RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W RPL26AP05743 127 aaKnown RBP4.63□□□□□ -1.67
RGD2YFL047W YLR156WP0CE96 114 aa4.63□□□□□ -1.67
RGD2YFL047W YLR159WP0CE97 114 aa4.63□□□□□ -1.67
RGD2YFL047W YLR161WP0CE98 114 aa4.63□□□□□ -1.67
RGD2YFL047W FYV5P25585 152 aa4.63□□□□□ -1.67
RGD2YFL047W RPL26BP53221 127 aaKnown RBP4.63□□□□□ -1.67
RGD2YFL047W AUA1P32450 94 aa4.63□□□□□ -1.67
RGD2YFL047W YKL069WP36088 180 aa4.63□□□□□ -1.67
RGD2YFL047W TSC3Q3E790 80 aa4.63□□□□□ -1.67
RGD2YFL047W RSM19P53733 91 aaPredicted RBP4.62□□□□□ -1.67
RGD2YFL047W YJL127C-BQ3E828 52 aa4.62□□□□□ -1.67
RGD2YFL047W RPL38P49167 78 aaKnown RBP4.61□□□□□ -1.67
RGD2YFL047W YIR021W-AQ3E739 70 aa4.6□□□□□ -1.67
RGD2YFL047W YAR023CD6VPM8 179 aa4.59□□□□□ -1.67
RGD2YFL047W TOM6P33448 61 aa4.59□□□□□ -1.67
RGD2YFL047W ICS3P47034 131 aa4.59□□□□□ -1.67
RGD2YFL047W YLR122CQ12312 125 aa4.59□□□□□ -1.67
RGD2YFL047W YDR246W-AQ3E763 66 aa4.59□□□□□ -1.67
RGD2YFL047W RSM18P40033 138 aa4.58□□□□□ -1.68
RGD2YFL047W YNL042W-BQ3E7Z2 85 aa4.58□□□□□ -1.68
RGD2YFL047W Q0032Q9ZZX7 96 aa4.58□□□□□ -1.68
RGD2YFL047W BET1P22804 142 aa4.58□□□□□ -1.68
RGD2YFL047W SNA2P56508 79 aa4.58□□□□□ -1.68
RGD2YFL047W TDA2P40045 126 aa4.57□□□□□ -1.68
RGD2YFL047W SFT1P43682 97 aa4.57□□□□□ -1.68
RGD2YFL047W YOL014WQ08110 124 aa4.57□□□□□ -1.68
RGD2YFL047W ECM12O13529 151 aa4.56□□□□□ -1.68
RGD2YFL047W YLR415CO13578 112 aa4.56□□□□□ -1.68
RGD2YFL047W YER187WP40102 141 aa4.56□□□□□ -1.68
RGD2YFL047W ATP20Q12233 115 aa4.55□□□□□ -1.68
RGD2YFL047W YRA2P36036 203 aaKnown RBP RIP-Chip data4.55□□□□□ -1.68not detected
RGD2YFL047W COX23P38824 151 aa4.54□□□□□ -1.68
RGD2YFL047W YHR213W-BQ8TGK1 99 aa4.54□□□□□ -1.68
RGD2YFL047W EDC2P40023 145 aaPredicted RBP4.53□□□□□ -1.68
RGD2YFL047W DYN1P36022 4092 aa4.53□□□□□ -1.68
RGD2YFL047W PEX22P39718 180 aa4.52□□□□□ -1.69
RGD2YFL047W GIS2P53849 153 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
RGD2YFL047W RPL11AP0C0W9 174 aaKnown RBP4.52□□□□□ -1.69
RGD2YFL047W YKL183C-AQ3E765 70 aa4.52□□□□□ -1.69
RGD2YFL047W SPT4P32914 102 aaPredicted RBP4.51□□□□□ -1.69
RGD2YFL047W YGL193CP53097 103 aa4.51□□□□□ -1.69
RGD2YFL047W YGL041C-BQ3E750 60 aa4.51□□□□□ -1.69
RGD2YFL047W YJL133C-AQ3E7A3 74 aa4.51□□□□□ -1.69
RGD2YFL047W NOP10Q6Q547 58 aaPredicted RBP4.51□□□□□ -1.69
RGD2YFL047W RPL36BO14455 100 aaKnown RBP4.5□□□□□ -1.69
RGD2YFL047W AIM4P38305 123 aaPredicted RBP4.5□□□□□ -1.69
RGD2YFL047W BSC4P53841 131 aa4.5□□□□□ -1.69
RGD2YFL047W YHR007C-AQ07074 71 aa4.5□□□□□ -1.69
RGD2YFL047W RPL11BQ3E757 174 aaPredicted RBP4.5□□□□□ -1.69
RGD2YFL047W DDR2P89113 61 aa4.49□□□□□ -1.69
RGD2YFL047W TDA8Q6B2U8 126 aa4.49□□□□□ -1.69
RGD2YFL047W YLR361C-AQ3E795 98 aa4.48□□□□□ -1.69
RGD2YFL047W YCR050CP25630 102 aa4.48□□□□□ -1.69
RGD2YFL047W ECM19Q06011 112 aa4.48□□□□□ -1.69
RGD2YFL047W YOR314WQ12506 109 aa4.48□□□□□ -1.69
RGD2YFL047W YOR072WQ08486 104 aa4.47□□□□□ -1.69
RGD2YFL047W YEL045CP32616 141 aa4.46□□□□□ -1.69
RGD2YFL047W YPR195CQ06594 109 aa4.46□□□□□ -1.7
RGD2YFL047W YER039C-AP0CD97 72 aa4.45□□□□□ -1.7
RGD2YFL047W YLR162WQ06235 118 aa4.45□□□□□ -1.7
RGD2YFL047W YOL166W-AQ8TGJ1 51 aa4.45□□□□□ -1.7
RGD2YFL047W MIC10Q96VH5 97 aa4.45□□□□□ -1.7
RGD2YFL047W MRP10O75012 95 aa4.44□□□□□ -1.7
RGD2YFL047W YMR230W-AQ3E7B5 62 aa4.43□□□□□ -1.7
RGD2YFL047W YDR034C-AP0C289 58 aa4.42□□□□□ -1.7
RGD2YFL047W YJL197C-AP0C5P0 93 aa4.41□□□□□ -1.7
RGD2YFL047W YDR182W-AQ3E796 67 aa4.41□□□□□ -1.7
RGD2YFL047W RPL36AP05745 100 aaPredicted RBP4.4□□□□□ -1.71
RGD2YFL047W HOT13P36078 116 aa4.38□□□□□ -1.71
RGD2YFL047W LIP1Q03579 150 aa4.38□□□□□ -1.71
RGD2YFL047W YGR121W-AQ3E816 71 aa4.37□□□□□ -1.71
RGD2YFL047W YOL013W-AP0C272 63 aaPredicted RBP4.36□□□□□ -1.71
RGD2YFL047W YIL102CP40488 101 aa4.36□□□□□ -1.71
RGD2YFL047W YHL005CP38752 130 aa4.35□□□□□ -1.71
RGD2YFL047W YBR027CP38220 110 aa4.34□□□□□ -1.71
RGD2YFL047W YAR064WP39563 99 aa4.34□□□□□ -1.71
RGD2YFL047W SBH1P52870 82 aa4.34□□□□□ -1.71
RGD2YFL047W YBR182C-AQ8TGU6 64 aa4.34□□□□□ -1.71
RGD2YFL047W RPS30AP0CX33 63 aaKnown RBP4.33□□□□□ -1.72
RGD2YFL047W RPS30BP0CX34 63 aaKnown RBP4.33□□□□□ -1.72
RGD2YFL047W YCR043CP25361 127 aa4.32□□□□□ -1.72
RGD2YFL047W SPG1P50088 95 aa4.31□□□□□ -1.72
RGD2YFL047W LCL2Q08045 131 aa4.29□□□□□ -1.72
RGD2YFL047W KSH1Q8TGJ3 72 aa4.29□□□□□ -1.72
RGD2YFL047W YJR085CP47131 105 aaKnown RBP4.28□□□□□ -1.72
RGD2YFL047W YOL097W-AQ3E7Y9 61 aa4.27□□□□□ -1.73
RGD2YFL047W MDN1Q12019 4910 aaKnown RBP4.27□□□□□ -1.73
RGD2YFL047W YDL012CQ12489 107 aa4.26□□□□□ -1.73
RGD2YFL047W YLR157W-DP0CE99 70 aa4.25□□□□□ -1.73
RGD2YFL047W YPR153WQ06537 140 aa4.25□□□□□ -1.73
RGD2YFL047W YHR125WP38831 101 aa4.24□□□□□ -1.73
RGD2YFL047W LCL1Q02786 101 aa4.24□□□□□ -1.73
RGD2YFL047W YOR268CQ08734 132 aa4.24□□□□□ -1.73
RGD2YFL047W KTI11Q3E840 82 aa4.23□□□□□ -1.73
RGD2YFL047W YOR381W-AQ3E804 55 aa4.22□□□□□ -1.73
RGD2YFL047W YGR164WP53291 111 aa4.21□□□□□ -1.74
RGD2YFL047W YDR010CQ12426 110 aa4.2□□□□□ -1.74
RGD2YFL047W MMS2P53152 137 aa4.19□□□□□ -1.74
RGD2YFL047W YMR122CQ03879 124 aa4.19□□□□□ -1.74
RGD2YFL047W SDH6Q3E785 79 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms