RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 TMEM35BQ8NCS4 154 aa22.83■■□□□ 1.25
SNX1-206ENST00000559389 MRPS31Q92665 395 aaKnown RBP22.83■■□□□ 1.25
SNX1-206ENST00000559389 SLC4A5Q9BY07 1137 aa22.83■■□□□ 1.25
SNX1-206ENST00000559389 ULBP1Q9BZM6 244 aa22.83■■□□□ 1.25
SNX1-206ENST00000559389 CYLDQ9NQC7 956 aa22.83■■□□□ 1.25
SNX1-206ENST00000559389 NR2E1Q9Y466 385 aa22.83■■□□□ 1.25
SNX1-206ENST00000559389 DOCK8Q8NF50 2099 aa22.83■■□□□ 1.24
SNX1-206ENST00000559389 MFAP3LO75121 409 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 SLC34A2O95436 690 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 TPM1P09493 284 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 ZDHHC11BP0C7U3 371 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 SP100P23497 879 aaPredicted RBP22.82■■□□□ 1.24
SNX1-206ENST00000559389 GBP2P32456 591 aaPredicted RBP22.82■■□□□ 1.24
SNX1-206ENST00000559389 ACADSBP45954 432 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 NOMO3P69849 1222 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 ZP2Q05996 745 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 ARHGAP15Q53QZ3 475 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 STXBP5Q5T5C0 1151 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 POTEHQ6S545 545 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 BHLHA9Q7RTU4 235 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 ADHFE1Q8IWW8 467 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 SIX6OS1Q8N1H7 587 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 SCML4Q8N228 414 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 CNGB3Q9NQW8 809 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 GDE1Q9NZC3 331 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 TRPM5Q9NZQ8 1165 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 EPS15L1Q9UBC2 864 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 ZFP37Q9Y6Q3 630 aaPredicted RBP22.82■■□□□ 1.24
SNX1-206ENST00000559389 ANAPC1Q9H1A4 1944 aa22.82■■□□□ 1.24
SNX1-206ENST00000559389 NUP210Q8TEM1 1887 aaPredicted RBP22.81■■□□□ 1.24
SNX1-206ENST00000559389 ZNF840PA6NDX5 716 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 C2CD4DB7Z1M9 353 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 CYP1A1P04798 512 aaPredicted RBP22.81■■□□□ 1.24
SNX1-206ENST00000559389 HNRNPH3P31942 346 aaKnown RBP22.81■■□□□ 1.24
SNX1-206ENST00000559389 KLHL30Q0D2K2 578 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 PTPN20Q4JDL3 420 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 GPR158Q5T848 1215 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 HGSNATQ68CP4 663 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 PM20D1Q6GTS8 502 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 ACSF2Q96CM8 615 aaPredicted RBP22.81■■□□□ 1.24
SNX1-206ENST00000559389 RPGRIP1Q96KN7 1286 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 NOX5Q96PH1 765 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 CPXM1Q96SM3 734 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 DNAJC7Q99615 494 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 AGPAT1Q99943 283 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 TASP1Q9H6P5 420 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 ST7Q9NRC1 585 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 COL6A3P12111 3177 aa22.81■■□□□ 1.24
SNX1-206ENST00000559389 LOC730098B7Z3J9 87 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 E5RJQ4 531 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 ADCY5O95622 1261 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 ZBED1O96006 694 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 USP17L7P0C7H9 530 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 LAMP2P13473 410 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 LCP1P13796 627 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 DDX6P26196 483 aaKnown RBP eCLIP22.8■■□□□ 1.24
SNX1-206ENST00000559389 CDC25BP30305 580 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 TJAP1Q5JTD0 557 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 SNX30Q5VWJ9 437 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 NAA35Q5VZE5 725 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 TMEM110Q86TL2 294 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 PCDHB18PQ96TA0 734 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 HAUS4Q9H6D7 363 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 ABHD10Q9NUJ1 306 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 TJP2Q9UDY2 1190 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 ZMYM5Q9UJ78 669 aa22.8■■□□□ 1.24
SNX1-206ENST00000559389 SOBPA7XYQ1 873 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 PIK3R2O00459 728 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 FBXO21O94952 628 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 PGFP49763 221 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 TUBP50607 506 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 DAOAP59103 153 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 TXNDC8Q6A555 127 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 ZNF571Q7Z3V5 609 aaPredicted RBP22.79■■□□□ 1.24
SNX1-206ENST00000559389 SCD5Q86SK9 330 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 MON1AQ86VX9 555 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 CNGA4Q8IV77 575 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 ZDHHC14Q8IZN3 488 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 IPO4Q8TEX9 1081 aaKnown RBP22.79■■□□□ 1.24
SNX1-206ENST00000559389 MCRS1Q96EZ8 462 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 PPP1R13BQ96KQ4 1090 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 SLITRK6Q9H5Y7 841 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 GRPEL1Q9HAV7 217 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 NMUR1Q9HB89 426 aa22.79■■□□□ 1.24
SNX1-206ENST00000559389 TLR8Q9NR97 1041 aaKnown RBP22.79■■□□□ 1.24
SNX1-206ENST00000559389 PRUNE2Q8WUY3 3088 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 A0A1W2PQH9 124 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 C2orf78A6NCI8 922 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 GOLGA6L3A6NEY3 463 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 OLFM2O95897 454 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 OAS1P00973 400 aaKnown RBP22.78■■□□□ 1.24
SNX1-206ENST00000559389 ERBB2P04626 1255 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 SERPING1P05155 500 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 SKILP12757 684 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 UNGP13051 313 aaPredicted RBP22.78■■□□□ 1.24
SNX1-206ENST00000559389 PFKLP17858 780 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 GOLGA8FQ08AF8 430 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 GOLGA8DPQ0D2H9 430 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 CLEC16AQ2KHT3 1053 aa22.78■■□□□ 1.24
SNX1-206ENST00000559389 TDRD12Q587J7 1177 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms