068W YOR072WQ08486 104 aa1.21□□□□□ -2.22
NUP100YKL068W HUG1Q6Q5K6 68 aa1.2□□□□□ -2.22
NUP100YKL068W YNL042W-BQ3E7Z2 85 aa1.2□□□□□ -2.22
NUP100YKL068W YSY6P38374 65 aa1.18□□□□□ -2.22
NUP100YKL068W YMR007WQ03675 126 aa1.18□□□□□ -2.22
NUP100YKL068W YBR201C-AQ2V2Q3 67 aa1.18□□□□□ -2.22
NUP100YKL068W RPS29AP41057 56 aaKnown RBP1.17□□□□□ -2.22
NUP100YKL068W YJR128WP47162 119 aa1.17□□□□□ -2.22
NUP100YKL068W YKL018C-AQ3E7A7 99 aa1.17□□□□□ -2.22
NUP100YKL068W PAU7P39545 55 aa1.16□□□□□ -2.22
NUP100YKL068W MVB12P42939 101 aa1.16□□□□□ -2.22
NUP100YKL068W Q0032Q9ZZX7 96 aa1.16□□□□□ -2.22
NUP100YKL068W ATP17Q06405 101 aa1.14□□□□□ -2.23
NUP100YKL068W YKL023C-AQ2V2P3 75 aa1.14□□□□□ -2.23
NUP100YKL068W YOR034C-AQ3E735 80 aa1.14□□□□□ -2.23
NUP100YKL068W YIL102CP40488 101 aa1.14□□□□□ -2.23
NUP100YKL068W ATP18P81450 59 aa1.14□□□□□ -2.23
NUP100YKL068W YNL190WP53872 204 aa1.14□□□□□ -2.23
NUP100YKL068W SGF11Q03067 99 aa1.13□□□□□ -2.23
NUP100YKL068W YDR182W-AQ3E796 67 aa1.13□□□□□ -2.23
NUP100YKL068W EDC1P53080 175 aaPredicted RBP1.12□□□□□ -2.23
NUP100YKL068W COX7P10174 60 aa1.12□□□□□ -2.23
NUP100YKL068W HHY1P39982 102 aa1.12□□□□□ -2.23
NUP100YKL068W HUA1P40325 198 aa1.12□□□□□ -2.23
NUP100YKL068W RPS30AP0CX33 63 aaKnown RBP1.11□□□□□ -2.23
NUP100YKL068W RPS30BP0CX34 63 aaKnown RBP1.11□□□□□ -2.23
NUP100YKL068W YOL166W-AQ8TGJ1 51 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 74.8 ms