RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	YCR085W	P25650	117 aa		3.22	□□□□□ -1.89
SUP35	YDR172W	SKI6	P46948	246 aa	Predicted RBP	3.22	□□□□□ -1.89
SUP35	YDR172W	YDR119W-A	Q2V2P9	66 aa		3.22	□□□□□ -1.89
SUP35	YDR172W	YJR107C-A	P0CT86	78 aa		3.21	□□□□□ -1.89
SUP35	YDR172W	SMP1	P38128	452 aa		3.21	□□□□□ -1.89
SUP35	YDR172W	SNA2	P56508	79 aa		3.21	□□□□□ -1.9
SUP35	YDR172W	UBC4	P15731	148 aa		3.2	□□□□□ -1.9
SUP35	YDR172W	YHR139C-A	O13536	103 aa		3.19	□□□□□ -1.9
SUP35	YDR172W	EDC1	P53080	175 aa	Predicted RBP	3.19	□□□□□ -1.9
SUP35	YDR172W	YPR195C	Q06594	109 aa		3.19	□□□□□ -1.9
SUP35	YDR172W	YCR050C	P25630	102 aa		3.18	□□□□□ -1.9
SUP35	YDR172W	COF1	Q03048	143 aa	Known RBP	3.18	□□□□□ -1.9
SUP35	YDR172W	YFL041W-A	Q3E817	63 aa		3.18	□□□□□ -1.9
SUP35	YDR172W	Q0032	Q9ZZX7	96 aa		3.18	□□□□□ -1.9
SUP35	YDR172W	SFT1	P43682	97 aa		3.18	□□□□□ -1.9
SUP35	YDR172W	ATP18	P81450	59 aa		3.18	□□□□□ -1.9
SUP35	YDR172W	YBR230W-A	Q3E762	66 aa		3.18	□□□□□ -1.9
SUP35	YDR172W	YLR307C-A	Q3E825	87 aa		3.18	□□□□□ -1.9
SUP35	YDR172W	YJL127C-B	Q3E828	52 aa		3.17	□□□□□ -1.9
SUP35	YDR172W	KTI11	Q3E840	82 aa		3.17	□□□□□ -1.9
SUP35	YDR172W	RPL26A	P05743	127 aa	Known RBP	3.16	□□□□□ -1.9
SUP35	YDR172W	YFR009W-A	P0C5M9	85 aa		3.16	□□□□□ -1.9
SUP35	YDR172W	FYV5	P25585	152 aa		3.16	□□□□□ -1.9
SUP35	YDR172W	PEX22	P39718	180 aa		3.16	□□□□□ -1.9
SUP35	YDR172W	RPL26B	P53221	127 aa	Known RBP	3.16	□□□□□ -1.9
SUP35	YDR172W	GAT4	P40569	121 aa		3.16	□□□□□ -1.9
SUP35	YDR172W	YLR156W	P0CE96	114 aa		3.15	□□□□□ -1.9
SUP35	YDR172W	YLR159W	P0CE97	114 aa		3.15	□□□□□ -1.9
SUP35	YDR172W	YLR161W	P0CE98	114 aa		3.15	□□□□□ -1.9
SUP35	YDR172W	MMS2	P53152	137 aa		3.15	□□□□□ -1.9
SUP35	YDR172W	YGL041C-B	Q3E750	60 aa		3.15	□□□□□ -1.9
SUP35	YDR172W	YDR034C-A	P0C289	58 aa		3.15	□□□□□ -1.91
SUP35	YDR172W	KSH1	Q8TGJ3	72 aa		3.15	□□□□□ -1.91
SUP35	YDR172W	MDN1	Q12019	4910 aa	Known RBP	3.14	□□□□□ -1.91
SUP35	YDR172W	YLR412C-A	Q3E742	68 aa		3.14	□□□□□ -1.91
SUP35	YDR172W	YNL042W-B	Q3E7Z2	85 aa		3.14	□□□□□ -1.91
SUP35	YDR172W	BET1	P22804	142 aa		3.13	□□□□□ -1.91
SUP35	YDR172W	EMC6	Q12431	108 aa		3.13	□□□□□ -1.91
SUP35	YDR172W	TSC3	Q3E790	80 aa		3.13	□□□□□ -1.91
SUP35	YDR172W	TOM6	P33448	61 aa		3.13	□□□□□ -1.91
SUP35	YDR172W	YHL042W	P38729	150 aa		3.13	□□□□□ -1.91
SUP35	YDR172W	RPL38	P49167	78 aa	Known RBP	3.13	□□□□□ -1.91
SUP35	YDR172W	YNL277W-A	Q3E7Z0	62 aa		3.13	□□□□□ -1.91
SUP35	YDR172W	YHL018W	P38744	120 aa	Predicted RBP	3.12	□□□□□ -1.91
SUP35	YDR172W	YGL193C	P53097	103 aa		3.12	□□□□□ -1.91
SUP35	YDR172W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
SUP35	YDR172W	ICS3	P47034	131 aa		3.12	□□□□□ -1.91
SUP35	YDR172W	YLR285C-A	Q3E771	56 aa		3.12	□□□□□ -1.91
SUP35	YDR172W	BSC4	P53841	131 aa		3.11	□□□□□ -1.91
SUP35	YDR172W	DDR2	P89113	61 aa		3.11	□□□□□ -1.91
SUP35	YDR172W	YHR007C-A	Q07074	71 aa		3.11	□□□□□ -1.91
SUP35	YDR172W	YPL038W-A	Q3E7B4	63 aa		3.11	□□□□□ -1.91
SUP35	YDR172W	YCR043C	P25361	127 aa		3.1	□□□□□ -1.91
SUP35	YDR172W	SPT4	P32914	102 aa	Predicted RBP	3.1	□□□□□ -1.91
SUP35	YDR172W	YGR164W	P53291	111 aa		3.1	□□□□□ -1.91
SUP35	YDR172W	YOL014W	Q08110	124 aa		3.1	□□□□□ -1.91
SUP35	YDR172W	RSM18	P40033	138 aa		3.09	□□□□□ -1.91
SUP35	YDR172W	RSM19	P53733	91 aa	Predicted RBP	3.09	□□□□□ -1.91
SUP35	YDR172W	SHH4	Q06236	168 aa		3.09	□□□□□ -1.91
SUP35	YDR172W	YHR213W-B	Q8TGK1	99 aa		3.09	□□□□□ -1.91
SUP35	YDR172W	RPL36B	O14455	100 aa	Known RBP	3.08	□□□□□ -1.92
SUP35	YDR172W	TDA2	P40045	126 aa		3.08	□□□□□ -1.92
SUP35	YDR172W	LCL2	Q08045	131 aa		3.08	□□□□□ -1.92
SUP35	YDR172W	YSY6	P38374	65 aa		3.08	□□□□□ -1.92
SUP35	YDR172W	EDC2	P40023	145 aa	Predicted RBP	3.07	□□□□□ -1.92
SUP35	YDR172W	YMR230W-A	Q3E7B5	62 aa		3.07	□□□□□ -1.92
SUP35	YDR172W	YOR072W	Q08486	104 aa		3.07	□□□□□ -1.92
SUP35	YDR172W	COX23	P38824	151 aa		3.06	□□□□□ -1.92
SUP35	YDR172W	ATP20	Q12233	115 aa		3.06	□□□□□ -1.92
SUP35	YDR172W	YJL133C-A	Q3E7A3	74 aa		3.06	□□□□□ -1.92
SUP35	YDR172W	YOR376W-A	Q3E805	51 aa		3.05	□□□□□ -1.92
SUP35	YDR172W	MIC10	Q96VH5	97 aa		3.05	□□□□□ -1.92
SUP35	YDR172W	YER187W	P40102	141 aa		3.05	□□□□□ -1.92
SUP35	YDR172W	YOR268C	Q08734	132 aa		3.05	□□□□□ -1.92
SUP35	YDR172W	TDA8	Q6B2U8	126 aa		3.05	□□□□□ -1.92
SUP35	YDR172W	YGL034C	P53186	121 aa		3.04	□□□□□ -1.92
SUP35	YDR172W	LCL1	Q02786	101 aa		3.04	□□□□□ -1.92
SUP35	YDR172W	ECM19	Q06011	112 aa		3.04	□□□□□ -1.92
SUP35	YDR172W	YEL045C	P32616	141 aa		3.03	□□□□□ -1.92
SUP35	YDR172W	YLR162W	Q06235	118 aa		3.02	□□□□□ -1.93
SUP35	YDR172W	YDR246W-A	Q3E763	66 aa		3.02	□□□□□ -1.93
SUP35	YDR172W	YBR027C	P38220	110 aa		3.02	□□□□□ -1.93
SUP35	YDR172W	YGR121W-A	Q3E816	71 aa		3.02	□□□□□ -1.93
SUP35	YDR172W	YJL197C-A	P0C5P0	93 aa		3	□□□□□ -1.93
SUP35	YDR172W	NOP10	Q6Q547	58 aa	Predicted RBP	3	□□□□□ -1.93
SUP35	YDR172W	SPG1	P50088	95 aa		2.98	□□□□□ -1.93
SUP35	YDR172W	AIM4	P38305	123 aa	Predicted RBP	2.97	□□□□□ -1.93
SUP35	YDR172W	YOR314W	Q12506	109 aa		2.97	□□□□□ -1.93
SUP35	YDR172W	YJR085C	P47131	105 aa	Known RBP	2.97	□□□□□ -1.93
SUP35	YDR172W	YOR381W-A	Q3E804	55 aa		2.96	□□□□□ -1.94
SUP35	YDR172W	DDR48	P18899	430 aa	Known RBP	2.96	□□□□□ -1.94
SUP35	YDR172W	YOL166W-A	Q8TGJ1	51 aa		2.95	□□□□□ -1.94
SUP35	YDR172W	YGL149W	P53116	101 aa		2.94	□□□□□ -1.94
SUP35	YDR172W	YAR064W	P39563	99 aa		2.94	□□□□□ -1.94
SUP35	YDR172W	YIL102C	P40488	101 aa		2.94	□□□□□ -1.94
SUP35	YDR172W	LIP1	Q03579	150 aa		2.93	□□□□□ -1.94
SUP35	YDR172W	HHF1	P02309	103 aa	Known RBP	2.92	□□□□□ -1.94
SUP35	YDR172W	YOL013W-A	P0C272	63 aa	Predicted RBP	2.92	□□□□□ -1.94
SUP35	YDR172W	YML100W-A	Q8TGT0	57 aa		2.92	□□□□□ -1.94
SUP35	YDR172W	YOL097W-A	Q3E7Y9	61 aa		2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms