RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 DSC3Q14574 896 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 ERICH1Q86X53 443 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 ZDHHC17Q8IUH5 632 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 MAML2Q8IZL2 1156 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-234ENST00000642041 TOP6BLQ8N6T0 577 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 FEZF2Q8TBJ5 459 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 STK32AQ8WU08 396 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 NUP85Q9BW27 656 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 SFXN1Q9H9B4 322 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 IP6K2Q9UHH9 426 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 TFR2Q9UP52 801 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 IRAK3Q9Y616 596 aa18.13■□□□□ 0.49
PHGDH-234ENST00000642041 PGRMC1O00264 195 aaKnown RBP18.12■□□□□ 0.49
PHGDH-234ENST00000642041 BUB1BO60566 1050 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-234ENST00000642041 SRFP11831 508 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 SLC8A3P57103 927 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 PTP4A2Q12974 167 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 ZNF268Q14587 947 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-234ENST00000642041 ERCC6LQ2NKX8 1250 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 TEX35Q5T0J7 233 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 C9orf57Q5W0N0 161 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 PLEKHA7Q6IQ23 1121 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 TMEM86AQ8N2M4 240 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 RASGEF1CQ8N431 466 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 EIF1ADQ8N9N8 165 aaKnown RBP18.12■□□□□ 0.49
PHGDH-234ENST00000642041 IPO4Q8TEX9 1081 aaKnown RBP18.12■□□□□ 0.49
PHGDH-234ENST00000642041 FNIP1Q8TF40 1166 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 HNRNPLLQ8WVV9 542 aaKnown RBP18.12■□□□□ 0.49
PHGDH-234ENST00000642041 CYFIP2Q96F07 1278 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 MMS19Q96T76 1030 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 ARID3AQ99856 593 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 NXF3Q9H4D5 531 aaKnown RBP18.12■□□□□ 0.49
PHGDH-234ENST00000642041 HOMER3Q9NSC5 361 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 RNF19AQ9NV58 838 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 KANSL3Q9P2N6 904 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 ALG6Q9Y672 507 aa18.12■□□□□ 0.49
PHGDH-234ENST00000642041 A0A0U1RQF3 1178 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-234ENST00000642041 KCNK3O14649 394 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 HUS1O60921 280 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 THP07101 528 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 CD58P19256 250 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 PIGHQ14442 188 aaPredicted RBP18.11■□□□□ 0.49
PHGDH-234ENST00000642041 NAA35Q5VZE5 725 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 WDR93Q6P2C0 686 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 MON1BQ7L1V2 547 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 SLC44A3Q8N4M1 653 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 SPATA4Q8NEY3 305 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 CCDC26Q8TAB7 109 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 RSAD2Q8WXG1 361 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 TMEM51Q9NW97 253 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 TAS2R14Q9NYV8 317 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 HESX1Q9UBX0 185 aa18.11■□□□□ 0.49
PHGDH-234ENST00000642041 KPNA7A9QM74 516 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 SPOPO43791 374 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 FTCDO95954 541 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 GLULP15104 373 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 CD19P15391 556 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 TGM1P22735 817 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 RAD23BP54727 409 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 RWDD2BP57060 319 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 SEL1L2Q5TEA6 688 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 LRRC38Q5VT99 294 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 LCLAT1Q6UWP7 414 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 MAATS1Q7Z4T9 603 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 ABI1Q8IZP0 508 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 VPS52Q8N1B4 723 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 SMG8Q8ND04 991 aaKnown RBP18.1■□□□□ 0.49
PHGDH-234ENST00000642041 APPL2Q8NEU8 664 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 NXPE3Q969Y0 559 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 HEXIM2Q96MH2 286 aaKnown RBP18.1■□□□□ 0.49
PHGDH-234ENST00000642041 APOL6Q9BWW8 343 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 ZBP1Q9H171 429 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 FEZ2Q9UHY8 353 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-234ENST00000642041 FBXO4Q9UKT5 387 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 DSEQ9UL01 958 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 RAB21Q9UL25 225 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 PCDHGA2Q9Y5H1 932 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 PCDHA3Q9Y5H8 950 aa18.1■□□□□ 0.49
PHGDH-234ENST00000642041 CNOT1A5YKK6 2376 aaKnown RBP18.09■□□□□ 0.49
PHGDH-234ENST00000642041 LHX1P48742 406 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 PPM1JQ5JR12 505 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 TMCO3Q6UWJ1 677 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 CRYBG2Q8N1P7 616 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 C3orf20Q8ND61 904 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 GPR152Q8TDT2 470 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 AUTS2Q8WXX7 1259 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 C18orf8Q96DM3 657 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 SNX25Q9H3E2 840 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 OSGEPQ9NPF4 335 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.09■□□□□ 0.492e-20■■■■■ 347.8
PHGDH-234ENST00000642041 ARHGEF3Q9NR81 526 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 USP18Q9UMW8 372 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 SNX9Q9Y5X1 595 aa18.09■□□□□ 0.49
PHGDH-234ENST00000642041 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.49
PHGDH-234ENST00000642041 INPPL1O15357 1258 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 PSTPIP1O43586 416 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 CEP104O60308 925 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 PROSCO94903 275 aa18.08■□□□□ 0.48
PHGDH-234ENST00000642041 CTSAP10619 480 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms