RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W YAL065CO13511 128 aa1.06□□□□□ -2.24
CBF2YGR140W YOR034C-AQ3E735 80 aa1.06□□□□□ -2.24
CBF2YGR140W APC1P53886 1748 aa1.06□□□□□ -2.24
CBF2YGR140W RPL37AP49166 88 aaKnown RBP1.05□□□□□ -2.24
CBF2YGR140W YOR105WQ08504 108 aa1.05□□□□□ -2.24
CBF2YGR140W YDR010CQ12426 110 aa1.05□□□□□ -2.24
CBF2YGR140W IQG1Q12280 1495 aa1.05□□□□□ -2.24
CBF2YGR140W PMD1P32634 1753 aa1.04□□□□□ -2.24
CBF2YGR140W ACC1Q00955 2233 aaKnown RBP1.04□□□□□ -2.24
CBF2YGR140W LSM2P38203 95 aaKnown RBP1.04□□□□□ -2.24
CBF2YGR140W YGR121W-AQ3E816 71 aa1.04□□□□□ -2.24
CBF2YGR140W FKS3Q04952 1785 aa1.04□□□□□ -2.24
CBF2YGR140W YPR145C-AQ2V2P0 78 aa1.04□□□□□ -2.24
CBF2YGR140W COX7P10174 60 aa1.03□□□□□ -2.24
CBF2YGR140W FPR2P32472 135 aa1.03□□□□□ -2.24
CBF2YGR140W PAU23Q07987 124 aa1.03□□□□□ -2.24
CBF2YGR140W PAU17Q12370 124 aa1.03□□□□□ -2.24
CBF2YGR140W YBT1P32386 1661 aa1.03□□□□□ -2.24
CBF2YGR140W RPL43AP0CX25 92 aaKnown RBP1.03□□□□□ -2.24
CBF2YGR140W RPL43BP0CX26 92 aa1.03□□□□□ -2.24
CBF2YGR140W QCR9P22289 66 aa1.03□□□□□ -2.24
CBF2YGR140W USO1P25386 1790 aa1.03□□□□□ -2.25
CBF2YGR140W YHR173CP38864 112 aa1.02□□□□□ -2.25
CBF2YGR140W NOP10Q6Q547 58 aaPredicted RBP1.02□□□□□ -2.25
CBF2YGR140W YOL097W-AQ3E7Y9 61 aa1.02□□□□□ -2.25
CBF2YGR140W YFL041W-AQ3E817 63 aa1.02□□□□□ -2.25
CBF2YGR140W SNQ2P32568 1501 aaKnown RBP1.02□□□□□ -2.25
CBF2YGR140W YMR122W-AQ3E842 84 aa1.02□□□□□ -2.25
CBF2YGR140W ATX1P38636 73 aa1.01□□□□□ -2.25
CBF2YGR140W VTH1P40438 1549 aa1.01□□□□□ -2.25
CBF2YGR140W VTH2P40890 1549 aa1.01□□□□□ -2.25
CBF2YGR140W Q0032Q9ZZX7 96 aa1.01□□□□□ -2.25
CBF2YGR140W RPL38P49167 78 aaKnown RBP1□□□□□ -2.25
CBF2YGR140W SPI1P40092 148 aa1□□□□□ -2.25
CBF2YGR140W YIL156W-BQ2V2P4 73 aa1□□□□□ -2.25
CBF2YGR140W YGR035W-AQ45U48 73 aa1□□□□□ -2.25
CBF2YGR140W RPL37BP51402 88 aaKnown RBP0.99□□□□□ -2.25
CBF2YGR140W ATP18P81450 59 aa0.99□□□□□ -2.25
CBF2YGR140W YBR201C-AQ2V2Q3 67 aa0.99□□□□□ -2.25
CBF2YGR140W LAA1P39526 2014 aa0.99□□□□□ -2.25
CBF2YGR140W PDR5P33302 1511 aaKnown RBP0.98□□□□□ -2.25
CBF2YGR140W SEC16P48415 2195 aaKnown RBP0.97□□□□□ -2.25
CBF2YGR140W GCN2P15442 1659 aa0.97□□□□□ -2.25
CBF2YGR140W YNL198CP40166 100 aa0.96□□□□□ -2.26
CBF2YGR140W ATP17Q06405 101 aa0.96□□□□□ -2.26
CBF2YGR140W SSS1P35179 80 aa0.96□□□□□ -2.26
CBF2YGR140W STT4P37297 1900 aa0.96□□□□□ -2.26
CBF2YGR140W YLR157W-EP0CF00 54 aa0.95□□□□□ -2.26
CBF2YGR140W PAU7P39545 55 aa0.95□□□□□ -2.26
CBF2YGR140W SGF11Q03067 99 aa0.95□□□□□ -2.26
CBF2YGR140W YLR307C-AQ3E825 87 aa0.95□□□□□ -2.26
CBF2YGR140W YDL022C-AP0C5L6 82 aa0.94□□□□□ -2.26
CBF2YGR140W SDH6Q3E785 79 aa0.94□□□□□ -2.26
CBF2YGR140W AUA1P32450 94 aa0.94□□□□□ -2.26
CBF2YGR140W TIM12P32830 109 aa0.94□□□□□ -2.26
CBF2YGR140W HKR1P41809 1802 aa0.94□□□□□ -2.26
CBF2YGR140W BRR2P32639 2163 aaKnown RBP0.94□□□□□ -2.26
CBF2YGR140W YBR032WP38223 100 aa0.94□□□□□ -2.26
CBF2YGR140W EDC1P53080 175 aaPredicted RBP0.94□□□□□ -2.26
CBF2YGR140W NUP192P47054 1683 aa0.93□□□□□ -2.26
CBF2YGR140W YFR010W-AP0C5N0 62 aa0.92□□□□□ -2.26
CBF2YGR140W RPC10P40422 70 aa0.92□□□□□ -2.26
CBF2YGR140W YNL190WP53872 204 aa0.92□□□□□ -2.26
CBF2YGR140W FIG2P25653 1609 aa0.92□□□□□ -2.26
CBF2YGR140W YOL131WQ08270 108 aa0.91□□□□□ -2.26
CBF2YGR140W YPR108W-AQ3E7B3 70 aa0.91□□□□□ -2.26
CBF2YGR140W YDR182W-AQ3E796 67 aa0.91□□□□□ -2.26
CBF2YGR140W YSY6P38374 65 aa0.9□□□□□ -2.26
CBF2YGR140W ERI1P62651 68 aaKnown RBP0.9□□□□□ -2.26
CBF2YGR140W YIL102C-AQ2V2P5 75 aa0.9□□□□□ -2.27
CBF2YGR140W YDR246W-AQ3E763 66 aa0.9□□□□□ -2.27
CBF2YGR140W VMA9Q3E7B6 73 aa0.9□□□□□ -2.27
CBF2YGR140W HUB1Q6Q546 73 aa0.9□□□□□ -2.27
CBF2YGR140W HFA1P32874 2273 aa0.88□□□□□ -2.27
CBF2YGR140W YOR032W-AQ8TGS1 66 aa0.87□□□□□ -2.27
CBF2YGR140W YJR107C-AP0CT86 78 aa0.86□□□□□ -2.27
CBF2YGR140W YOL164W-AQ3E7A5 60 aa0.86□□□□□ -2.27
CBF2YGR140W BEM2P39960 2167 aaKnown RBP0.86□□□□□ -2.27
CBF2YGR140W YKL018C-AQ3E7A7 99 aa0.85□□□□□ -2.27
CBF2YGR140W POL2P21951 2222 aaKnown RBP0.85□□□□□ -2.27
CBF2YGR140W RPS29BP41058 56 aaKnown RBP0.84□□□□□ -2.27
CBF2YGR140W YGR025WP53216 100 aa0.84□□□□□ -2.27
CBF2YGR140W YOR011W-AQ3E807 68 aa0.84□□□□□ -2.27
CBF2YGR140W YKL023C-AQ2V2P3 75 aa0.84□□□□□ -2.28
CBF2YGR140W YBR016WP38216 128 aa0.83□□□□□ -2.28
CBF2YGR140W YLR146W-AQ2V2P1 62 aa0.82□□□□□ -2.28
CBF2YGR140W RPS30AP0CX33 63 aaKnown RBP0.81□□□□□ -2.28
CBF2YGR140W RPS30BP0CX34 63 aaKnown RBP0.81□□□□□ -2.28
CBF2YGR140W YBR200W-AQ3E755 54 aa0.81□□□□□ -2.28
CBF2YGR140W YBL039W-BP0C268 59 aa0.81□□□□□ -2.28
CBF2YGR140W OLI1P61829 76 aa0.81□□□□□ -2.28
CBF2YGR140W YIL134C-AQ45U18 67 aa0.8□□□□□ -2.28
CBF2YGR140W YOR394C-AQ8TGJ0 55 aa0.79□□□□□ -2.28
CBF2YGR140W YFR009W-AP0C5M9 85 aa0.79□□□□□ -2.28
CBF2YGR140W YOL166W-AQ8TGJ1 51 aa0.79□□□□□ -2.28
CBF2YGR140W RPS27AP35997 82 aaKnown RBP0.77□□□□□ -2.29
CBF2YGR140W YBL044WP38194 122 aa0.77□□□□□ -2.29
CBF2YGR140W BLM10P43583 2143 aa0.75□□□□□ -2.29
CBF2YGR140W YMR001C-AQ8TGS9 76 aa0.75□□□□□ -2.29
CBF2YGR140W FLO1P32768 1537 aa0.74□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms