RNA–Protein interactions for RNA: YCR073C

SSK22, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeastyeast

Gene SSK22, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK22YCR073C COX23P38824 151 aa3.92□□□□□ -1.78
SSK22YCR073C ICS3P47034 131 aa3.91□□□□□ -1.78
SSK22YCR073C NUM1Q00402 2748 aa3.91□□□□□ -1.78
SSK22YCR073C RPL36BO14455 100 aaKnown RBP3.91□□□□□ -1.78
SSK22YCR073C RPL33AP05744 107 aaKnown RBP3.91□□□□□ -1.78
SSK22YCR073C RPL36AP05745 100 aaPredicted RBP3.91□□□□□ -1.78
SSK22YCR073C RPL33BP41056 107 aaKnown RBP3.91□□□□□ -1.78
SSK22YCR073C YBR230W-AQ3E762 66 aa3.9□□□□□ -1.79
SSK22YCR073C YCR041WP37265 110 aa3.9□□□□□ -1.79
SSK22YCR073C YGR240C-AQ3E786 66 aa3.9□□□□□ -1.79
SSK22YCR073C YEL045CP32616 141 aa3.89□□□□□ -1.79
SSK22YCR073C SFT1P43682 97 aa3.89□□□□□ -1.79
SSK22YCR073C MVB12P42939 101 aa3.89□□□□□ -1.79
SSK22YCR073C YOR314WQ12506 109 aa3.89□□□□□ -1.79
SSK22YCR073C BET1P22804 142 aa3.88□□□□□ -1.79
SSK22YCR073C YHR212W-AP0CX91 67 aa3.88□□□□□ -1.79
SSK22YCR073C YMR320WQ04897 101 aa3.87□□□□□ -1.79
SSK22YCR073C GIS2P53849 153 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SSK22YCR073C YDR274CP87283 123 aa3.86□□□□□ -1.79
SSK22YCR073C YRA2P36036 203 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SSK22YCR073C YPR010C-AA5Z2X5 72 aa3.85□□□□□ -1.79
SSK22YCR073C ECM19Q06011 112 aa3.85□□□□□ -1.79
SSK22YCR073C FYV5P25585 152 aa3.84□□□□□ -1.79
SSK22YCR073C YHR213W-BQ8TGK1 99 aa3.84□□□□□ -1.79
SSK22YCR073C YKL183C-AQ3E765 70 aa3.84□□□□□ -1.79
SSK22YCR073C RPB9P27999 122 aa3.83□□□□□ -1.8
SSK22YCR073C EDC2P40023 145 aaPredicted RBP3.83□□□□□ -1.8
SSK22YCR073C RPS30AP0CX33 63 aaKnown RBP3.83□□□□□ -1.8
SSK22YCR073C RPS30BP0CX34 63 aaKnown RBP3.83□□□□□ -1.8
SSK22YCR073C YHL005CP38752 130 aa3.82□□□□□ -1.8
SSK22YCR073C RPL26AP05743 127 aaKnown RBP3.82□□□□□ -1.8
SSK22YCR073C RPL26BP53221 127 aaKnown RBP3.82□□□□□ -1.8
SSK22YCR073C SMD1Q02260 146 aaPredicted RBP3.81□□□□□ -1.8
SSK22YCR073C YNL277W-AQ3E7Z0 62 aa3.81□□□□□ -1.8
SSK22YCR073C SPT4P32914 102 aaPredicted RBP3.81□□□□□ -1.8
SSK22YCR073C YCR001WP25347 104 aa3.8□□□□□ -1.8
SSK22YCR073C RPL38P49167 78 aaKnown RBP3.8□□□□□ -1.8
SSK22YCR073C YAL064WP39711 94 aa3.8□□□□□ -1.8
SSK22YCR073C MIC10Q96VH5 97 aa3.8□□□□□ -1.8
SSK22YCR073C TOR2P32600 2474 aaKnown RBP3.8□□□□□ -1.8
SSK22YCR073C YOL013W-AP0C272 63 aaPredicted RBP3.79□□□□□ -1.8
SSK22YCR073C YER188C-AP0C0V2 99 aa3.79□□□□□ -1.8
SSK22YCR073C YMR122CQ03879 124 aa3.79□□□□□ -1.8
SSK22YCR073C YBL039W-BP0C268 59 aa3.78□□□□□ -1.8
SSK22YCR073C YJL133C-AQ3E7A3 74 aa3.78□□□□□ -1.8
SSK22YCR073C YJL127C-BQ3E828 52 aa3.78□□□□□ -1.8
SSK22YCR073C HOT13P36078 116 aa3.78□□□□□ -1.8
SSK22YCR073C AQY2P0CD90 149 aa3.77□□□□□ -1.81
SSK22YCR073C YNL042W-BQ3E7Z2 85 aa3.77□□□□□ -1.81
SSK22YCR073C DIF1O13577 133 aa3.77□□□□□ -1.81
SSK22YCR073C TDA2P40045 126 aa3.77□□□□□ -1.81
SSK22YCR073C LIP1Q03579 150 aa3.77□□□□□ -1.81
SSK22YCR073C YBR126W-AQ8TGU7 68 aa3.76□□□□□ -1.81
SSK22YCR073C YOR381W-AQ3E804 55 aa3.76□□□□□ -1.81
SSK22YCR073C YGL034CP53186 121 aa3.75□□□□□ -1.81
SSK22YCR073C MMS2P53152 137 aa3.75□□□□□ -1.81
SSK22YCR073C YDL012CQ12489 107 aa3.75□□□□□ -1.81
SSK22YCR073C YKL065W-AQ2V2P2 73 aa3.74□□□□□ -1.81
SSK22YCR073C AUA1P32450 94 aa3.74□□□□□ -1.81
SSK22YCR073C TIM10P87108 93 aa3.74□□□□□ -1.81
SSK22YCR073C YGL193CP53097 103 aa3.73□□□□□ -1.81
SSK22YCR073C RTG1P32607 177 aa3.72□□□□□ -1.81
SSK22YCR073C YHR125WP38831 101 aa3.71□□□□□ -1.81
SSK22YCR073C YDR010CQ12426 110 aa3.71□□□□□ -1.81
SSK22YCR073C YMR230W-AQ3E7B5 62 aa3.71□□□□□ -1.81
SSK22YCR073C SPO24Q3E752 67 aa3.7□□□□□ -1.82
SSK22YCR073C YBR144CP34215 104 aa3.7□□□□□ -1.82
SSK22YCR073C YPR153WQ06537 140 aa3.7□□□□□ -1.82
SSK22YCR073C TSC3Q3E790 80 aa3.69□□□□□ -1.82
SSK22YCR073C PEX22P39718 180 aa3.67□□□□□ -1.82
SSK22YCR073C YAR023CD6VPM8 179 aa3.66□□□□□ -1.82
SSK22YCR073C YHR007C-AQ07074 71 aa3.66□□□□□ -1.82
SSK22YCR073C PRP8P33334 2413 aaKnown RBP3.66□□□□□ -1.82
SSK22YCR073C BSC4P53841 131 aa3.66□□□□□ -1.82
SSK22YCR073C SPC1P46965 94 aa3.65□□□□□ -1.82
SSK22YCR073C DDR2P89113 61 aa3.65□□□□□ -1.82
SSK22YCR073C YAR064WP39563 99 aa3.65□□□□□ -1.83
SSK22YCR073C YIL156W-BQ2V2P4 73 aa3.65□□□□□ -1.83
SSK22YCR073C YGL015CP33199 130 aa3.64□□□□□ -1.83
SSK22YCR073C SGF11Q03067 99 aa3.64□□□□□ -1.83
SSK22YCR073C YOR072WQ08486 104 aa3.63□□□□□ -1.83
SSK22YCR073C YOR376W-AQ3E805 51 aa3.63□□□□□ -1.83
SSK22YCR073C OST5Q92316 86 aa3.63□□□□□ -1.83
SSK22YCR073C SAP30P38429 201 aa3.62□□□□□ -1.83
SSK22YCR073C RPL43AP0CX25 92 aaKnown RBP3.61□□□□□ -1.83
SSK22YCR073C RPL43BP0CX26 92 aa3.61□□□□□ -1.83
SSK22YCR073C YLR255CO13574 117 aa3.61□□□□□ -1.83
SSK22YCR073C RTC6O14464 93 aa3.6□□□□□ -1.83
SSK22YCR073C YML100W-AQ8TGT0 57 aa3.6□□□□□ -1.83
SSK22YCR073C YMR001C-AQ8TGS9 76 aa3.59□□□□□ -1.83
SSK22YCR073C CUP1-1P0CX80 61 aa3.59□□□□□ -1.84
SSK22YCR073C CUP1-2P0CX81 61 aa3.59□□□□□ -1.84
SSK22YCR073C YBR027CP38220 110 aa3.57□□□□□ -1.84
SSK22YCR073C UTP20P35194 2493 aaKnown RBP3.57□□□□□ -1.84
SSK22YCR073C YIL102CP40488 101 aa3.57□□□□□ -1.84
SSK22YCR073C YGL149WP53116 101 aa3.55□□□□□ -1.84
SSK22YCR073C Q0032Q9ZZX7 96 aa3.55□□□□□ -1.84
SSK22YCR073C LCL2Q08045 131 aa3.54□□□□□ -1.84
SSK22YCR073C YLR157W-DP0CE99 70 aa3.54□□□□□ -1.84
SSK22YCR073C YCR043CP25361 127 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms