RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 WDR24Q96S15 920 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 FAM167BQ9BTA0 163 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 INO80BQ9C086 356 aaPredicted RBP7.37□□□□□ -1.23
LEMD3-206ENST00000545026 PABPC3Q9H361 631 aaKnown RBP7.37□□□□□ -1.23
LEMD3-206ENST00000545026 C9orf78Q9NZ63 289 aaPredicted RBP7.37□□□□□ -1.23
LEMD3-206ENST00000545026 SRP68Q9UHB9 627 aaKnown RBP7.37□□□□□ -1.23
LEMD3-206ENST00000545026 RIMKLBQ9ULI2 386 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 FZD1Q9UP38 647 aa7.37□□□□□ -1.23
LEMD3-206ENST00000545026 CENPVL1A0A0U1RR11 272 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 J3KTA2 159 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 SNX2O60749 519 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 ACTL6BO94805 426 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 RBL1P28749 1068 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 MAGEA10P43363 369 aaPredicted RBP7.36□□□□□ -1.23
LEMD3-206ENST00000545026 ALDH18A1P54886 795 aaKnown RBP7.36□□□□□ -1.23
LEMD3-206ENST00000545026 TIRAPP58753 221 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 SF3B3Q15393 1217 aaKnown RBP7.36□□□□□ -1.23
LEMD3-206ENST00000545026 TIGD2Q4W5G0 525 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 ALFQ53S48 1182 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 KLHL17Q6TDP4 642 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 RNF207Q6ZRF8 634 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 ARHGEF19Q8IW93 802 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 LNX2Q8N448 690 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 B3GALNT2Q8NCR0 500 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 SUN3Q8TAQ9 357 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 MYCBPAPQ8TBZ2 947 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 RSC1A1Q92681 617 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 DDX23Q9BUQ8 820 aaKnown RBP7.36□□□□□ -1.23
LEMD3-206ENST00000545026 VN1R3Q9BXE9 311 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 C1QTNF3Q9BXJ4 246 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 ZCWPW1Q9H0M4 648 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 FSCN3Q9NQT6 498 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 PRDM8Q9NQV8 689 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 SLC27A6Q9Y2P4 619 aa7.36□□□□□ -1.23
LEMD3-206ENST00000545026 ZSCAN9O15535 394 aaPredicted RBP7.35□□□□□ -1.23
LEMD3-206ENST00000545026 IRAK2O43187 625 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 PROM1O43490 865 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 CBFA2T3O75081 653 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 VNN1O95497 513 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 PEX11BO96011 259 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 C1SP09871 688 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 ZNF20P17024 532 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 KLRK1P26718 216 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 CTSWP56202 376 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 ITIH3Q06033 890 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 GRM4Q14833 912 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 NRN1LQ496H8 165 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 VWA1Q6PCB0 445 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 CLEC9AQ6UXN8 241 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 RHOUQ7L0Q8 258 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 MAVSQ7Z434 540 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 MOGAT3Q86VF5 341 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 SLC44A2Q8IWA5 706 aaPredicted RBP7.35□□□□□ -1.23
LEMD3-206ENST00000545026 SCAMP5Q8TAC9 235 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 GLG1Q92896 1179 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 HAPLN3Q96S86 360 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 GPR20Q99678 358 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 NUDT22Q9BRQ3 303 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 RTKNQ9BST9 563 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 TBCCD1Q9NVR7 557 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 PGAP2Q9UHJ9 254 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 USP22Q9UPT9 525 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 DRG1Q9Y295 367 aaKnown RBP7.35□□□□□ -1.23
LEMD3-206ENST00000545026 TSC22D4Q9Y3Q8 395 aa7.35□□□□□ -1.23
LEMD3-206ENST00000545026 FER1L4A9Z1Z3 1794 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 SH3BP5O60239 455 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 FOXD2O60548 495 aaPredicted RBP7.34□□□□□ -1.23
LEMD3-206ENST00000545026 FAM155BO75949 473 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 RHOP08100 348 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 CST5P28325 142 aaPredicted RBP7.34□□□□□ -1.23
LEMD3-206ENST00000545026 MAPK9P45984 424 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 NXPH1P58417 271 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 AP2B1P63010 937 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 EIF2B5Q13144 721 aaKnown RBP7.34□□□□□ -1.23
LEMD3-206ENST00000545026 CLCA4Q14CN2 919 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 LVRNQ6Q4G3 990 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 CCDC117Q8IWD4 279 aaPredicted RBP7.34□□□□□ -1.23
LEMD3-206ENST00000545026 NRSN1Q8IZ57 195 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 METTL25Q8N6Q8 603 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 CACTINQ8WUQ7 758 aaKnown RBP7.34□□□□□ -1.23
LEMD3-206ENST00000545026 SOCS4Q8WXH5 440 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 ASB10Q8WXI3 467 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 LENG9Q96B70 501 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 UBXN10Q96LJ8 280 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 GLOD4Q9HC38 313 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 RRN3Q9NYV6 651 aa7.34□□□□□ -1.23
LEMD3-206ENST00000545026 ADGRA2Q96PE1 1338 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 A1L4Q6 167 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 SLC16A3O15427 465 aaKnown RBP7.33□□□□□ -1.24
LEMD3-206ENST00000545026 TAF5LO75529 589 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 EGR2P11161 476 aaPredicted RBP7.33□□□□□ -1.24
LEMD3-206ENST00000545026 ACOX1Q15067 660 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 TRIM60Q495X7 471 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 C11orf44Q8N8P7 122 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 SPPL3Q8TCT6 385 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 PNISRQ8TF01 805 aaKnown RBP7.33□□□□□ -1.24
LEMD3-206ENST00000545026 RUBCNQ92622 972 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 FKBP10Q96AY3 582 aa7.33□□□□□ -1.24
LEMD3-206ENST00000545026 ZSCAN31Q96LW9 406 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms