RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CCL15-CCL14A0A0B4J2E2 113 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 H7C0C1 242 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 APOC4-APOC2K7ER74 178 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 TYROBPO43914 113 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 APOC2P02655 101 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 NQO1P15559 274 aaKnown RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 GPD1P21695 349 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 ELK3P41970 407 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 ATP5OP48047 213 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 SPARCL1Q14515 664 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 GRIK4Q16099 956 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 CCL15Q16663 113 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 GOLGA7BQ2TAP0 167 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 EFHC2Q5JST6 749 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 GLRA4Q5JXX5 417 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 PPP1R26Q5T8A7 1209 aaPredicted RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 HHATQ5VTY9 493 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 ACOT1Q86TX2 421 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 TDRPQ86YL5 185 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 AGGF1Q8N302 714 aaeCLIP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 KLHL29Q96CT2 875 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 MRPL45Q9BRJ2 306 aaKnown RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 MIS12Q9H081 205 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 MYLK2Q9H1R3 596 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 ASB7Q9H672 318 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 SLC24A3Q9HC58 644 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 NGRNQ9NPE2 291 aaKnown RBP12.03□□□□□ -0.48
C11orf54-214ENST00000540113 MORF4L1Q9UBU8 362 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 NME7Q9Y5B8 376 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 RALGAPA2Q2PPJ7 1873 aa12.03□□□□□ -0.48
C11orf54-214ENST00000540113 MCF2LO15068 1137 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 FAM155BO75949 473 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 VDRP11473 427 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 ATICP31939 592 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 ATXN1P54253 815 aaKnown RBP12.02□□□□□ -0.48
C11orf54-214ENST00000540113 GSCP56915 257 aaPredicted RBP12.02□□□□□ -0.48
C11orf54-214ENST00000540113 OVGP1Q12889 678 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 TAZQ16635 292 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 PMF1Q6P1K2 205 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 CEP128Q6ZU80 1094 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.48
C11orf54-214ENST00000540113 PLCD3Q8N3E9 789 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 FNIP1Q8TF40 1166 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 TMEM237Q96Q45 408 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 TRIM56Q9BRZ2 755 aaKnown RBP12.02□□□□□ -0.48
C11orf54-214ENST00000540113 RXFP1Q9HBX9 757 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 ASNSD1Q9NWL6 643 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 WDR35Q9P2L0 1181 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 NR2E3Q9Y5X4 410 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 SCN1AP35498 2009 aa12.02□□□□□ -0.48
C11orf54-214ENST00000540113 C2CD4BA6NLJ0 364 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 F5H423 210 aaPredicted RBP12.02□□□□□ -0.49
C11orf54-214ENST00000540113 PRPF4O43172 522 aaKnown RBP eCLIP12.02□□□□□ -0.49
C11orf54-214ENST00000540113 HMGCRP04035 888 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 MMP3P08254 477 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 HOXD8P13378 290 aaPredicted RBP12.02□□□□□ -0.49
C11orf54-214ENST00000540113 RDXP35241 583 aaKnown RBP12.02□□□□□ -0.49
C11orf54-214ENST00000540113 GABRB2P47870 512 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 ZNF143P52747 638 aaPredicted RBP12.02□□□□□ -0.49
C11orf54-214ENST00000540113 ROR1Q01973 937 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 KIZQ2M2Z5 673 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 CCDC14Q49A88 953 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 SWT1Q5T5J6 900 aaKnown RBP12.02□□□□□ -0.49
C11orf54-214ENST00000540113 PCGF5Q86SE9 256 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 ATP11CQ8NB49 1132 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 TTC13Q8NBP0 860 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 NETO2Q8NC67 525 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 LRRC8CQ8TDW0 803 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 CLEC4CQ8WTT0 213 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 CFAP36Q96G28 342 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 FAXDC2Q96IV6 333 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 ACAP3Q96P50 834 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 CYP3A43Q9HB55 503 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 ZMYND8Q9ULU4 1186 aaPredicted RBP12.02□□□□□ -0.49
C11orf54-214ENST00000540113 BARX2Q9UMQ3 279 aaPredicted RBP12.02□□□□□ -0.49
C11orf54-214ENST00000540113 SNX9Q9Y5X1 595 aa12.02□□□□□ -0.49
C11orf54-214ENST00000540113 A0A1B0GUA9 196 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 KBTBD13C9JR72 458 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 KCNN4O15554 427 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 GABBR2O75899 941 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 NPTXRO95502 500 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 YWHAGP61981 247 aaKnown RBP eCLIP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 INCA1Q0VD86 236 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 NR1H3Q13133 447 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 GRB14Q14449 540 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 KRT81Q14533 505 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 PPP6R3Q5H9R7 873 aaPredicted RBP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 GPR142Q7Z601 462 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 PRPF39Q86UA1 669 aaKnown RBP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 PDIK1LQ8N165 341 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 TCP10LQ8TDR4 215 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 DCAKDQ8WVC6 231 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 C18orf25Q96B23 403 aaPredicted RBP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 ERP27Q96DN0 273 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 ZMAT2Q96NC0 199 aaKnown RBP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 APOL6Q9BWW8 343 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 SLC24A2Q9UI40 661 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms