RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 TDO2P48775 406 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 FXR1P51114 621 aaKnown RBP eCLIP5.69□□□□□ -1.5
SCAF11-214ENST00000550893 SLC25A3Q00325 362 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 TFAP4Q01664 338 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 DUSP2Q05923 314 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 ABHD18Q0P651 414 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 MRPL49Q13405 166 aaKnown RBP5.69□□□□□ -1.5
SCAF11-214ENST00000550893 TOB2Q14106 344 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-214ENST00000550893 KIF22Q14807 665 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 UGT8Q16880 541 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 LRRC26Q2I0M4 334 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 PRAMEF19Q5SWL8 479 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 BTNL9Q6UXG8 535 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 ZNF662Q6ZS27 426 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 TICAM2Q86XR7 235 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 CMIPQ8IY22 773 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 AFAP1L2Q8N4X5 818 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 FAM133AQ8N9E0 248 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 GPATCH3Q96I76 525 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 PAWRQ96IZ0 340 aaKnown RBP5.69□□□□□ -1.5
SCAF11-214ENST00000550893 SLF1Q9BQI6 1058 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 TMEM47Q9BQJ4 181 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 LSG1Q9H089 658 aaKnown RBP5.69□□□□□ -1.5
SCAF11-214ENST00000550893 NAPBQ9H115 298 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 EPC1Q9H2F5 836 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 RANBP17Q9H2T7 1088 aaKnown RBP5.69□□□□□ -1.5
SCAF11-214ENST00000550893 MMRN2Q9H8L6 949 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 TCP11L1Q9NUJ3 509 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 CLIP2Q9UDT6 1046 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 EDARQ9UNE0 448 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 LOXHD1Q8IVV2 1947 aa5.69□□□□□ -1.5
SCAF11-214ENST00000550893 CUL9Q8IWT3 2517 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 PLA2G6O60733 806 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 PRAMEF4O60810 478 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 TMEM127O75204 238 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 TTLL1O95922 423 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 ZKSCAN1P17029 563 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-214ENST00000550893 HK1P19367 917 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 ITGB8P26012 769 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 MCM7P33993 719 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 RGS2P41220 211 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 HMGA2P52926 109 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 WNT3AP56704 352 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 CNTN2Q02246 1040 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 FSCN1Q16658 493 aaKnown RBP5.68□□□□□ -1.5
SCAF11-214ENST00000550893 AKNAD1Q5T1N1 836 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 ANO1Q5XXA6 986 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 CWC27Q6UX04 472 aaKnown RBP5.68□□□□□ -1.5
SCAF11-214ENST00000550893 ABHD15Q6UXT9 468 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 ABRAQ8N0Z2 381 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 ENAHQ8N8S7 591 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-214ENST00000550893 ANKS1AQ92625 1134 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 COA7Q96BR5 231 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 CHMP4CQ96CF2 233 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 MTMR8Q96EF0 704 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 IL17RAQ96F46 866 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 GDF15Q99988 308 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 CPPED1Q9BRF8 314 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-214ENST00000550893 RWDD1Q9H446 243 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-214ENST00000550893 RAVER2Q9HCJ3 691 aaKnown RBP5.68□□□□□ -1.5
SCAF11-214ENST00000550893 VTA1Q9NP79 307 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 A1CFQ9NQ94 594 aaKnown RBP5.68□□□□□ -1.5
SCAF11-214ENST00000550893 SLC2A4RGQ9NR83 387 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 COL20A1Q9P218 1284 aa5.68□□□□□ -1.5
SCAF11-214ENST00000550893 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 GOLGA6L6A8MZA4 724 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 CYTH3O43739 400 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 BRINP1O60477 761 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 FAM20BO75063 409 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 EYA4O95677 639 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 ENPP1P22413 925 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 MCCP23508 829 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 HOXD10P28358 340 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 SLC16A2P36021 539 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 ZNF543Q08ER8 600 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 FHL2Q14192 279 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 STAT4Q14765 748 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.67□□□□□ -1.53e-7■■■□□ 18.5
SCAF11-214ENST00000550893 DCAF17Q5H9S7 520 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 CT47A1Q5JQC4 288 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 SNRNP48Q6IEG0 339 aaKnown RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 SLC30A10Q6XR72 485 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 MB21D2Q8IYB1 491 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 MORC4Q8TE76 937 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 ZNF483Q8TF39 744 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 SNX33Q8WV41 574 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 TBC1D5Q92609 795 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 ACAP3Q96P50 834 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 LSM14BQ9BX40 385 aaKnown RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 TEX13BQ9BXU2 312 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 DDX20Q9UHI6 824 aaKnown RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 DPP7Q9UHL4 492 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 REXO2Q9Y3B8 237 aaKnown RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 GRIN2DO15399 1336 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 FRMPD2Q68DX3 1309 aaPredicted RBP5.67□□□□□ -1.5
SCAF11-214ENST00000550893 RAD50Q92878 1312 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 SYNRGQ9UMZ2 1314 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 MICAL3Q7RTP6 2002 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 KIAA1671Q9BY89 1806 aa5.67□□□□□ -1.5
SCAF11-214ENST00000550893 GRXCR1A8MXD5 290 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms