RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W PAU5P43575 122 aa0.41□□□□□ -2.34
SHE9YDR393W SHH4Q06236 168 aa0.41□□□□□ -2.34
SHE9YDR393W HPA2Q06592 156 aa0.41□□□□□ -2.34
SHE9YDR393W YOR072WQ08486 104 aa0.41□□□□□ -2.34
SHE9YDR393W YOR381W-AQ3E804 55 aa0.41□□□□□ -2.34
SHE9YDR393W YJL127C-BQ3E828 52 aa0.41□□□□□ -2.34
SHE9YDR393W YNR034W-AQ3E841 98 aa0.41□□□□□ -2.34
SHE9YDR393W RPL29P05747 59 aaPredicted RBP0.4□□□□□ -2.35
SHE9YDR393W YDL022C-AP0C5L6 82 aa0.4□□□□□ -2.35
SHE9YDR393W GCV3P39726 170 aaPredicted RBP0.4□□□□□ -2.35
SHE9YDR393W RSM18P40033 138 aa0.4□□□□□ -2.35
SHE9YDR393W YNL190WP53872 204 aa0.4□□□□□ -2.35
SHE9YDR393W RPL36BO14455 100 aaKnown RBP0.39□□□□□ -2.35
SHE9YDR393W YHR073W-AP0C5N7 58 aa0.39□□□□□ -2.35
SHE9YDR393W YKR041WP36134 250 aa0.39□□□□□ -2.35
SHE9YDR393W SHG1P38337 142 aa0.39□□□□□ -2.35
SHE9YDR393W YGL230CP53074 147 aa0.39□□□□□ -2.35
SHE9YDR393W JAC1P53193 184 aa0.39□□□□□ -2.35
SHE9YDR393W MRPS12P53732 153 aa0.39□□□□□ -2.35
SHE9YDR393W AIM11P87275 137 aa0.39□□□□□ -2.35
SHE9YDR393W MGR2Q02889 113 aa0.39□□□□□ -2.35
SHE9YDR393W COX19Q3E731 98 aa0.39□□□□□ -2.35
SHE9YDR393W YLR361C-AQ3E795 98 aa0.39□□□□□ -2.35
SHE9YDR393W YLR157W-DP0CE99 70 aa0.38□□□□□ -2.35
SHE9YDR393W HMRA1P0CY11 126 aa0.38□□□□□ -2.35
SHE9YDR393W FYV5P25585 152 aa0.38□□□□□ -2.35
SHE9YDR393W GSP1P32835 219 aaKnown RBP0.38□□□□□ -2.35
SHE9YDR393W YBR016WP38216 128 aa0.38□□□□□ -2.35
SHE9YDR393W EDC1P53080 175 aaPredicted RBP0.38□□□□□ -2.35
SHE9YDR393W COF1Q03048 143 aaKnown RBP0.38□□□□□ -2.35
SHE9YDR393W IRC21Q04772 201 aa0.38□□□□□ -2.35
SHE9YDR393W YDL157CQ12082 118 aa0.38□□□□□ -2.35
SHE9YDR393W YOR034C-AQ3E735 80 aa0.38□□□□□ -2.35
SHE9YDR393W RAD6P06104 172 aa0.37□□□□□ -2.35
SHE9YDR393W FUN14P18411 198 aa0.37□□□□□ -2.35
SHE9YDR393W YER187WP40102 141 aa0.37□□□□□ -2.35
SHE9YDR393W ICY1Q04329 127 aa0.37□□□□□ -2.35
SHE9YDR393W YPL261CQ08976 102 aa0.37□□□□□ -2.35
SHE9YDR393W FYV7Q12247 151 aa0.37□□□□□ -2.35
SHE9YDR393W YOL097W-AQ3E7Y9 61 aa0.37□□□□□ -2.35
SHE9YDR393W ATP5P09457 212 aa0.36□□□□□ -2.35
SHE9YDR393W YOL013W-AP0C272 63 aaPredicted RBP0.36□□□□□ -2.35
SHE9YDR393W FYV4P38783 130 aaPredicted RBP0.36□□□□□ -2.35
SHE9YDR393W PHS1P40857 217 aa0.36□□□□□ -2.35
SHE9YDR393W ERV14P53173 138 aa0.36□□□□□ -2.35
SHE9YDR393W YMR103CQ04436 120 aa0.36□□□□□ -2.35
SHE9YDR393W PAU17Q12370 124 aa0.36□□□□□ -2.35
SHE9YDR393W YHR213W-BQ8TGK1 99 aa0.36□□□□□ -2.35
SHE9YDR393W HSP10P38910 106 aa0.35□□□□□ -2.35
SHE9YDR393W SNN1P48232 102 aa0.35□□□□□ -2.35
SHE9YDR393W YPR153WQ06537 140 aa0.34□□□□□ -2.35
SHE9YDR393W YLR050CQ12155 161 aaKnown RBP0.34□□□□□ -2.35
SHE9YDR393W RPS22BQ3E7Y3 130 aaKnown RBP0.34□□□□□ -2.35
SHE9YDR393W MIC10Q96VH5 97 aa0.34□□□□□ -2.35
SHE9YDR393W NHP6AP11632 93 aaKnown RBP0.33□□□□□ -2.36
SHE9YDR393W YBL044WP38194 122 aa0.33□□□□□ -2.36
SHE9YDR393W APS2Q00381 147 aa0.33□□□□□ -2.36
SHE9YDR393W PAU23Q07987 124 aa0.33□□□□□ -2.36
SHE9YDR393W HHY1P39982 102 aa0.32□□□□□ -2.36
SHE9YDR393W YGR164WP53291 111 aa0.32□□□□□ -2.36
SHE9YDR393W HHO1P53551 258 aa0.32□□□□□ -2.36
SHE9YDR393W VMA9Q3E7B6 73 aa0.32□□□□□ -2.36
SHE9YDR393W YOR316C-AQ3E806 69 aa0.32□□□□□ -2.36
SHE9YDR393W YML054C-AQ3E809 52 aa0.32□□□□□ -2.36
SHE9YDR393W SCS22Q6Q595 175 aa0.32□□□□□ -2.36
SHE9YDR393W RSM19P53733 91 aaPredicted RBP0.32□□□□□ -2.36
SHE9YDR393W YJL133C-AQ3E7A3 74 aa0.32□□□□□ -2.36
SHE9YDR393W VMA21P41806 77 aa0.31□□□□□ -2.36
SHE9YDR393W SFT1P43682 97 aa0.31□□□□□ -2.36
SHE9YDR393W YLR255CO13574 117 aa0.3□□□□□ -2.36
SHE9YDR393W RPS30AP0CX33 63 aaKnown RBP0.3□□□□□ -2.36
SHE9YDR393W RPS30BP0CX34 63 aaKnown RBP0.3□□□□□ -2.36
SHE9YDR393W LIP1Q03579 150 aa0.3□□□□□ -2.36
SHE9YDR393W ATP14Q12349 124 aa0.3□□□□□ -2.36
SHE9YDR393W YHR130CP38834 111 aa0.29□□□□□ -2.36
SHE9YDR393W ICS3P47034 131 aa0.29□□□□□ -2.36
SHE9YDR393W RPL36AP05745 100 aaPredicted RBP0.28□□□□□ -2.36
SHE9YDR393W YFR009W-AP0C5M9 85 aa0.28□□□□□ -2.36
SHE9YDR393W ATG8P38182 117 aaRIP-Chip data0.28□□□□□ -2.36not detected
SHE9YDR393W ARL3Q02804 198 aa0.28□□□□□ -2.36
SHE9YDR393W MRPL44P19956 98 aa0.27□□□□□ -2.37
SHE9YDR393W SRB6P32570 121 aa0.27□□□□□ -2.37
SHE9YDR393W YEL014CP39999 101 aa0.27□□□□□ -2.37
SHE9YDR393W HUR1P45820 110 aa0.27□□□□□ -2.37
SHE9YDR393W YJR107C-AP0CT86 78 aa0.26□□□□□ -2.37
SHE9YDR393W INO4P13902 151 aa0.26□□□□□ -2.37
SHE9YDR393W NHP2P32495 156 aaPredicted RBP0.26□□□□□ -2.37
SHE9YDR393W GLC8P41818 229 aa0.26□□□□□ -2.37
SHE9YDR393W YLR296WQ05898 108 aa0.26□□□□□ -2.37
SHE9YDR393W YIL156W-BQ2V2P4 73 aa0.26□□□□□ -2.37
SHE9YDR393W YKL044WP36092 106 aa0.25□□□□□ -2.37
SHE9YDR393W ATP18P81450 59 aa0.25□□□□□ -2.37
SHE9YDR393W AIM4P38305 123 aaPredicted RBP0.24□□□□□ -2.37
SHE9YDR393W COX23P38824 151 aa0.24□□□□□ -2.37
SHE9YDR393W MSL1P40567 111 aaPredicted RBP0.24□□□□□ -2.37
SHE9YDR393W GTT1P40582 234 aa0.24□□□□□ -2.37
SHE9YDR393W RPL38P49167 78 aaKnown RBP0.24□□□□□ -2.37
SHE9YDR393W COA6Q3E846 104 aa0.24□□□□□ -2.37
SHE9YDR393W YOR304C-AO14468 76 aa0.23□□□□□ -2.37
SHE9YDR393W POP7P38291 140 aa0.23□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms