RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 RPP25Q9BUL9 199 aaKnown RBP20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 LRRC4Q9HBW1 653 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 GMIPQ9P107 970 aa20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 CHORDC1Q9UHD1 332 aaPredicted RBP20.73■□□□□ 0.91
SHKBP1-214ENST00000597396 FAM92AA1XBS5 289 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 C2orf78A6NCI8 922 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 F8VZ95 297 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 TULP2O00295 520 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 EPHB6O15197 1021 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 CKMP06732 381 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 FCARP24071 287 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 CLCN1P35523 988 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 VIPR2P41587 438 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 PLA2G4AP47712 749 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 PDE6CP51160 858 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 UBASH3AP57075 661 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 PKDCCQ504Y2 493 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 SLC44A3Q8N4M1 653 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 TRPV4Q9HBA0 871 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 TLR8Q9NR97 1041 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 SCML2Q9UQR0 700 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 NCANO14594 1321 aa20.72■□□□□ 0.91
SHKBP1-214ENST00000597396 USP17L7P0C7H9 530 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 PFKLP17858 780 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 HDCP19113 662 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 WEE1P30291 646 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 RGS7P49802 495 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 TKTL1P51854 596 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 CACNA2D4Q7Z3S7 1137 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 SLC47A2Q86VL8 602 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 UBALD2Q8IYN6 164 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 ARL14EPQ8N8R7 260 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 PLA2G2FQ9BZM2 168 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 SMG9Q9H0W8 520 aaKnown RBP20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 DUSP12Q9UNI6 340 aa20.71■□□□□ 0.91
SHKBP1-214ENST00000597396 A0A1W2PQC6 194 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 HEPACAM2A8MVW5 462 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 PRAMEF12O95522 483 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 KRT9P35527 623 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 STAT1P42224 750 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 ZXDAP98168 799 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 ADIGQ0VDE8 80 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 NR1I3Q14994 352 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 MEA1Q16626 185 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 RAB41Q5JT25 222 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 DENND1BQ6P3S1 775 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 CCDC186Q7Z3E2 898 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 SIX6OS1Q8N1H7 587 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 CELF5Q8N6W0 485 aaKnown RBP20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 DEPDC1BQ8WUY9 529 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 SLC35F5Q8WV83 523 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 CYP2S1Q96SQ9 504 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 PDCL3Q9H2J4 239 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 SMOC2Q9H3U7 446 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 USP3Q9Y6I4 520 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 TICRRQ7Z2Z1 1910 aa20.7■□□□□ 0.9
SHKBP1-214ENST00000597396 KIF26AQ9ULI4 1882 aaPredicted RBP20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 NARSO43776 548 aaKnown RBP20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 GFPT2O94808 682 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 SRFP11831 508 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 LCP1P13796 627 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 SOX5P35711 763 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 JAM2P57087 298 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 GRM2Q14416 872 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 HECTD3Q5T447 861 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 PMF1Q6P1K2 205 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 VITQ6UXI7 678 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 YAF2Q8IY57 180 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 KCTD13Q8WZ19 329 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 SLC22A12Q96S37 553 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 ULBP1Q9BZM6 244 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 KIF9Q9HAQ2 790 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 ST7Q9NRC1 585 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 TDP1Q9NUW8 608 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 OBP2AQ9NY56 170 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 IFNKQ9P0W0 207 aa20.69■□□□□ 0.9
SHKBP1-214ENST00000597396 A0A1W2PQH9 124 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 ZBED1O96006 694 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 OAS1P00973 400 aaKnown RBP20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 CFHP08603 1231 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 ZDHHC11BP0C7U3 371 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 CYP11B1P15538 503 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 PSMC3P17980 439 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 HOXD11P31277 338 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 GPD2P43304 727 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 PSEN1P49768 467 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 ZNF268Q14587 947 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 SNX30Q5VWJ9 437 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 PASD1Q8IV76 773 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 MFSD6LQ8IWD5 586 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 TTC16Q8NEE8 873 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 EDAQ92838 391 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 USP13Q92995 863 aaPredicted RBP20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 RSPRY1Q96DX4 576 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 HSFY1Q96LI6 401 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 TRMT61BQ9BVS5 477 aaKnown RBP20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 NACA2Q9H009 215 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 NAGPAQ9UK23 515 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 PCDHGC3Q9UN70 934 aa20.68■□□□□ 0.9
SHKBP1-214ENST00000597396 CEP83Q9Y592 693 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms