RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 AMPD2Q01433 879 aa22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 PPP2R5DQ14738 602 aa22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 ZNF394Q53GI3 561 aa22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 TATDN2Q93075 761 aa22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 ARID3AQ99856 593 aa22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 ARMCX3Q9UH62 379 aaPredicted RBP22.71■■□□□ 1.23
PPP4R1-228ENST00000584074 FAM92AA1XBS5 289 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 BIN1O00499 593 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 COCHO43405 550 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 MBL2P11226 248 aaPredicted RBP22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 PGFP49763 221 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 GALK1P51570 392 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 GRSF1Q12849 480 aaKnown RBP eCLIP22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 KLHL10Q6JEL2 608 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 CLEC20AQ6ZU45 233 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 GPRIN1Q7Z2K8 1008 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 SYNPOQ8N3V7 929 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 SUMF1Q8NBK3 374 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 JAKMIP2Q96AA8 810 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 FAM126AQ9BYI3 521 aaPredicted RBP22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 CCSER2Q9H7U1 834 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 CISHQ9NSE2 258 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 COMMD8Q9NX08 183 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 CFAP97Q9P2B7 532 aa22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 ZNF638Q14966 1978 aaKnown RBP22.7■■□□□ 1.22
PPP4R1-228ENST00000584074 PPP1R3GB7ZBB8 358 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 EGFP01133 1207 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 ZDHHC11BP0C7U3 371 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 MORC3Q14149 939 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 HECTD3Q5T447 861 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 SNX30Q5VWJ9 437 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 FILIP1Q7Z7B0 1213 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 SLC35C1Q96A29 364 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 FAXDC2Q96IV6 333 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 DUSP9Q99956 384 aaKnown RBP22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 P2RY13Q9BPV8 354 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 COQ4Q9Y3A0 265 aa22.69■■□□□ 1.22
PPP4R1-228ENST00000584074 HHLA1C9JL84 531 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 LILRB5O75023 590 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 NFATC1O95644 943 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 HOXC13P31276 330 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 NRLP54845 237 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 DMWDQ09019 674 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 NR1H3Q13133 447 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 TTI2Q6NXR4 508 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 PKN3Q6P5Z2 889 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 ZFRQ96KR1 1074 aaKnown RBP22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 HEXIM2Q96MH2 286 aaKnown RBP22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 FBXO44Q9H4M3 255 aa22.68■■□□□ 1.22
PPP4R1-228ENST00000584074 K7ESF4 209 aa22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 PPP1R2P41236 205 aa22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 RAD23BP54727 409 aa22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 PPP1R26Q5T8A7 1209 aaPredicted RBP22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 SLC4A11Q8NBS3 891 aa22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 NELFBQ8WX92 580 aa22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 DNAI2Q9GZS0 605 aa22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 CTNND2Q9UQB3 1225 aa22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 ZNF292O60281 2723 aa22.67■■□□□ 1.22
PPP4R1-228ENST00000584074 RIF1Q5UIP0 2472 aaKnown RBP22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 CYP26A1O43174 497 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 PAPSS2O95340 614 aaPredicted RBP22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 ACO1P21399 889 aaKnown RBP22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 DRD1P21728 446 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 TUBP50607 506 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 ADGRG2Q8IZP9 1017 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 TTC39CQ8N584 583 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 KIAA1958Q8N8K9 716 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 EZH1Q92800 747 aaPredicted RBP22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 CD101Q93033 1021 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 TMEM176AQ96HP8 235 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 CEP63Q96MT8 703 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 DUSP16Q9BY84 665 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 METTL14Q9HCE5 456 aaKnown RBP22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 CHMP5Q9NZZ3 219 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 SCML2Q9UQR0 700 aa22.66■■□□□ 1.22
PPP4R1-228ENST00000584074 FANCMQ8IYD8 2048 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 HELZP42694 1942 aaKnown RBP22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 CHURC1-FNTBB4DL54 471 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 RNF40O75150 1001 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 CYP17A1P05093 508 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 FNTBP49356 437 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 LRMPQ12912 555 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 CUL2Q13617 745 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 GAB4Q2WGN9 574 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 CCDC40Q4G0X9 1142 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 HEATR6Q6AI08 1181 aaKnown RBP22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 DDX42Q86XP3 938 aaKnown RBP eCLIP22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 NACA2Q9H009 215 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 EPC1Q9H2F5 836 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 TLR8Q9NR97 1041 aaKnown RBP22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 OSER1Q9NX31 292 aa22.65■■□□□ 1.22
PPP4R1-228ENST00000584074 SLC9A3R1O14745 358 aaPredicted RBP22.64■■□□□ 1.21
PPP4R1-228ENST00000584074 TLR5O60602 858 aa22.64■■□□□ 1.21
PPP4R1-228ENST00000584074 TBX18O95935 607 aa22.64■■□□□ 1.21
PPP4R1-228ENST00000584074 FMO5P49326 533 aa22.64■■□□□ 1.21
PPP4R1-228ENST00000584074 STX17P56962 302 aa22.64■■□□□ 1.21
PPP4R1-228ENST00000584074 UBE2HP62256 183 aa22.64■■□□□ 1.21
PPP4R1-228ENST00000584074 CAMK4Q16566 473 aa22.64■■□□□ 1.21
PPP4R1-228ENST00000584074 DCLK2Q8N568 766 aa22.64■■□□□ 1.21
PPP4R1-228ENST00000584074 RUBCNQ92622 972 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms