RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 TWNKQ96RR1 684 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 METTL14Q9HCE5 456 aaKnown RBP19.28■□□□□ 0.68
VCX3A-203ENST00000612369 PNPLA8Q9NP80 782 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.28■□□□□ 0.68
VCX3A-203ENST00000612369 FAM49BQ9NUQ9 324 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 ARMCX3Q9UH62 379 aaPredicted RBP19.28■□□□□ 0.68
VCX3A-203ENST00000612369 CHORDC1Q9UHD1 332 aaPredicted RBP19.28■□□□□ 0.68
VCX3A-203ENST00000612369 COQ4Q9Y3A0 265 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 CPQQ9Y646 472 aa19.28■□□□□ 0.68
VCX3A-203ENST00000612369 ATG13O75143 517 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 BEST1O76090 585 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 MBL2P11226 248 aaPredicted RBP19.27■□□□□ 0.68
VCX3A-203ENST00000612369 CD58P19256 250 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 GALK1P51570 392 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 PMS1P54277 932 aaKnown RBP19.27■□□□□ 0.68
VCX3A-203ENST00000612369 ZXDBP98169 803 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 FBXO43Q4G163 708 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 TCERG1LQ5VWI1 586 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 FSTL4Q6MZW2 842 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 Q6ZS52 159 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 WHAMMQ8TF30 809 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 RUBCNQ92622 972 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 SEMA4DQ92854 862 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 P2RY13Q9BPV8 354 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 EPC1Q9H2F5 836 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 LINC00597Q9H2U6 94 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 MAN1B1Q9UKM7 699 aa19.27■□□□□ 0.68
VCX3A-203ENST00000612369 CFAP54Q96N23 3096 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 ADORA2BP29275 332 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 HOXA6P31267 233 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 DCAF17Q5H9S7 520 aaPredicted RBP19.26■□□□□ 0.67
VCX3A-203ENST00000612369 CLEC20AQ6ZU45 233 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 FILIP1Q7Z7B0 1213 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 CCDC26Q8TAB7 109 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 CD101Q93033 1021 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 CEP63Q96MT8 703 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 TLR8Q9NR97 1041 aaKnown RBP19.26■□□□□ 0.67
VCX3A-203ENST00000612369 TBC1D14Q9P2M4 693 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 MYH10P35580 1976 aa19.26■□□□□ 0.67
VCX3A-203ENST00000612369 TRIM49BA6NDI0 452 aa19.25■□□□□ 0.67
VCX3A-203ENST00000612369 CHURC1-FNTBB4DL54 471 aa19.25■□□□□ 0.67
VCX3A-203ENST00000612369 CNR2P34972 360 aa19.25■□□□□ 0.67
VCX3A-203ENST00000612369 ADGRG2Q8IZP9 1017 aa19.25■□□□□ 0.67
VCX3A-203ENST00000612369 DUSP9Q99956 384 aaKnown RBP19.25■□□□□ 0.67
VCX3A-203ENST00000612369 CISHQ9NSE2 258 aa19.25■□□□□ 0.67
VCX3A-203ENST00000612369 SMPD4Q9NXE4 827 aa19.25■□□□□ 0.67
VCX3A-203ENST00000612369 GMIPQ9P107 970 aa19.25■□□□□ 0.67
VCX3A-203ENST00000612369 GVINP1Q7Z2Y8 2422 aa19.25■□□□□ 0.67
VCX3A-203ENST00000612369 EP300Q09472 2414 aaPredicted RBP19.24■□□□□ 0.67
VCX3A-203ENST00000612369 E2F8A0AVK6 867 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 BICDL2A1A5D9 508 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 K7ESF4 209 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 COCHO43405 550 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 GADD45BO75293 160 aaPredicted RBP19.24■□□□□ 0.67
VCX3A-203ENST00000612369 MORC3Q14149 939 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 CBWD6Q4V339 395 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 CBWD3Q5JTY5 395 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 CBWD5Q5RIA9 395 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 ISM2Q6H9L7 571 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 SLC35C1Q96A29 364 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 OTUB2Q96DC9 234 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 DUSP16Q9BY84 665 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 FBRSL1Q9HCM7 1045 aaKnown RBP19.24■□□□□ 0.67
VCX3A-203ENST00000612369 CFAP97Q9P2B7 532 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 SCML2Q9UQR0 700 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 WDR87Q6ZQQ6 2873 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 ZNF292O60281 2723 aa19.24■□□□□ 0.67
VCX3A-203ENST00000612369 OTOGLQ3ZCN5 2332 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 HHLA1C9JL84 531 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 PMM2O15305 246 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 EGFP01133 1207 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 CD44P16070 742 aaKnown RBP19.23■□□□□ 0.67
VCX3A-203ENST00000612369 YWHAEP62258 255 aaKnown RBP19.23■□□□□ 0.67
VCX3A-203ENST00000612369 PPP1R26Q5T8A7 1209 aaPredicted RBP19.23■□□□□ 0.67
VCX3A-203ENST00000612369 LONP2Q86WA8 852 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 SECISBP2LQ93073 1101 aaKnown RBP19.23■□□□□ 0.67
VCX3A-203ENST00000612369 TATDN2Q93075 761 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 TMEM176AQ96HP8 235 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 ZFRQ96KR1 1074 aaKnown RBP19.23■□□□□ 0.67
VCX3A-203ENST00000612369 HEXIM2Q96MH2 286 aaKnown RBP19.23■□□□□ 0.67
VCX3A-203ENST00000612369 UBXN6Q9BZV1 441 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 NACA2Q9H009 215 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 CCSER2Q9H7U1 834 aa19.23■□□□□ 0.67
VCX3A-203ENST00000612369 CCDC163A0A0D9SF12 145 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 PPP1R3GB7ZBB8 358 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 TLR5O60602 858 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 RNF40O75150 1001 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 ACO1P21399 889 aaKnown RBP19.22■□□□□ 0.67
VCX3A-203ENST00000612369 PSEN1P49768 467 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 ZNF394Q53GI3 561 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 TTI2Q6NXR4 508 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 SLC4A11Q8NBS3 891 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 HINFPQ9BQA5 517 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 CYLDQ9NQC7 956 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 CHMP5Q9NZZ3 219 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 SMG5Q9UPR3 1016 aaKnown RBP19.22■□□□□ 0.67
VCX3A-203ENST00000612369 SH3BP1Q9Y3L3 701 aa19.22■□□□□ 0.67
VCX3A-203ENST00000612369 P4HA2O15460 535 aa19.21■□□□□ 0.67
VCX3A-203ENST00000612369 ADH1CP00326 375 aa19.21■□□□□ 0.67
VCX3A-203ENST00000612369 CYP17A1P05093 508 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms