RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 TMEM169Q96HH4 297 aa12.96□□□□□ -0.34
TNFAIP3-206ENST00000612899 CD274Q9NZQ7 290 aa12.96□□□□□ -0.34
TNFAIP3-206ENST00000612899 PHTF1Q9UMS5 762 aa12.96□□□□□ -0.34
TNFAIP3-206ENST00000612899 CASTOR2A6NHX0 329 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 SDR42E2A6NKP2 422 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 WNT7AO00755 349 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 GJB6O95452 261 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 CYP3A4P08684 503 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 ACAT1P24752 427 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 VCPP55072 806 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 SFSWAPQ12872 951 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 CYTH1Q15438 398 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 CCDC60Q8IWA6 550 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 DNAJB3Q8WWF6 145 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 CMTM5Q96DZ9 223 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 PAFAH2Q99487 392 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 LRRC4BQ9NT99 713 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 PCDHB7Q9Y5E2 793 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 PPP2R3BQ9Y5P8 575 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 CXCL11O14625 94 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 EPHB6O15197 1021 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 PTK6Q13882 451 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 CNGA3Q16281 694 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 IL17AQ16552 155 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 FKBP1CQ5VVH2 108 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 TDRD10Q5VZ19 366 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 LINC00523Q86TU6 105 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 NT5DC3Q86UY8 548 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 PURBQ96QR8 312 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 ACKR2O00590 384 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 STX7O15400 261 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 TARSP26639 723 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 SREBF2Q12772 1141 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 GRIK4Q16099 956 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 DNAJC19Q96DA6 116 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 OLFM3Q96PB7 478 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 BARX2Q9UMQ3 279 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 ADGRA2Q96PE1 1338 aa12.95□□□□□ -0.34
TNFAIP3-206ENST00000612899 PDHXO00330 501 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 SEC24DO94855 1032 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 FAM153BP0C7A2 387 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 RARAP10276 462 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 MAP4P27816 1152 aaKnown RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 ATICP31939 592 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 PTPN7P35236 360 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 DLG4P78352 724 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 ARHGEF7Q14155 803 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 FAM153CQ494X1 144 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZPBP2Q6X784 338 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 BRSK2Q8IWQ3 736 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 ATP6V0D2Q8N8Y2 350 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 FBXO32Q969P5 355 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 PPP1R2P1Q96PQ5 205 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 UBP1Q9NZI7 540 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 HEY2Q9UBP5 337 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 FAM153AQ9UHL3 310 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 PSMD10O75832 226 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 RHOBTB1O94844 696 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 SLC2A3P11169 496 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 PTPRAP18433 802 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 TKTL1P51854 596 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 CSE1LP55060 971 aaKnown RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 ABCE1P61221 599 aaKnown RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 TRIP10Q15642 601 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 MFSD7Q6UXD7 560 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 VSIG10LQ86VR7 867 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 CREG2Q8IUH2 290 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 FAM136AQ96C01 138 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 APOL5Q9BWW9 433 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 CEP41Q9BYV8 373 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 FRMD8P1Q9BZ68 369 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 CHST12Q9NRB3 414 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 CDYLQ9Y232 598 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 OAZ1P54368 228 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 KCNMA1Q12791 1236 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 FAM83EQ2M2I3 478 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 SGO1Q5FBB7 561 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 DENND1BQ6P3S1 775 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 BTNL9Q6UXG8 535 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 LRRC55Q6ZSA7 311 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 PACS2Q86VP3 889 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZSWIM2Q8NEG5 633 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 IL1RL2Q9HB29 575 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 GLRBP48167 497 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 RGS4P49798 205 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 C15orf52Q6ZUT6 534 aaKnown RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 NLRP9Q7RTR0 991 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 NSL1Q96IY1 281 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 STX18Q9P2W9 335 aaKnown RBP12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZNF212Q9UDV6 495 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 ZNF711Q9Y462 761 aa12.94□□□□□ -0.34
TNFAIP3-206ENST00000612899 SUPT7LO94864 414 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 ENDOD1O94919 500 aa12.93□□□□□ -0.34
TNFAIP3-206ENST00000612899 PAX7P23759 505 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms