RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 GPD1LQ8N335 351 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 GUF1Q8N442 669 aaKnown RBP6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 EFHBQ8N7U6 833 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 CEP112Q8N8E3 955 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 MRPL43Q8N983 215 aaKnown RBP6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 SPERTQ8NA61 448 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 C3orf58Q8NDZ4 430 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 FAM200AQ8TCP9 573 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 EPS8L3Q8TE67 593 aaKnown RBP6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 TMEM174Q8WUU8 243 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 SH3KBP1Q96B97 665 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 ZNF653Q96CK0 615 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 SNF8Q96H20 258 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 FBXL18Q96ME1 805 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 CDCA3Q99618 268 aaPredicted RBP6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 FAM213AQ9BRX8 229 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 COLEC11Q9BWP8 271 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 KCTD10Q9H3F6 313 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 ASB7Q9H672 318 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 GOLGA2P5Q9HBQ8 144 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 KIAA1586Q9HCI6 787 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 CYLDQ9NQC7 956 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 RBAKQ9NYW8 714 aaPredicted RBP6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 HSPBP1Q9NZL4 362 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 ZNF69Q9UC07 566 aa6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 UBQLN1Q9UMX0 589 aaKnown RBP6.43□□□□□ -1.38
PPP4R1-223ENST00000582933 HNRNPCL2B2RXH8 293 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 RASA4BC9J798 803 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 PDXKO00764 312 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CASQ2O14958 399 aaPredicted RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 NDUFB5O43674 189 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 HNRNPCL1O60812 293 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 TBX10O75333 385 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SMNDC1O75940 238 aaKnown RBP eCLIP6.42□□□□□ -1.386e-7■■□□□ 13.7
PPP4R1-223ENST00000582933 FSBPO95073 299 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SLU7O95391 586 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 GLP2RO95838 553 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 MBD3O95983 291 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 NR3C1P04150 777 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 TUBB4AP04350 444 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 POLR2EP19388 210 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CSTF2P33240 577 aaKnown RBP eCLIP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 NRIP1P48552 1158 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CENPAP49450 140 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 AARSP49588 968 aaKnown RBP eCLIP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CYP2J2P51589 502 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CLCNKBP51801 687 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 WNT7BP56706 349 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 DSG1Q02413 1049 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CREMQ03060 361 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SPAG1Q07617 926 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 BNIP1Q12981 228 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SP140Q13342 867 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 LAPTM5Q13571 262 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SNRNP35Q16560 246 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CTC1Q2NKJ3 1217 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 TMEM95Q3KNT9 176 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 USP41Q3LFD5 358 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 PABPC1LQ4VXU2 614 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 WDR44Q5JSH3 913 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 FKBP15Q5T1M5 1219 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 NEPROQ6NW34 567 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 DCLRE1AQ6PJP8 1040 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 INTS8Q75QN2 995 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 TMC7Q7Z402 723 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CBWD2Q8IUF1 395 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SLC9A9Q8IVB4 645 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SMYD4Q8IYR2 804 aaPredicted RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 XXYLT1Q8NBI6 393 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 ZSWIM2Q8NEG5 633 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 BEST2Q8NFU1 509 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 VN1R2Q8NFZ6 395 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SPATA18Q8TC71 538 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 HASPINQ8TF76 798 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 AUTS2Q8WXX7 1259 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 HLA-CQ95604 372 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 PABPC5Q96DU9 382 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 NRBF2Q96F24 287 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 RPGRIP1Q96KN7 1286 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 PSKH2Q96QS6 385 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 GPR62Q9BZJ7 368 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 TRIM8Q9BZR9 551 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 PCIF1Q9H4Z3 704 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 TLE6Q9H808 572 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 UBE2ZQ9H832 354 aaPredicted RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 FANCFQ9NPI8 374 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 MRPL17Q9NRX2 175 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 CHST7Q9NS84 486 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SEPT11Q9NVA2 429 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 COG5Q9UP83 839 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 R3HDM2Q9Y2K5 976 aaKnown RBP6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 SH3GLB1Q9Y371 365 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 MUC3AQ02505 3323 aa6.42□□□□□ -1.38
PPP4R1-223ENST00000582933 PLXNA4Q9HCM2 1894 aa6.41□□□□□ -1.38
PPP4R1-223ENST00000582933 ANO9A1A5B4 782 aa6.41□□□□□ -1.38
PPP4R1-223ENST00000582933 GOLGA8IPA6NC78 632 aa6.41□□□□□ -1.38
PPP4R1-223ENST00000582933 ZNF233A6NK53 670 aa6.41□□□□□ -1.38
PPP4R1-223ENST00000582933 GOLGA8JA6NMD2 632 aa6.41□□□□□ -1.38
PPP4R1-223ENST00000582933 LRRIQ3A6PVS8 624 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms