RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W GCN1P33892 2672 aaKnown RBP5.14□□□□□ -1.59
TOD6YBL054W AQY2P0CD90 149 aa5.13□□□□□ -1.59
TOD6YBL054W YCR001WP25347 104 aa5.13□□□□□ -1.59
TOD6YBL054W YOL166W-AQ8TGJ1 51 aa5.13□□□□□ -1.59
TOD6YBL054W URA2P07259 2214 aaKnown RBP5.13□□□□□ -1.59
TOD6YBL054W FYV5P25585 152 aa5.12□□□□□ -1.59
TOD6YBL054W COX23P38824 151 aa5.12□□□□□ -1.59
TOD6YBL054W YBL039W-BP0C268 59 aa5.12□□□□□ -1.59
TOD6YBL054W RPC10P40422 70 aa5.12□□□□□ -1.59
TOD6YBL054W SFT1P43682 97 aa5.12□□□□□ -1.59
TOD6YBL054W YLR162WQ06235 118 aa5.12□□□□□ -1.59
TOD6YBL054W YOR268CQ08734 132 aa5.12□□□□□ -1.59
TOD6YBL054W YGR121W-AQ3E816 71 aa5.12□□□□□ -1.59
TOD6YBL054W Q0297Q9ZZV8 51 aa5.12□□□□□ -1.59
TOD6YBL054W YHL005CP38752 130 aa5.11□□□□□ -1.59
TOD6YBL054W RDS3Q06835 107 aaPredicted RBP5.11□□□□□ -1.59
TOD6YBL054W YBR230W-AQ3E762 66 aa5.11□□□□□ -1.59
TOD6YBL054W RRT15Q3E811 62 aa5.11□□□□□ -1.59
TOD6YBL054W YHR212W-AP0CX91 67 aa5.1□□□□□ -1.59
TOD6YBL054W YBL081WP38180 368 aaKnown RBP5.1□□□□□ -1.59
TOD6YBL054W YAL064WP39711 94 aa5.1□□□□□ -1.59
TOD6YBL054W EDC2P40023 145 aaPredicted RBP5.1□□□□□ -1.59
TOD6YBL054W YJL127C-BQ3E828 52 aa5.1□□□□□ -1.59
TOD6YBL054W YHR213W-BQ8TGK1 99 aa5.1□□□□□ -1.59
TOD6YBL054W YOR381W-AQ3E804 55 aa5.09□□□□□ -1.59
TOD6YBL054W YNL277W-AQ3E7Z0 62 aa5.08□□□□□ -1.6
TOD6YBL054W YIL102CP40488 101 aa5.08□□□□□ -1.6
TOD6YBL054W YPR010C-AA5Z2X5 72 aa5.07□□□□□ -1.6
TOD6YBL054W RPS30AP0CX33 63 aaKnown RBP5.07□□□□□ -1.6
TOD6YBL054W RPS30BP0CX34 63 aaKnown RBP5.07□□□□□ -1.6
TOD6YBL054W IGD1P43598 195 aa5.07□□□□□ -1.6
TOD6YBL054W YJL133C-AQ3E7A3 74 aa5.07□□□□□ -1.6
TOD6YBL054W YBR056W-AI2HB52 66 aa5.05□□□□□ -1.6
TOD6YBL054W YDR274CP87283 123 aa5.05□□□□□ -1.6
TOD6YBL054W LIP1Q03579 150 aa5.05□□□□□ -1.6
TOD6YBL054W MLF3P32047 452 aa5.04□□□□□ -1.6
TOD6YBL054W SPC1P46965 94 aa5.04□□□□□ -1.6
TOD6YBL054W TOR2P32600 2474 aaKnown RBP5.04□□□□□ -1.6
TOD6YBL054W YNL042W-BQ3E7Z2 85 aa5.04□□□□□ -1.6
TOD6YBL054W YLR307C-AQ3E825 87 aa5.04□□□□□ -1.6
TOD6YBL054W YGR035W-AQ45U48 73 aa5.04□□□□□ -1.6
TOD6YBL054W YAR023CD6VPM8 179 aa5.03□□□□□ -1.6
TOD6YBL054W RPL33AP05744 107 aaKnown RBP5.03□□□□□ -1.6
TOD6YBL054W RPB9P27999 122 aa5.03□□□□□ -1.6
TOD6YBL054W SPT4P32914 102 aaPredicted RBP5.03□□□□□ -1.6
TOD6YBL054W RPL33BP41056 107 aaKnown RBP5.03□□□□□ -1.6
TOD6YBL054W YER145C-AA0A023PYF4 145 aa5.02□□□□□ -1.61
TOD6YBL054W YBR144CP34215 104 aa5.02□□□□□ -1.61
TOD6YBL054W YKL065W-AQ2V2P2 73 aa5.02□□□□□ -1.61
TOD6YBL054W HHF1P02309 103 aaKnown RBP5.01□□□□□ -1.61
TOD6YBL054W YMR122CQ03879 124 aa5.01□□□□□ -1.61
TOD6YBL054W ECM19Q06011 112 aa5.01□□□□□ -1.61
TOD6YBL054W MIC10Q96VH5 97 aa5.01□□□□□ -1.61
TOD6YBL054W DIF1O13577 133 aa5□□□□□ -1.61
TOD6YBL054W Q0032Q9ZZX7 96 aa4.99□□□□□ -1.61
TOD6YBL054W HOT13P36078 116 aa4.99□□□□□ -1.61
TOD6YBL054W PEX22P39718 180 aa4.99□□□□□ -1.61
TOD6YBL054W SGF11Q03067 99 aa4.99□□□□□ -1.61
TOD6YBL054W YDR115WQ04598 105 aa4.99□□□□□ -1.61
TOD6YBL054W YEL045CP32616 141 aa4.97□□□□□ -1.61
TOD6YBL054W OST5Q92316 86 aa4.97□□□□□ -1.61
TOD6YBL054W YER188C-AP0C0V2 99 aa4.95□□□□□ -1.62
TOD6YBL054W YOL013W-AP0C272 63 aaPredicted RBP4.95□□□□□ -1.62
TOD6YBL054W YHR007C-AQ07074 71 aa4.94□□□□□ -1.62
TOD6YBL054W BSC4P53841 131 aa4.93□□□□□ -1.62
TOD6YBL054W YPR153WQ06537 140 aa4.93□□□□□ -1.62
TOD6YBL054W YOR072WQ08486 104 aa4.93□□□□□ -1.62
TOD6YBL054W SNA2P56508 79 aa4.92□□□□□ -1.62
TOD6YBL054W YLL066W-BQ8TGJ7 56 aa4.92□□□□□ -1.62
TOD6YBL054W YBR182C-AQ8TGU6 64 aa4.92□□□□□ -1.62
TOD6YBL054W DDR2P89113 61 aa4.91□□□□□ -1.62
TOD6YBL054W RTC6O14464 93 aa4.9□□□□□ -1.63
TOD6YBL054W YAR064WP39563 99 aa4.9□□□□□ -1.63
TOD6YBL054W YDR010CQ12426 110 aa4.9□□□□□ -1.63
TOD6YBL054W YGL041C-BQ3E750 60 aa4.89□□□□□ -1.63
TOD6YBL054W SDH6Q3E785 79 aa4.89□□□□□ -1.63
TOD6YBL054W HUB1Q6Q546 73 aa4.89□□□□□ -1.63
TOD6YBL054W PRP8P33334 2413 aaKnown RBP4.89□□□□□ -1.63
TOD6YBL054W YLR157W-DP0CE99 70 aa4.88□□□□□ -1.63
TOD6YBL054W TEL1P38110 2787 aa4.88□□□□□ -1.63
TOD6YBL054W YHR125WP38831 101 aa4.87□□□□□ -1.63
TOD6YBL054W MMS2P53152 137 aa4.87□□□□□ -1.63
TOD6YBL054W GIS2P53849 153 aaKnown RBP RIP-Chip data4.86□□□□□ -1.63not detected
TOD6YBL054W AUA1P32450 94 aa4.85□□□□□ -1.63
TOD6YBL054W YGL193CP53097 103 aa4.85□□□□□ -1.63
TOD6YBL054W YMR001C-AQ8TGS9 76 aa4.85□□□□□ -1.63
TOD6YBL054W YCR095W-AQ3E787 52 aa4.84□□□□□ -1.63
TOD6YBL054W YOR376W-AQ3E805 51 aa4.84□□□□□ -1.63
TOD6YBL054W YJL197C-AP0C5P0 93 aa4.83□□□□□ -1.64
TOD6YBL054W YCR043CP25361 127 aa4.81□□□□□ -1.64
TOD6YBL054W YMR230W-AQ3E7B5 62 aa4.81□□□□□ -1.64
TOD6YBL054W YGL034CP53186 121 aa4.8□□□□□ -1.64
TOD6YBL054W UTP20P35194 2493 aaKnown RBP4.8□□□□□ -1.64
TOD6YBL054W MEC1P38111 2368 aa4.78□□□□□ -1.64
TOD6YBL054W RPL43AP0CX25 92 aaKnown RBP4.78□□□□□ -1.64
TOD6YBL054W RPL43BP0CX26 92 aa4.78□□□□□ -1.64
TOD6YBL054W YBR027CP38220 110 aa4.78□□□□□ -1.64
TOD6YBL054W YML100W-AQ8TGT0 57 aa4.77□□□□□ -1.65
TOD6YBL054W YIL156W-BQ2V2P4 73 aa4.75□□□□□ -1.65
TOD6YBL054W YDL012CQ12489 107 aa4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms