RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W YHR139C-AO13536 103 aa3.7□□□□□ -1.82
VMA16YHR026W FYV5P25585 152 aa3.7□□□□□ -1.82
VMA16YHR026W SNA2P56508 79 aa3.7□□□□□ -1.82
VMA16YHR026W ATP18P81450 59 aa3.7□□□□□ -1.82
VMA16YHR026W RSM19P53733 91 aaPredicted RBP3.69□□□□□ -1.82
VMA16YHR026W EMC6Q12431 108 aa3.69□□□□□ -1.82
VMA16YHR026W YLR307C-AQ3E825 87 aa3.69□□□□□ -1.82
VMA16YHR026W Q0032Q9ZZX7 96 aa3.69□□□□□ -1.82
VMA16YHR026W YFL067WP43537 175 aa3.68□□□□□ -1.82
VMA16YHR026W IGD1P43598 195 aa3.68□□□□□ -1.82
VMA16YHR026W YAR1P46683 200 aa3.68□□□□□ -1.82
VMA16YHR026W YBR230W-AQ3E762 66 aa3.68□□□□□ -1.82
VMA16YHR026W YNL042W-BQ3E7Z2 85 aa3.68□□□□□ -1.82
VMA16YHR026W YJL127C-BQ3E828 52 aa3.68□□□□□ -1.82
VMA16YHR026W ECM12O13529 151 aa3.67□□□□□ -1.82
VMA16YHR026W YHL042WP38729 150 aa3.67□□□□□ -1.82
VMA16YHR026W SHH4Q06236 168 aa3.67□□□□□ -1.82
VMA16YHR026W YDR029WQ12111 104 aa3.67□□□□□ -1.82
VMA16YHR026W RAD6P06104 172 aa3.66□□□□□ -1.82
VMA16YHR026W YFR009W-AP0C5M9 85 aa3.66□□□□□ -1.82
VMA16YHR026W SMP1P38128 452 aa3.66□□□□□ -1.82
VMA16YHR026W YER039C-AP0CD97 72 aa3.65□□□□□ -1.83
VMA16YHR026W SPT4P32914 102 aaPredicted RBP3.65□□□□□ -1.83
VMA16YHR026W BET1P22804 142 aa3.64□□□□□ -1.83
VMA16YHR026W YSY6P38374 65 aa3.64□□□□□ -1.83
VMA16YHR026W YGL193CP53097 103 aa3.64□□□□□ -1.83
VMA16YHR026W PEX22P39718 180 aa3.63□□□□□ -1.83
VMA16YHR026W YNL184CP53876 108 aa3.63□□□□□ -1.83
VMA16YHR026W COF1Q03048 143 aaKnown RBP3.63□□□□□ -1.83
VMA16YHR026W TDA2P40045 126 aa3.62□□□□□ -1.83
VMA16YHR026W YDR119W-AQ2V2P9 66 aa3.62□□□□□ -1.83
VMA16YHR026W YDR034C-AP0C289 58 aa3.61□□□□□ -1.83
VMA16YHR026W EDC2P40023 145 aaPredicted RBP3.61□□□□□ -1.83
VMA16YHR026W YGR039WP53225 103 aa3.61□□□□□ -1.83
VMA16YHR026W DDR2P89113 61 aa3.61□□□□□ -1.83
VMA16YHR026W YLR285C-AQ3E771 56 aa3.61□□□□□ -1.83
VMA16YHR026W RPL36BO14455 100 aaKnown RBP3.6□□□□□ -1.83
VMA16YHR026W YLR156WP0CE96 114 aa3.6□□□□□ -1.83
VMA16YHR026W YLR159WP0CE97 114 aa3.6□□□□□ -1.83
VMA16YHR026W YLR161WP0CE98 114 aa3.6□□□□□ -1.83
VMA16YHR026W ICS3P47034 131 aa3.6□□□□□ -1.83
VMA16YHR026W YPL038W-AQ3E7B4 63 aa3.6□□□□□ -1.83
VMA16YHR026W COX23P38824 151 aa3.59□□□□□ -1.83
VMA16YHR026W RPL38P49167 78 aaKnown RBP3.59□□□□□ -1.83
VMA16YHR026W EDC1P53080 175 aaPredicted RBP3.59□□□□□ -1.83
VMA16YHR026W YKL183C-AQ3E765 70 aa3.59□□□□□ -1.83
VMA16YHR026W YHR213W-BQ8TGK1 99 aa3.59□□□□□ -1.83
VMA16YHR026W RSM18P40033 138 aa3.58□□□□□ -1.84
VMA16YHR026W YOR072WQ08486 104 aa3.58□□□□□ -1.84
VMA16YHR026W ATP20Q12233 115 aa3.58□□□□□ -1.84
VMA16YHR026W TDA8Q6B2U8 126 aa3.58□□□□□ -1.84
VMA16YHR026W BSC4P53841 131 aa3.57□□□□□ -1.84
VMA16YHR026W YOR304C-AO14468 76 aa3.56□□□□□ -1.84
VMA16YHR026W YHL018WP38744 120 aaPredicted RBP3.56□□□□□ -1.84
VMA16YHR026W YHR007C-AQ07074 71 aa3.56□□□□□ -1.84
VMA16YHR026W YJL133C-AQ3E7A3 74 aa3.56□□□□□ -1.84
VMA16YHR026W YCR050CP25630 102 aa3.55□□□□□ -1.84
VMA16YHR026W TOM6P33448 61 aa3.55□□□□□ -1.84
VMA16YHR026W YGR121W-AQ3E816 71 aa3.55□□□□□ -1.84
VMA16YHR026W YER078W-AQ3E7A2 54 aa3.54□□□□□ -1.84
VMA16YHR026W ECM19Q06011 112 aa3.53□□□□□ -1.84
VMA16YHR026W YOL014WQ08110 124 aa3.53□□□□□ -1.84
VMA16YHR026W YEL045CP32616 141 aa3.52□□□□□ -1.85
VMA16YHR026W SPG1P50088 95 aa3.52□□□□□ -1.85
VMA16YHR026W YLR162WQ06235 118 aa3.52□□□□□ -1.85
VMA16YHR026W YOR314WQ12506 109 aa3.52□□□□□ -1.85
VMA16YHR026W LCL1Q02786 101 aa3.51□□□□□ -1.85
VMA16YHR026W YBL112CQ3E7Y4 105 aa3.51□□□□□ -1.85
VMA16YHR026W MIC10Q96VH5 97 aa3.51□□□□□ -1.85
VMA16YHR026W YER187WP40102 141 aa3.49□□□□□ -1.85
VMA16YHR026W YJR085CP47131 105 aaKnown RBP3.49□□□□□ -1.85
VMA16YHR026W YIR021W-AQ3E739 70 aa3.49□□□□□ -1.85
VMA16YHR026W YDR246W-AQ3E763 66 aa3.48□□□□□ -1.85
VMA16YHR026W AIM4P38305 123 aaPredicted RBP3.46□□□□□ -1.86
VMA16YHR026W MMS2P53152 137 aa3.46□□□□□ -1.86
VMA16YHR026W YPL080CQ02826 108 aa3.46□□□□□ -1.86
VMA16YHR026W YDR010CQ12426 110 aa3.46□□□□□ -1.86
VMA16YHR026W YDR182W-AQ3E796 67 aa3.46□□□□□ -1.86
VMA16YHR026W NOP10Q6Q547 58 aaPredicted RBP3.46□□□□□ -1.86
VMA16YHR026W YLR157W-DP0CE99 70 aa3.45□□□□□ -1.86
VMA16YHR026W YOL097W-AQ3E7Y9 61 aa3.45□□□□□ -1.86
VMA16YHR026W DDR48P18899 430 aaKnown RBP3.44□□□□□ -1.86
VMA16YHR026W YBR027CP38220 110 aa3.44□□□□□ -1.86
VMA16YHR026W YAR064WP39563 99 aa3.43□□□□□ -1.86
VMA16YHR026W HHF1P02309 103 aaKnown RBP3.42□□□□□ -1.86
VMA16YHR026W RPL36AP05745 100 aaPredicted RBP3.42□□□□□ -1.86
VMA16YHR026W YOR268CQ08734 132 aa3.42□□□□□ -1.86
VMA16YHR026W YOL166W-AQ8TGJ1 51 aa3.41□□□□□ -1.86
VMA16YHR026W YOL013W-AP0C272 63 aaPredicted RBP3.4□□□□□ -1.87
VMA16YHR026W LIP1Q03579 150 aa3.4□□□□□ -1.87
VMA16YHR026W YIL102CP40488 101 aa3.39□□□□□ -1.87
VMA16YHR026W YGL149WP53116 101 aa3.37□□□□□ -1.87
VMA16YHR026W YHL005CP38752 130 aa3.35□□□□□ -1.87
VMA16YHR026W YPR153WQ06537 140 aa3.35□□□□□ -1.87
VMA16YHR026W KSH1Q8TGJ3 72 aa3.34□□□□□ -1.87
VMA16YHR026W YHR073W-AP0C5N7 58 aa3.33□□□□□ -1.88
VMA16YHR026W YDL012CQ12489 107 aa3.33□□□□□ -1.88
VMA16YHR026W RPS30AP0CX33 63 aaKnown RBP3.31□□□□□ -1.88
VMA16YHR026W RPS30BP0CX34 63 aaKnown RBP3.31□□□□□ -1.88
VMA16YHR026W YHR125WP38831 101 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms