RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 SERPINE1P05121 402 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF621Q6ZSS3 439 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NGLY1Q96IV0 654 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 WDR64B1ANS9 1081 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TFPTP0C1Z6 253 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 COASYQ13057 564 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TMEM26Q6ZUK4 368 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ATXN7L3BQ96GX2 97 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 OLFM1Q99784 485 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SP140LQ9H930 580 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PMF1-BGLAPU3KQ54 211 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 MYO3BQ8WXR4 1341 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 EFCAB10A6NFE3 127 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 RAB27AP51159 221 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 XIAPP98170 497 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 MAPK7Q13164 816 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SPATA18Q8TC71 538 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 UBXN6Q9BZV1 441 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 LY9Q9HBG7 655 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NINJ2Q9NZG7 142 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 VTI1BQ9UEU0 232 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SERPINB13Q9UIV8 391 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TNPO2O14787 897 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PIGHQ14442 188 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CERKLQ49MI3 558 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF57Q68EA5 555 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 RIPOR1Q6ZS17 1223 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 FAM149B1Q96BN6 582 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ARHGEF10LQ9HCE6 1279 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NKIRAS2Q9NYR9 191 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 BAZ1AQ9NRL2 1556 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PRAMEF22A3QJZ6 481 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PGK2P07205 417 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CNPP09543 421 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF23P17027 643 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SSTR1P30872 391 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CENPAP49450 140 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 RAB15P59190 212 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SLCO6A1Q86UG4 719 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 HTRA1Q92743 480 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 EMC3Q9P0I2 261 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NPC1L1Q9UHC9 1359 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NARS2Q96I59 477 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 LIMD1Q9UGP4 676 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ABCC9O60706 1549 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CCNDBP1O95273 360 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 H6PDO95479 791 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CDK9P50750 372 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TBCELQ5QJ74 424 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 AADACL2Q6P093 401 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 DNAJC1Q96KC8 554 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 FANCEQ9HB96 536 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ERVK-11Q9UQG0 969 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 KATNA1O75449 491 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TMEM253P0C7T8 217 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PTK7Q13308 1070 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ARL13BQ3SXY8 428 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PCNX4Q63HM2 1172 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZNF605Q86T29 641 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZNHIT2Q9UHR6 403 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 VPS4AQ9UN37 437 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 FEN1P39748 380 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ST3GAL1Q11201 340 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 GTF2H3Q13889 308 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CENPPQ6IPU0 288 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PALB2Q86YC2 1186 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 CNKSR1Q969H4 720 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ARHGAP20Q9P2F6 1191 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NDUFS3O75489 264 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PSMB9P28065 219 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SCNN1DP51172 638 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TRAP1Q12931 704 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 DEF8Q6ZN54 512 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 YTHDF1Q9BYJ9 559 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 MAGEC1O60732 1142 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TSPAN19P0C672 248 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 PHKA2P46019 1235 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NCCRP1Q6ZVX7 275 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ELMOD2Q8IZ81 293 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 RNF139Q8WU17 664 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 DEDD2Q8WXF8 326 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ART4Q93070 314 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 KLHL32Q96NJ5 620 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 WDR17Q8IZU2 1322 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 SYNCRIPO60506 623 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ROR1Q01973 937 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 NCOA4Q13772 614 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ZFP69Q49AA0 526 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ARHGAP27Q6ZUM4 889 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 RFFLQ8WZ73 363 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 FAXDC2Q96IV6 333 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ADSLP30566 484 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 ENTPD1P49961 510 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 MMRN1Q13201 1228 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 WDR45BQ5MNZ6 344 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 DHX36Q9H2U1 1008 aaKnown RBP3.81□□□□□ -1.8
ATXN3-248ENST00000558190 HIPK3Q9H422 1215 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 TASP1Q9H6P5 420 aa3.81□□□□□ -1.8
ATXN3-248ENST00000558190 KLHL8Q9P2G9 620 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms