RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 FAM49BQ9NUQ9 324 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 CHMP5Q9NZZ3 219 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 F5P12259 2224 aa11.14□□□□□ -0.63
CCDC9-203ENST00000596938 TCHHQ07283 1943 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 HHLA1C9JL84 531 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 SLC9A3R1O14745 358 aaPredicted RBP11.13□□□□□ -0.63
CCDC9-203ENST00000596938 FAM200BP0CF97 657 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 CD58P19256 250 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 DRD1P21728 446 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 HOXA6P31267 233 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 GALK1P51570 392 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 UBE2HP62256 183 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 DCAF17Q5H9S7 520 aaPredicted RBP11.13□□□□□ -0.63
CCDC9-203ENST00000596938 TCERG1LQ5VWI1 586 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 TTI2Q6NXR4 508 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 TSSK4Q6SA08 328 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 CLEC20AQ6ZU45 233 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 DDX42Q86XP3 938 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC9-203ENST00000596938 SUMF1Q8NBK3 374 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 TATDN2Q93075 761 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 SLC35C1Q96A29 364 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 HEXIM2Q96MH2 286 aaKnown RBP11.13□□□□□ -0.63
CCDC9-203ENST00000596938 DUSP9Q99956 384 aaKnown RBP11.13□□□□□ -0.63
CCDC9-203ENST00000596938 UBXN6Q9BZV1 441 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 FBRSL1Q9HCM7 1045 aaKnown RBP11.13□□□□□ -0.63
CCDC9-203ENST00000596938 CISHQ9NSE2 258 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 SCML2Q9UQR0 700 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 CPQQ9Y646 472 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 WNT6Q9Y6F9 365 aa11.13□□□□□ -0.63
CCDC9-203ENST00000596938 E2F8A0AVK6 867 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 BICDL2A1A5D9 508 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 COCHO43405 550 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 ATG13O75143 517 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 NFATC1O95644 943 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 ADORA2BP29275 332 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 RAD23BP54727 409 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 SATB1Q01826 763 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 IFRD2Q12894 506 aaPredicted RBP11.12□□□□□ -0.63
CCDC9-203ENST00000596938 FBXO43Q4G163 708 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 PPP1R26Q5T8A7 1209 aaPredicted RBP11.12□□□□□ -0.63
CCDC9-203ENST00000596938 FSTL4Q6MZW2 842 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 Q6ZS52 159 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 TRIML1Q8N9V2 468 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 SLC4A11Q8NBS3 891 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 NELFBQ8WX92 580 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 TMEM176AQ96HP8 235 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 P2RY13Q9BPV8 354 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 DUSP16Q9BY84 665 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 TLR8Q9NR97 1041 aaKnown RBP11.12□□□□□ -0.63
CCDC9-203ENST00000596938 SMPD4Q9NXE4 827 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 GMIPQ9P107 970 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 TBC1D14Q9P2M4 693 aa11.12□□□□□ -0.63
CCDC9-203ENST00000596938 CHURC1-FNTBB4DL54 471 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 K7ESF4 209 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 P4HA2O15460 535 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 GNA14O95837 355 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 MBL2P11226 248 aaPredicted RBP11.11□□□□□ -0.63
CCDC9-203ENST00000596938 FMO5P49326 533 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 KIF11P52732 1056 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 MARSP56192 900 aaKnown RBP11.11□□□□□ -0.63
CCDC9-203ENST00000596938 CUL2Q13617 745 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 ZNF394Q53GI3 561 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 ARHGAP17Q68EM7 881 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 KLHL10Q6JEL2 608 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 ZNF276Q8N554 614 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 CCDC26Q8TAB7 109 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 CD101Q93033 1021 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 OTUB2Q96DC9 234 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 ZFRQ96KR1 1074 aaKnown RBP11.11□□□□□ -0.63
CCDC9-203ENST00000596938 ARID3AQ99856 593 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 EPC1Q9H2F5 836 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 CCSER2Q9H7U1 834 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 CYLDQ9NQC7 956 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 CFAP97Q9P2B7 532 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 KIAA1257Q9ULG3 409 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 USP3Q9Y6I4 520 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 COL4A2P08572 1712 aa11.11□□□□□ -0.63
CCDC9-203ENST00000596938 BIN1O00499 593 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 TLR5O60602 858 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 EGFP01133 1207 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 ACO1P21399 889 aaKnown RBP11.1□□□□□ -0.63
CCDC9-203ENST00000596938 TBXAS1P24557 533 aaPredicted RBP11.1□□□□□ -0.63
CCDC9-203ENST00000596938 CNR2P34972 360 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 PGFP49763 221 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 PSEN1P49768 467 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 YWHAEP62258 255 aaKnown RBP11.1□□□□□ -0.63
CCDC9-203ENST00000596938 CETN1Q12798 172 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 DHCR24Q15392 516 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 CCDC40Q4G0X9 1142 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 KLHDC10Q6PID8 442 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 RHBDF2Q6PJF5 856 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 GPRIN1Q7Z2K8 1008 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 CCDC186Q7Z3E2 898 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 ANKRD52Q8NB46 1076 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 RUBCNQ92622 972 aa11.1□□□□□ -0.63
CCDC9-203ENST00000596938 CACNA1IQ9P0X4 2223 aa11.09□□□□□ -0.63
CCDC9-203ENST00000596938 RIF1Q5UIP0 2472 aaKnown RBP11.09□□□□□ -0.63
CCDC9-203ENST00000596938 NUP210Q8TEM1 1887 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms