RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W YPL278CQ08990 100 aa2.69□□□□□ -1.98
SPT6YGR116W SPT4P32914 102 aaPredicted RBP2.68□□□□□ -1.98
SPT6YGR116W RPC10P40422 70 aa2.68□□□□□ -1.98
SPT6YGR116W YJL127C-BQ3E828 52 aa2.68□□□□□ -1.98
SPT6YGR116W TAR1Q8TGM6 124 aa2.68□□□□□ -1.98
SPT6YGR116W RPS30AP0CX33 63 aaKnown RBP2.67□□□□□ -1.98
SPT6YGR116W RPS30BP0CX34 63 aaKnown RBP2.67□□□□□ -1.98
SPT6YGR116W YBR144CP34215 104 aa2.67□□□□□ -1.98
SPT6YGR116W YBR230W-AQ3E762 66 aa2.67□□□□□ -1.98
SPT6YGR116W YHR213W-BQ8TGK1 99 aa2.67□□□□□ -1.98
SPT6YGR116W YBR182C-AQ8TGU6 64 aa2.67□□□□□ -1.98
SPT6YGR116W OST5Q92316 86 aa2.67□□□□□ -1.98
SPT6YGR116W YAR023CD6VPM8 179 aa2.66□□□□□ -1.98
SPT6YGR116W HOT13P36078 116 aa2.66□□□□□ -1.98
SPT6YGR116W PEX22P39718 180 aa2.66□□□□□ -1.98
SPT6YGR116W YJL133C-AQ3E7A3 74 aa2.66□□□□□ -1.98
SPT6YGR116W YGR121W-AQ3E816 71 aa2.66□□□□□ -1.98
SPT6YGR116W YOL166W-AQ8TGJ1 51 aa2.66□□□□□ -1.98
SPT6YGR116W MIC10Q96VH5 97 aa2.66□□□□□ -1.98
SPT6YGR116W LIP1Q03579 150 aa2.66□□□□□ -1.98
SPT6YGR116W YNL162W-AQ3E7A8 72 aa2.66□□□□□ -1.98
SPT6YGR116W SAP30P38429 201 aa2.66□□□□□ -1.98
SPT6YGR116W HUB1Q6Q546 73 aa2.66□□□□□ -1.98
SPT6YGR116W MMS2P53152 137 aa2.65□□□□□ -1.98
SPT6YGR116W YOR268CQ08734 132 aa2.65□□□□□ -1.98
SPT6YGR116W YAL064WP39711 94 aa2.65□□□□□ -1.99
SPT6YGR116W YDR274CP87283 123 aa2.65□□□□□ -1.99
SPT6YGR116W RDS3Q06835 107 aaPredicted RBP2.65□□□□□ -1.99
SPT6YGR116W YNL042W-BQ3E7Z2 85 aa2.65□□□□□ -1.99
SPT6YGR116W RRT15Q3E811 62 aa2.65□□□□□ -1.99
SPT6YGR116W YCR001WP25347 104 aa2.64□□□□□ -1.99
SPT6YGR116W YMR122CQ03879 124 aa2.64□□□□□ -1.99
SPT6YGR116W Q0032Q9ZZX7 96 aa2.64□□□□□ -1.99
SPT6YGR116W YOL014WQ08110 124 aa2.64□□□□□ -1.99
SPT6YGR116W YGR035W-AQ45U48 73 aa2.63□□□□□ -1.99
SPT6YGR116W YCR041WP37265 110 aa2.63□□□□□ -1.99
SPT6YGR116W SDH6Q3E785 79 aa2.63□□□□□ -1.99
SPT6YGR116W YER188C-AP0C0V2 99 aa2.63□□□□□ -1.99
SPT6YGR116W MLF3P32047 452 aa2.63□□□□□ -1.99
SPT6YGR116W SGF11Q03067 99 aa2.63□□□□□ -1.99
SPT6YGR116W ECM19Q06011 112 aa2.62□□□□□ -1.99
SPT6YGR116W YGL041C-BQ3E750 60 aa2.62□□□□□ -1.99
SPT6YGR116W YLR307C-AQ3E825 87 aa2.62□□□□□ -1.99
SPT6YGR116W RPL33AP05744 107 aaKnown RBP2.61□□□□□ -1.99
SPT6YGR116W YHR212W-AP0CX91 67 aa2.61□□□□□ -1.99
SPT6YGR116W RPL33BP41056 107 aaKnown RBP2.61□□□□□ -1.99
SPT6YGR116W YPR153WQ06537 140 aa2.61□□□□□ -1.99
SPT6YGR116W HHF1P02309 103 aaKnown RBP2.61□□□□□ -1.99
SPT6YGR116W YOL013W-AP0C272 63 aaPredicted RBP2.61□□□□□ -1.99
SPT6YGR116W RPB9P27999 122 aa2.6□□□□□ -1.99
SPT6YGR116W DDR2P89113 61 aa2.6□□□□□ -1.99
SPT6YGR116W YER145C-AA0A023PYF4 145 aa2.6□□□□□ -1.99
SPT6YGR116W YLR157W-DP0CE99 70 aa2.6□□□□□ -1.99
SPT6YGR116W YCR095W-AQ3E787 52 aa2.6□□□□□ -1.99
SPT6YGR116W IGD1P43598 195 aa2.6□□□□□ -1.99
SPT6YGR116W YOR072WQ08486 104 aa2.6□□□□□ -1.99
SPT6YGR116W Q0297Q9ZZV8 51 aa2.6□□□□□ -1.99
SPT6YGR116W SNA2P56508 79 aa2.59□□□□□ -2
SPT6YGR116W YBL081WP38180 368 aaKnown RBP2.58□□□□□ -2
SPT6YGR116W RTC6O14464 93 aa2.58□□□□□ -2
SPT6YGR116W YAR064WP39563 99 aa2.58□□□□□ -2
SPT6YGR116W SPG1P50088 95 aa2.58□□□□□ -2
SPT6YGR116W YMR001C-AQ8TGS9 76 aa2.58□□□□□ -2
SPT6YGR116W DIF1O13577 133 aa2.58□□□□□ -2
SPT6YGR116W YEL045CP32616 141 aa2.58□□□□□ -2
SPT6YGR116W YHR007C-AQ07074 71 aa2.58□□□□□ -2
SPT6YGR116W BSC4P53841 131 aa2.57□□□□□ -2
SPT6YGR116W YHR125WP38831 101 aa2.56□□□□□ -2
SPT6YGR116W YML100W-AQ8TGT0 57 aa2.56□□□□□ -2
SPT6YGR116W URA2P07259 2214 aaKnown RBP2.56□□□□□ -2
SPT6YGR116W YDR115WQ04598 105 aa2.55□□□□□ -2
SPT6YGR116W FMP27Q06179 2628 aa2.55□□□□□ -2
SPT6YGR116W YOR376W-AQ3E805 51 aa2.54□□□□□ -2
SPT6YGR116W YDR010CQ12426 110 aa2.54□□□□□ -2
SPT6YGR116W YGL193CP53097 103 aa2.53□□□□□ -2
SPT6YGR116W ATP17Q06405 101 aa2.53□□□□□ -2
SPT6YGR116W YCR043CP25361 127 aa2.53□□□□□ -2
SPT6YGR116W AUA1P32450 94 aa2.53□□□□□ -2
SPT6YGR116W YBR027CP38220 110 aa2.53□□□□□ -2
SPT6YGR116W YFR032C-BQ8TGU2 87 aa2.52□□□□□ -2.01
SPT6YGR116W YPR117WQ06116 2489 aa2.52□□□□□ -2.01
SPT6YGR116W YOL097W-AQ3E7Y9 61 aa2.5□□□□□ -2.01
SPT6YGR116W TOM1Q03280 3268 aa2.5□□□□□ -2.01
SPT6YGR116W YLL066W-BQ8TGJ7 56 aa2.5□□□□□ -2.01
SPT6YGR116W YGL149WP53116 101 aa2.49□□□□□ -2.01
SPT6YGR116W YGL034CP53186 121 aa2.49□□□□□ -2.01
SPT6YGR116W GIS2P53849 153 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SPT6YGR116W YIL156W-BQ2V2P4 73 aa2.48□□□□□ -2.01
SPT6YGR116W YJL197C-AP0C5P0 93 aa2.48□□□□□ -2.01
SPT6YGR116W VPS13Q07878 3144 aa2.48□□□□□ -2.01
SPT6YGR116W YNL122CP53921 115 aaPredicted RBP2.47□□□□□ -2.01
SPT6YGR116W YBR201C-AQ2V2Q3 67 aa2.47□□□□□ -2.01
SPT6YGR116W MRX7P53869 86 aa2.46□□□□□ -2.02
SPT6YGR116W DDR48P18899 430 aaKnown RBP2.46□□□□□ -2.02
SPT6YGR116W YDL012CQ12489 107 aa2.45□□□□□ -2.02
SPT6YGR116W YMR230W-AQ3E7B5 62 aa2.44□□□□□ -2.02
SPT6YGR116W LCL2Q08045 131 aa2.44□□□□□ -2.02
SPT6YGR116W COX8P04039 78 aa2.43□□□□□ -2.02
SPT6YGR116W YGR146C-AQ8TGT9 53 aa2.43□□□□□ -2.02
SPT6YGR116W QCR10P37299 77 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 67.6 ms