RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C YBR072C-AQ3E794 53 aa0.8□□□□□ -2.28
CTK2YJL006C MRP17P28778 131 aa0.79□□□□□ -2.28
CTK2YJL006C MPC2P38857 129 aa0.79□□□□□ -2.28
CTK2YJL006C MRX7P53869 86 aa0.79□□□□□ -2.28
CTK2YJL006C YDR010CQ12426 110 aa0.79□□□□□ -2.28
CTK2YJL006C AUA1P32450 94 aa0.78□□□□□ -2.28
CTK2YJL006C MSL1P40567 111 aaPredicted RBP0.78□□□□□ -2.28
CTK2YJL006C HMRA1P0CY11 126 aa0.77□□□□□ -2.29
CTK2YJL006C YBL071CP38185 102 aa0.77□□□□□ -2.29
CTK2YJL006C YBR292CP38357 123 aa0.77□□□□□ -2.29
CTK2YJL006C PAU6P0CE90 120 aa0.76□□□□□ -2.29
CTK2YJL006C PAU18P0CE91 120 aa0.76□□□□□ -2.29
CTK2YJL006C ICY1Q04329 127 aa0.76□□□□□ -2.29
CTK2YJL006C AIM19P40502 157 aa0.75□□□□□ -2.29
CTK2YJL006C PAU20Q08322 120 aa0.75□□□□□ -2.29
CTK2YJL006C YNR034W-AQ3E841 98 aa0.75□□□□□ -2.29
CTK2YJL006C SUS1Q6WNK7 96 aa0.75□□□□□ -2.29
CTK2YJL006C SNU13P39990 126 aaKnown RBP0.74□□□□□ -2.29
CTK2YJL006C RSM18P40033 138 aa0.74□□□□□ -2.29
CTK2YJL006C RRT15Q3E811 62 aa0.74□□□□□ -2.29
CTK2YJL006C PAU1P0CE88 120 aa0.73□□□□□ -2.29
CTK2YJL006C PAU14P0CE89 120 aa0.73□□□□□ -2.29
CTK2YJL006C PAU8P0CE92 120 aa0.73□□□□□ -2.29
CTK2YJL006C PAU11P0CE93 120 aa0.73□□□□□ -2.29
CTK2YJL006C MRPL38P35996 138 aaPredicted RBP0.73□□□□□ -2.29
CTK2YJL006C PAU13P38725 120 aa0.73□□□□□ -2.29
CTK2YJL006C PAU10Q03050 120 aa0.73□□□□□ -2.29
CTK2YJL006C NHP10Q03435 203 aa0.73□□□□□ -2.29
CTK2YJL006C YDR029WQ12111 104 aa0.73□□□□□ -2.29
CTK2YJL006C PAU9Q3E770 120 aa0.73□□□□□ -2.29
CTK2YJL006C RPS11AP0CX47 156 aaKnown RBP0.72□□□□□ -2.29
CTK2YJL006C RPS11BP0CX48 156 aaKnown RBP0.72□□□□□ -2.29
CTK2YJL006C SPC1P46965 94 aa0.72□□□□□ -2.29
CTK2YJL006C PAU4P53427 120 aa0.72□□□□□ -2.29
CTK2YJL006C YCL001W-BQ96VH2 84 aa0.72□□□□□ -2.29
CTK2YJL006C YOL164W-AQ3E7A5 60 aa0.71□□□□□ -2.3
CTK2YJL006C YCR075W-AQ3E830 75 aa0.71□□□□□ -2.3
CTK2YJL006C YDR042CQ03205 200 aa0.7□□□□□ -2.3
CTK2YJL006C MHF2Q3E829 80 aa0.7□□□□□ -2.3
CTK2YJL006C YGR035W-AQ45U48 73 aa0.7□□□□□ -2.3
CTK2YJL006C RPS29BP41058 56 aaKnown RBP0.69□□□□□ -2.3
CTK2YJL006C RPA12P32529 125 aaKnown RBP0.68□□□□□ -2.3
CTK2YJL006C BSC4P53841 131 aa0.68□□□□□ -2.3
CTK2YJL006C ECM12O13529 151 aa0.67□□□□□ -2.3
CTK2YJL006C PDX3P38075 228 aaKnown RBP0.67□□□□□ -2.3
CTK2YJL006C YMR082CQ04276 118 aa0.66□□□□□ -2.3
CTK2YJL006C YNL042W-BQ3E7Z2 85 aa0.65□□□□□ -2.31
CTK2YJL006C COX7P10174 60 aa0.64□□□□□ -2.31
CTK2YJL006C NHP2P32495 156 aaPredicted RBP0.64□□□□□ -2.31
CTK2YJL006C YNL198CP40166 100 aa0.64□□□□□ -2.31
CTK2YJL006C YNL190WP53872 204 aa0.64□□□□□ -2.31
CTK2YJL006C SCP1Q08873 200 aa0.64□□□□□ -2.31
CTK2YJL006C Q0032Q9ZZX7 96 aa0.64□□□□□ -2.31
CTK2YJL006C RPC10P40422 70 aa0.63□□□□□ -2.31
CTK2YJL006C RPL38P49167 78 aaKnown RBP0.63□□□□□ -2.31
CTK2YJL006C YGL194C-AQ2V2P6 80 aa0.62□□□□□ -2.31
CTK2YJL006C YHR214C-DP0CX93 97 aa0.61□□□□□ -2.31
CTK2YJL006C YBR201C-AQ2V2Q3 67 aa0.61□□□□□ -2.31
CTK2YJL006C TOM6P33448 61 aa0.6□□□□□ -2.31
CTK2YJL006C YAL065CO13511 128 aa0.59□□□□□ -2.31
CTK2YJL006C YJR107C-AP0CT86 78 aa0.59□□□□□ -2.31
CTK2YJL006C FPR2P32472 135 aa0.59□□□□□ -2.31
CTK2YJL006C RPS29AP41057 56 aaKnown RBP0.59□□□□□ -2.31
CTK2YJL006C YMR175W-AQ3E766 64 aa0.59□□□□□ -2.31
CTK2YJL006C ATX1P38636 73 aa0.58□□□□□ -2.32
CTK2YJL006C YOR343CQ12484 108 aa0.58□□□□□ -2.32
CTK2YJL006C YKL068W-AQ3E826 78 aa0.58□□□□□ -2.32
CTK2YJL006C YMR122W-AQ3E842 84 aa0.58□□□□□ -2.32
CTK2YJL006C ATP18P81450 59 aa0.57□□□□□ -2.32
CTK2YJL006C PAU23Q07987 124 aa0.57□□□□□ -2.32
CTK2YJL006C PAU17Q12370 124 aa0.57□□□□□ -2.32
CTK2YJL006C YFR009W-AP0C5M9 85 aa0.55□□□□□ -2.32
CTK2YJL006C YOR032W-AQ8TGS1 66 aa0.55□□□□□ -2.32
CTK2YJL006C SDH6Q3E785 79 aa0.54□□□□□ -2.32
CTK2YJL006C YBR016WP38216 128 aa0.53□□□□□ -2.32
CTK2YJL006C CWP2P43497 92 aa0.53□□□□□ -2.32
CTK2YJL006C YOR105WQ08504 108 aa0.53□□□□□ -2.32
CTK2YJL006C NOP10Q6Q547 58 aaPredicted RBP0.53□□□□□ -2.32
CTK2YJL006C YCR085WP25650 117 aa0.52□□□□□ -2.33
CTK2YJL006C POC4Q12245 148 aaPredicted RBP0.52□□□□□ -2.33
CTK2YJL006C YKL065W-AQ2V2P2 73 aa0.52□□□□□ -2.33
CTK2YJL006C YOL097W-AQ3E7Y9 61 aa0.52□□□□□ -2.33
CTK2YJL006C YIL134C-AQ45U18 67 aa0.51□□□□□ -2.33
CTK2YJL006C YIL156W-BQ2V2P4 73 aa0.5□□□□□ -2.33
CTK2YJL006C SGF11Q03067 99 aa0.49□□□□□ -2.33
CTK2YJL006C YOR314WQ12506 109 aa0.49□□□□□ -2.33
CTK2YJL006C YPR108W-AQ3E7B3 70 aa0.49□□□□□ -2.33
CTK2YJL006C YPR145C-AQ2V2P0 78 aa0.48□□□□□ -2.33
CTK2YJL006C YDR381C-AQ3E6R5 114 aa0.48□□□□□ -2.33
CTK2YJL006C YBR032WP38223 100 aa0.47□□□□□ -2.33
CTK2YJL006C EDC1P53080 175 aaPredicted RBP0.47□□□□□ -2.33
CTK2YJL006C RPS27AP35997 82 aaKnown RBP0.46□□□□□ -2.34
CTK2YJL006C RPS27BP38711 82 aa0.46□□□□□ -2.34
CTK2YJL006C YFR010W-AP0C5N0 62 aa0.45□□□□□ -2.34
CTK2YJL006C QCR9P22289 66 aa0.43□□□□□ -2.34
CTK2YJL006C SWM2P40342 146 aa0.43□□□□□ -2.34
CTK2YJL006C YDL022C-AP0C5L6 82 aa0.42□□□□□ -2.34
CTK2YJL006C YGR025WP53216 100 aa0.42□□□□□ -2.34
CTK2YJL006C YGR121W-AQ3E816 71 aa0.41□□□□□ -2.34
CTK2YJL006C ATP17Q06405 101 aa0.38□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms