RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C SMD1Q02260 146 aaPredicted RBP3.92□□□□□ -1.78
RFA1YAR007C YLR162WQ06235 118 aa3.92□□□□□ -1.78
RFA1YAR007C YDR182W-AQ3E796 67 aa3.92□□□□□ -1.78
RFA1YAR007C YHL005CP38752 130 aa3.91□□□□□ -1.78
RFA1YAR007C YNL162W-AQ3E7A8 72 aa3.91□□□□□ -1.78
RFA1YAR007C YNL277W-AQ3E7Z0 62 aa3.91□□□□□ -1.78
RFA1YAR007C YOR381W-AQ3E804 55 aa3.91□□□□□ -1.78
RFA1YAR007C YCR041WP37265 110 aa3.89□□□□□ -1.79
RFA1YAR007C YDL241WQ07738 123 aa3.89□□□□□ -1.79
RFA1YAR007C RPS30AP0CX33 63 aaKnown RBP3.88□□□□□ -1.79
RFA1YAR007C RPS30BP0CX34 63 aaKnown RBP3.88□□□□□ -1.79
RFA1YAR007C YCR001WP25347 104 aa3.88□□□□□ -1.79
RFA1YAR007C COX23P38824 151 aa3.88□□□□□ -1.79
RFA1YAR007C FYV5P25585 152 aa3.88□□□□□ -1.79
RFA1YAR007C MIC10Q96VH5 97 aa3.88□□□□□ -1.79
RFA1YAR007C AQY2P0CD90 149 aa3.87□□□□□ -1.79
RFA1YAR007C YBL081WP38180 368 aaKnown RBP3.87□□□□□ -1.79
RFA1YAR007C YPL278CQ08990 100 aa3.87□□□□□ -1.79
RFA1YAR007C YBR230W-AQ3E762 66 aa3.87□□□□□ -1.79
RFA1YAR007C YGR240C-AQ3E786 66 aa3.87□□□□□ -1.79
RFA1YAR007C YHR213W-BQ8TGK1 99 aa3.87□□□□□ -1.79
RFA1YAR007C YBL039W-BP0C268 59 aa3.86□□□□□ -1.79
RFA1YAR007C EDC2P40023 145 aaPredicted RBP3.86□□□□□ -1.79
RFA1YAR007C RPC10P40422 70 aa3.86□□□□□ -1.79
RFA1YAR007C YIL102CP40488 101 aa3.86□□□□□ -1.79
RFA1YAR007C YDR274CP87283 123 aa3.86□□□□□ -1.79
RFA1YAR007C YGR035W-AQ45U48 73 aa3.86□□□□□ -1.79
RFA1YAR007C YBR126W-AQ8TGU7 68 aa3.86□□□□□ -1.79
RFA1YAR007C YPR010C-AA5Z2X5 72 aa3.86□□□□□ -1.79
RFA1YAR007C SPT4P32914 102 aaPredicted RBP3.86□□□□□ -1.79
RFA1YAR007C YAL064WP39711 94 aa3.86□□□□□ -1.79
RFA1YAR007C YJL127C-BQ3E828 52 aa3.86□□□□□ -1.79
RFA1YAR007C LIP1Q03579 150 aa3.85□□□□□ -1.79
RFA1YAR007C SPO24Q3E752 67 aa3.85□□□□□ -1.79
RFA1YAR007C HHF1P02309 103 aaKnown RBP3.84□□□□□ -1.79
RFA1YAR007C IGD1P43598 195 aa3.84□□□□□ -1.79
RFA1YAR007C YJL133C-AQ3E7A3 74 aa3.84□□□□□ -1.79
RFA1YAR007C YHR212W-AP0CX91 67 aa3.84□□□□□ -1.8
RFA1YAR007C YMR122CQ03879 124 aa3.84□□□□□ -1.8
RFA1YAR007C RDS3Q06835 107 aaPredicted RBP3.84□□□□□ -1.8
RFA1YAR007C GCN1P33892 2672 aaKnown RBP3.83□□□□□ -1.8
RFA1YAR007C YBR056W-AI2HB52 66 aa3.83□□□□□ -1.8
RFA1YAR007C Q0297Q9ZZV8 51 aa3.83□□□□□ -1.8
RFA1YAR007C YAR023CD6VPM8 179 aa3.81□□□□□ -1.8
RFA1YAR007C SPC1P46965 94 aa3.81□□□□□ -1.8
RFA1YAR007C YKL065W-AQ2V2P2 73 aa3.81□□□□□ -1.8
RFA1YAR007C YLR307C-AQ3E825 87 aa3.81□□□□□ -1.8
RFA1YAR007C YER188C-AP0C0V2 99 aa3.8□□□□□ -1.8
RFA1YAR007C OST5Q92316 86 aa3.8□□□□□ -1.8
RFA1YAR007C DIF1O13577 133 aa3.79□□□□□ -1.8
RFA1YAR007C ECM19Q06011 112 aa3.79□□□□□ -1.8
RFA1YAR007C RPL33AP05744 107 aaKnown RBP3.79□□□□□ -1.8
RFA1YAR007C RPB9P27999 122 aa3.79□□□□□ -1.8
RFA1YAR007C HOT13P36078 116 aa3.79□□□□□ -1.8
RFA1YAR007C PEX22P39718 180 aa3.79□□□□□ -1.8
RFA1YAR007C RPL33BP41056 107 aaKnown RBP3.79□□□□□ -1.8
RFA1YAR007C YPR153WQ06537 140 aa3.79□□□□□ -1.8
RFA1YAR007C YNL042W-BQ3E7Z2 85 aa3.79□□□□□ -1.8
RFA1YAR007C YOL013W-AP0C272 63 aaPredicted RBP3.77□□□□□ -1.81
RFA1YAR007C YER145C-AA0A023PYF4 145 aa3.77□□□□□ -1.81
RFA1YAR007C YEL045CP32616 141 aa3.77□□□□□ -1.81
RFA1YAR007C YDR115WQ04598 105 aa3.77□□□□□ -1.81
RFA1YAR007C YDR010CQ12426 110 aa3.77□□□□□ -1.81
RFA1YAR007C YOR376W-AQ3E805 51 aa3.76□□□□□ -1.81
RFA1YAR007C Q0032Q9ZZX7 96 aa3.76□□□□□ -1.81
RFA1YAR007C MMS2P53152 137 aa3.75□□□□□ -1.81
RFA1YAR007C YBR144CP34215 104 aa3.75□□□□□ -1.81
RFA1YAR007C YGL034CP53186 121 aa3.75□□□□□ -1.81
RFA1YAR007C YHR007C-AQ07074 71 aa3.75□□□□□ -1.81
RFA1YAR007C BSC4P53841 131 aa3.74□□□□□ -1.81
RFA1YAR007C SGF11Q03067 99 aa3.73□□□□□ -1.81
RFA1YAR007C PRP8P33334 2413 aaKnown RBP3.72□□□□□ -1.81
RFA1YAR007C YLR157W-DP0CE99 70 aa3.72□□□□□ -1.81
RFA1YAR007C YLL066W-BQ8TGJ7 56 aa3.72□□□□□ -1.81
RFA1YAR007C YOR072WQ08486 104 aa3.71□□□□□ -1.82
RFA1YAR007C SDH6Q3E785 79 aa3.71□□□□□ -1.82
RFA1YAR007C TOR2P32600 2474 aaKnown RBP3.71□□□□□ -1.82
RFA1YAR007C YAR064WP39563 99 aa3.71□□□□□ -1.82
RFA1YAR007C SNA2P56508 79 aa3.71□□□□□ -1.82
RFA1YAR007C HUB1Q6Q546 73 aa3.71□□□□□ -1.82
RFA1YAR007C TEL1P38110 2787 aa3.7□□□□□ -1.82
RFA1YAR007C YHR125WP38831 101 aa3.7□□□□□ -1.82
RFA1YAR007C GIS2P53849 153 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
RFA1YAR007C DDR2P89113 61 aa3.7□□□□□ -1.82
RFA1YAR007C YMR001C-AQ8TGS9 76 aa3.7□□□□□ -1.82
RFA1YAR007C AUA1P32450 94 aa3.69□□□□□ -1.82
RFA1YAR007C YCR095W-AQ3E787 52 aa3.69□□□□□ -1.82
RFA1YAR007C YBR182C-AQ8TGU6 64 aa3.69□□□□□ -1.82
RFA1YAR007C YML100W-AQ8TGT0 57 aa3.68□□□□□ -1.82
RFA1YAR007C YMR230W-AQ3E7B5 62 aa3.67□□□□□ -1.82
RFA1YAR007C RTC6O14464 93 aa3.67□□□□□ -1.82
RFA1YAR007C YJL197C-AP0C5P0 93 aa3.67□□□□□ -1.82
RFA1YAR007C YIL156W-BQ2V2P4 73 aa3.67□□□□□ -1.82
RFA1YAR007C YGL193CP53097 103 aa3.66□□□□□ -1.82
RFA1YAR007C YCR043CP25361 127 aa3.65□□□□□ -1.82
RFA1YAR007C YGL041C-BQ3E750 60 aa3.64□□□□□ -1.83
RFA1YAR007C YBR027CP38220 110 aa3.63□□□□□ -1.83
RFA1YAR007C UTP20P35194 2493 aaKnown RBP3.62□□□□□ -1.83
RFA1YAR007C YDL012CQ12489 107 aa3.61□□□□□ -1.83
RFA1YAR007C YFR032C-BQ8TGU2 87 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms