RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W YFR009W-AP0C5M9 85 aa2.94□□□□□ -1.94
HSP42YDR171W RSM18P40033 138 aa2.94□□□□□ -1.94
HSP42YDR171W SFT1P43682 97 aa2.94□□□□□ -1.94
HSP42YDR171W RPL38P49167 78 aaKnown RBP2.94□□□□□ -1.94
HSP42YDR171W YMR320WQ04897 101 aa2.94□□□□□ -1.94
HSP42YDR171W YDL241WQ07738 123 aa2.94□□□□□ -1.94
HSP42YDR171W YMR122W-AQ3E842 84 aa2.94□□□□□ -1.94
HSP42YDR171W IRA1P18963 3092 aa2.94□□□□□ -1.94
HSP42YDR171W RPS11AP0CX47 156 aaKnown RBP2.93□□□□□ -1.94
HSP42YDR171W RPS11BP0CX48 156 aaKnown RBP2.93□□□□□ -1.94
HSP42YDR171W YFL019CP43576 117 aa2.93□□□□□ -1.94
HSP42YDR171W HOR7Q05827 59 aa2.93□□□□□ -1.94
HSP42YDR171W NOP10Q6Q547 58 aaPredicted RBP2.93□□□□□ -1.94
HSP42YDR171W YLR162WQ06235 118 aa2.92□□□□□ -1.94
HSP42YDR171W GCN1P33892 2672 aaKnown RBP2.91□□□□□ -1.94
HSP42YDR171W RPL26AP05743 127 aaKnown RBP2.91□□□□□ -1.94
HSP42YDR171W PEX22P39718 180 aa2.91□□□□□ -1.94
HSP42YDR171W YIR020CP40575 100 aa2.91□□□□□ -1.94
HSP42YDR171W RPL26BP53221 127 aaKnown RBP2.91□□□□□ -1.94
HSP42YDR171W YKL065W-AQ2V2P2 73 aa2.91□□□□□ -1.94
HSP42YDR171W YOL166W-AQ8TGJ1 51 aa2.91□□□□□ -1.94
HSP42YDR171W SPT4P32914 102 aaPredicted RBP2.9□□□□□ -1.95
HSP42YDR171W MVB12P42939 101 aa2.9□□□□□ -1.95
HSP42YDR171W ICS3P47034 131 aa2.9□□□□□ -1.95
HSP42YDR171W YGR240C-AQ3E786 66 aa2.9□□□□□ -1.95
HSP42YDR171W YGR121W-AQ3E816 71 aa2.9□□□□□ -1.95
HSP42YDR171W PRP8P33334 2413 aaKnown RBP2.9□□□□□ -1.95
HSP42YDR171W YHL005CP38752 130 aa2.89□□□□□ -1.95
HSP42YDR171W COX23P38824 151 aa2.89□□□□□ -1.95
HSP42YDR171W YOR381W-AQ3E804 55 aa2.89□□□□□ -1.95
HSP42YDR171W TAR1Q8TGM6 124 aa2.89□□□□□ -1.95
HSP42YDR171W FYV5P25585 152 aa2.88□□□□□ -1.95
HSP42YDR171W EDC2P40023 145 aaPredicted RBP2.88□□□□□ -1.95
HSP42YDR171W RPC10P40422 70 aa2.88□□□□□ -1.95
HSP42YDR171W YBL039W-BP0C268 59 aa2.87□□□□□ -1.95
HSP42YDR171W SMD1Q02260 146 aaPredicted RBP2.87□□□□□ -1.95
HSP42YDR171W RDS3Q06835 107 aaPredicted RBP2.87□□□□□ -1.95
HSP42YDR171W YOR268CQ08734 132 aa2.87□□□□□ -1.95
HSP42YDR171W RRT15Q3E811 62 aa2.87□□□□□ -1.95
HSP42YDR171W YGR035W-AQ45U48 73 aa2.87□□□□□ -1.95
HSP42YDR171W MIC10Q96VH5 97 aa2.87□□□□□ -1.95
HSP42YDR171W YPR010C-AA5Z2X5 72 aa2.86□□□□□ -1.95
HSP42YDR171W AQY2P0CD90 149 aa2.86□□□□□ -1.95
HSP42YDR171W RPS30AP0CX33 63 aaKnown RBP2.86□□□□□ -1.95
HSP42YDR171W RPS30BP0CX34 63 aaKnown RBP2.86□□□□□ -1.95
HSP42YDR171W YDR274CP87283 123 aa2.86□□□□□ -1.95
HSP42YDR171W YOL014WQ08110 124 aa2.86□□□□□ -1.95
HSP42YDR171W YBR230W-AQ3E762 66 aa2.86□□□□□ -1.95
HSP42YDR171W YMR122CQ03879 124 aa2.85□□□□□ -1.95
HSP42YDR171W YJL127C-BQ3E828 52 aa2.85□□□□□ -1.95
HSP42YDR171W YHR213W-BQ8TGK1 99 aa2.85□□□□□ -1.95
HSP42YDR171W TRA1P38811 3744 aa2.85□□□□□ -1.95
HSP42YDR171W SPC1P46965 94 aa2.84□□□□□ -1.95
HSP42YDR171W LIP1Q03579 150 aa2.84□□□□□ -1.95
HSP42YDR171W YPL278CQ08990 100 aa2.84□□□□□ -1.95
HSP42YDR171W YJL133C-AQ3E7A3 74 aa2.84□□□□□ -1.95
HSP42YDR171W OST5Q92316 86 aa2.84□□□□□ -1.95
HSP42YDR171W YER188C-AP0C0V2 99 aa2.83□□□□□ -1.96
HSP42YDR171W RPB9P27999 122 aa2.83□□□□□ -1.96
HSP42YDR171W YIL102CP40488 101 aa2.83□□□□□ -1.96
HSP42YDR171W TOR2P32600 2474 aaKnown RBP2.83□□□□□ -1.96
HSP42YDR171W YAR023CD6VPM8 179 aa2.82□□□□□ -1.96
HSP42YDR171W YNL042W-BQ3E7Z2 85 aa2.82□□□□□ -1.96
HSP42YDR171W YLR307C-AQ3E825 87 aa2.82□□□□□ -1.96
HSP42YDR171W HUB1Q6Q546 73 aa2.82□□□□□ -1.96
HSP42YDR171W YAL067W-AQ8TGK6 75 aa2.82□□□□□ -1.96
HSP42YDR171W YAL064WP39711 94 aa2.81□□□□□ -1.96
HSP42YDR171W ECM19Q06011 112 aa2.81□□□□□ -1.96
HSP42YDR171W UTP20P35194 2493 aaKnown RBP2.8□□□□□ -1.96
HSP42YDR171W RPL33AP05744 107 aaKnown RBP2.8□□□□□ -1.96
HSP42YDR171W YOL013W-AP0C272 63 aaPredicted RBP2.8□□□□□ -1.96
HSP42YDR171W YCR001WP25347 104 aa2.8□□□□□ -1.96
HSP42YDR171W YBL081WP38180 368 aaKnown RBP2.8□□□□□ -1.96
HSP42YDR171W RPL33BP41056 107 aaKnown RBP2.8□□□□□ -1.96
HSP42YDR171W YPR153WQ06537 140 aa2.8□□□□□ -1.96
HSP42YDR171W YHR212W-AP0CX91 67 aa2.79□□□□□ -1.96
HSP42YDR171W SDH6Q3E785 79 aa2.78□□□□□ -1.96
HSP42YDR171W Q0297Q9ZZV8 51 aa2.78□□□□□ -1.96
HSP42YDR171W DDR2P89113 61 aa2.77□□□□□ -1.97
HSP42YDR171W Q0032Q9ZZX7 96 aa2.77□□□□□ -1.97
HSP42YDR171W YHR125WP38831 101 aa2.76□□□□□ -1.97
HSP42YDR171W YGL034CP53186 121 aa2.76□□□□□ -1.97
HSP42YDR171W SGF11Q03067 99 aa2.76□□□□□ -1.97
HSP42YDR171W YCR095W-AQ3E787 52 aa2.76□□□□□ -1.97
HSP42YDR171W YML100W-AQ8TGT0 57 aa2.76□□□□□ -1.97
HSP42YDR171W MEC1P38111 2368 aa2.75□□□□□ -1.97
HSP42YDR171W YLR157W-DP0CE99 70 aa2.75□□□□□ -1.97
HSP42YDR171W YAR064WP39563 99 aa2.75□□□□□ -1.97
HSP42YDR171W YMR001C-AQ8TGS9 76 aa2.75□□□□□ -1.97
HSP42YDR171W YOR072WQ08486 104 aa2.74□□□□□ -1.97
HSP42YDR171W YGL041C-BQ3E750 60 aa2.74□□□□□ -1.97
HSP42YDR171W YOR376W-AQ3E805 51 aa2.74□□□□□ -1.97
HSP42YDR171W NUM1Q00402 2748 aa2.74□□□□□ -1.97
HSP42YDR171W SPG1P50088 95 aa2.73□□□□□ -1.97
HSP42YDR171W BSC4P53841 131 aa2.73□□□□□ -1.97
HSP42YDR171W YHR007C-AQ07074 71 aa2.73□□□□□ -1.97
HSP42YDR171W RTC6O14464 93 aa2.72□□□□□ -1.97
HSP42YDR171W YGL193CP53097 103 aa2.72□□□□□ -1.97
HSP42YDR171W YDR010CQ12426 110 aa2.72□□□□□ -1.97
HSP42YDR171W YJL197C-AP0C5P0 93 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms