RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-222	ENST00000641321	NUP88	Q99567	741 aa	Predicted RBP	6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	RIOK1	Q9BRS2	568 aa	Known RBP	6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	PIH1D3	Q9NQM4	214 aa	Known RBP	6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	ATP8A2	Q9NTI2	1148 aa		6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	CYP39A1	Q9NYL5	469 aa		6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	NYAP2	Q9P242	653 aa		6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	SH3BP1	Q9Y3L3	701 aa		6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	PCDHA8	Q9Y5H6	950 aa		6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	FLNB	O75369	2602 aa	Known RBP	6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	CEP295	Q9C0D2	2601 aa		6.24	□□□□□ -1.41
CASC19-222	ENST00000641321	ZFYVE26	Q68DK2	2539 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	FAM221B	A6H8Z2	402 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	GOLGA8B	A8MQT2	603 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	NDUFB10	O96000	172 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	PROS1	P07225	676 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	MMP3	P08254	477 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	TXN	P10599	105 aa	Known RBP	6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	ALAS1	P13196	640 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	FBL	P22087	321 aa	Known RBP	6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	STAT2	P52630	851 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	GUCY1A3	Q02108	690 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	COL10A1	Q03692	680 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	MTX1	Q13505	466 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	DGKD	Q16760	1214 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	TRIM71	Q2Q1W2	868 aa	Known RBP	6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	KLHDC10	Q6PID8	442 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	TMEM184A	Q6ZMB5	413 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	C16orf86	Q6ZW13	317 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	RBM23	Q86U06	439 aa	Known RBP	6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	FAM160B2	Q86V87	743 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	GPATCH11	Q8N954	259 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	TDRD5	Q8NAT2	981 aa	Known RBP	6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	PCDH19	Q8TAB3	1148 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	ATP8B4	Q8TF62	1192 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	CHURC1	Q8WUH1	139 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	POF1B	Q8WVV4	589 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	DYNLL2	Q96FJ2	89 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	SIRPG	Q9P1W8	387 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	PTGFRN	Q9P2B2	879 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	HDAC6	Q9UBN7	1215 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	CBLC	Q9ULV8	474 aa		6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	DSP	P15924	2871 aa	Known RBP	6.23	□□□□□ -1.41
CASC19-222	ENST00000641321	C2orf16	Q68DN1	1984 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	HMGB1P1	B2RPK0	211 aa	Predicted RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	C2CD4D	B7Z1M9	353 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	PI15	O43692	258 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	AMY2A	P04746	511 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	LINC00271	P0C7V0	271 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SP9	P0CG40	484 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SRGAP2C	P0DJJ0	459 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	AMY2B	P19961	511 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SP100	P23497	879 aa	Predicted RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	APEX1	P27695	318 aa	Known RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	THPO	P40225	353 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	TEC	P42680	631 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	MTHFR	P42898	656 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SHC2	P98077	582 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	ITIH3	Q06033	890 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	IK	Q13123	557 aa	Predicted RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	CAMK1	Q14012	370 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	TTF1	Q15361	905 aa	Predicted RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	DUSP6	Q16828	381 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	ANKRD54	Q6NXT1	300 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	LRSAM1	Q6UWE0	723 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SUMF1	Q8NBK3	374 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	GMCL1P1	Q8NEA9	526 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SPPL3	Q8TCT6	385 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SDR42E1	Q8WUS8	393 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	GCDH	Q92947	438 aa	Predicted RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	NAF1	Q96HR8	494 aa	Known RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	ANP32E	Q9BTT0	268 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	AMN	Q9BXJ7	453 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	RIOX1	Q9H6W3	641 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	AGO3	Q9H9G7	860 aa	Known RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	SNTG2	Q9NY99	539 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	ZNHIT2	Q9UHR6	403 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	USP18	Q9UMW8	372 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	MRPS23	Q9Y3D9	190 aa	Known RBP	6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	CACNA1I	Q9P0X4	2223 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	ITPR1	Q14643	2758 aa		6.22	□□□□□ -1.41
CASC19-222	ENST00000641321	GREB1	Q4ZG55	1949 aa		6.21	□□□□□ -1.41
CASC19-222	ENST00000641321	SLC30A4	O14863	429 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	F2	P00734	622 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	GH1	P01241	217 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	ITGB1	P05556	798 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	GNAI3	P08754	354 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	CYP2D6	P10635	497 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	SCNN1G	P51170	649 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	JAM2	P57087	298 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	TDG	Q13569	410 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	PTPA	Q15257	358 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	ELAVL1	Q15717	326 aa	Known RBP	6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	KIAA0753	Q2KHM9	967 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	C12orf60	Q5U649	245 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321		Q6ZRM9	215 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	SERINC5	Q86VE9	423 aa		6.21	□□□□□ -1.42
CASC19-222	ENST00000641321	ZC3H7A	Q8IWR0	971 aa	Known RBP	6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms