RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 SREBF1P36956 1147 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 MAP2K6P52564 334 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 ADAM8P78325 824 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 HDAC1Q13547 482 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-214ENST00000572365 TBR1Q16650 682 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 KIAA1755Q5JYT7 1200 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 CCDC174Q6PII3 467 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 KRTAP19-1Q8IUB9 90 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 KIAA0319LQ8IZA0 1049 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 PQLC1Q8N2U9 271 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 NUP133Q8WUM0 1156 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 MRGPRX4Q96LA9 322 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 DMRTA2Q96SC8 542 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 PDCD2LQ9BRP1 358 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 HIPK3Q9H422 1215 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 CHST12Q9NRB3 414 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 TDP1Q9NUW8 608 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 ZDHHC9Q9Y397 364 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 DDX49Q9Y6V7 483 aaKnown RBP6.29□□□□□ -1.4
SF3B3-214ENST00000572365 MROH7-TTC4A0A0A0MT08 1334 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 SYNRGQ9UMZ2 1314 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 EP300Q09472 2414 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-214ENST00000572365 GPR75-ASB3A0A0A6YYF3 556 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-214ENST00000572365 NPIPB6E9PJ23 425 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 NRP1O14786 923 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 ARHGAP6O43182 974 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 ITGA10O75578 1167 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 CSPG5O95196 566 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 FTLP02792 175 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-214ENST00000572365 CYP2C9P11712 490 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 GYPEP15421 78 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 HTR1BP28222 390 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 GUCY1A2P33402 732 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 RAP1GAPP47736 663 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 HK3P52790 923 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 BPIFB4P59827 614 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 PSMC6P62333 389 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 TARDBPQ13148 414 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3B3-214ENST00000572365 SAFBQ15424 915 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3B3-214ENST00000572365 ATP2B3Q16720 1220 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 ANO6Q4KMQ2 910 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 COBLL1Q53SF7 1204 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 PPP4R4Q6NUP7 873 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 NPNTQ6UXI9 565 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 ATG9AQ7Z3C6 839 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 KLHDC9Q8NEP7 349 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 LPIN2Q92539 896 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 GLT1D1Q96MS3 346 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 SAMD11Q96NU1 681 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 B3GNT5Q9BYG0 378 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 SPATC1LQ9H0A9 340 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 GNL3LQ9NVN8 582 aaKnown RBP6.28□□□□□ -1.4
SF3B3-214ENST00000572365 AATFQ9NY61 560 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3B3-214ENST00000572365 RAI14Q9P0K7 980 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 ZHX1Q9UKY1 873 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-214ENST00000572365 L1RE1Q9UN81 338 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 POLHQ9Y253 713 aa6.28□□□□□ -1.4
SF3B3-214ENST00000572365 MAP1BP46821 2468 aaKnown RBP6.27□□□□□ -1.4
SF3B3-214ENST00000572365 KMT2BQ9UMN6 2715 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-214ENST00000572365 NCOR2Q9Y618 2525 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 PMS2P1A4D2B8 440 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 MROH6A6NGR9 719 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 PEX14O75381 377 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 AMY1AP04745 511 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 SLURP1P55000 103 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 VCPP55072 806 aaKnown RBP6.27□□□□□ -1.41
SF3B3-214ENST00000572365 PER3P56645 1201 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 ATP2C1P98194 919 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-214ENST00000572365 ATP8B2P98198 1209 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 DUSP2Q05923 314 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 RAB39AQ14964 217 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 LLGL1Q15334 1064 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 TMEM63BQ5T3F8 832 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 SYCP2LQ5T4T6 812 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 CXCL17Q6UXB2 119 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 KBTBD2Q8IY47 623 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 TRMT2AQ8IZ69 625 aaKnown RBP6.27□□□□□ -1.41
SF3B3-214ENST00000572365 ZDHHC14Q8IZN3 488 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 SPICE1Q8N0Z3 855 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 ANKRD53Q8N9V6 530 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 C3orf20Q8ND61 904 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 FAM156AQ8NDB6 213 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 OR14K1Q8NGZ2 314 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 IFI44Q8TCB0 444 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 CDK5RAP3Q96JB5 506 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 CLPTM1LQ96KA5 538 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 MTIF3Q9H2K0 278 aaKnown RBP6.27□□□□□ -1.41
SF3B3-214ENST00000572365 LANCL2Q9NS86 450 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 CALCOCO1Q9P1Z2 691 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 PI4KBQ9UBF8 816 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 PA2G4Q9UQ80 394 aaKnown RBP6.27□□□□□ -1.41
SF3B3-214ENST00000572365 KMT2EQ8IZD2 1858 aa6.27□□□□□ -1.41
SF3B3-214ENST00000572365 ZNF536O15090 1300 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 GRIN2DO15399 1336 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 CHD8Q9HCK8 2581 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 CHD6Q8TD26 2715 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 A0A088AWK7 358 aa6.26□□□□□ -1.41
SF3B3-214ENST00000572365 A0A0U1RQG5 324 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms