RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 ZNF528Q3MIS6 628 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 ARHGAP17Q68EM7 881 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 MLKLQ8NB16 471 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 CHFRQ96EP1 664 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 MED15Q96RN5 788 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 SRRTQ9BXP5 876 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 DUSP16Q9BY84 665 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 EBF3Q9H4W6 596 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 LMBRD1Q9NUN5 540 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 FAM86C1Q9NVL1 165 aa18.19■□□□□ 0.5
SFSWAP-205ENST00000537164 FGFR1OPO95684 399 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 YWHAEP62258 255 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 IFRD2Q12894 506 aaPredicted RBP18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 CCINQ13939 588 aa18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 EML3Q32P44 896 aa18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 ZNF394Q53GI3 561 aa18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 TRIM68Q6AZZ1 485 aa18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 UBXN6Q9BZV1 441 aa18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 LMAN1LQ9HAT1 526 aa18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 DUS2Q9NX74 493 aaKnown RBP18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 CHORDC1Q9UHD1 332 aaPredicted RBP18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 SCML2Q9UQR0 700 aa18.18■□□□□ 0.5
SFSWAP-205ENST00000537164 LEFTY2O00292 366 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 TRDMT1O14717 391 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 LAMTOR5O43504 91 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 SP9P0CG40 484 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 CCDC192P0DO97 292 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 ARSAP15289 507 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 KIF11P52732 1056 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 CETN1Q12798 172 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 KCNH2Q12809 1159 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 DGKKQ5KSL6 1271 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 HECTD3Q5T447 861 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 GPRIN1Q7Z2K8 1008 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 ALYREFQ86V81 257 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 DDX42Q86XP3 938 aaKnown RBP eCLIP18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 SYNPOQ8N3V7 929 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 TTC8Q8TAM2 541 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 NELL1Q92832 810 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 ATP2A3Q93084 1043 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 ZFRQ96KR1 1074 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 HEXIM2Q96MH2 286 aaKnown RBP18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 ECT2Q9H8V3 914 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 PRMT8Q9NR22 394 aaPredicted RBP18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 SPATA6Q9NWH7 488 aaPredicted RBP18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 CPQQ9Y646 472 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 USP3Q9Y6I4 520 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 CFAP54Q96N23 3096 aa18.17■□□□□ 0.5
SFSWAP-205ENST00000537164 COCHO43405 550 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 ABL1P00519 1130 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 AMPD2Q01433 879 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 MTAPQ13126 283 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 LRRC32Q14392 662 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 TMEM196Q5HYL7 178 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 CPA6Q8N4T0 437 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 ZNF276Q8N554 614 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 ANKRD52Q8NB46 1076 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 NT5C1BQ96P26 610 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 CYLDQ9NQC7 956 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 TLR8Q9NR97 1041 aaKnown RBP18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 GMIPQ9P107 970 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 KIAA1257Q9ULG3 409 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 WNT6Q9Y6F9 365 aa18.16■□□□□ 0.5
SFSWAP-205ENST00000537164 RIF1Q5UIP0 2472 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 AFPP02771 609 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 ACO1P21399 889 aaKnown RBP18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 GJA4P35212 333 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 IFNAR2P48551 515 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 PGFP49763 221 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 GCNT1Q02742 428 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 GAS6Q14393 721 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 PON2Q15165 354 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 RAB41Q5JT25 222 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 CCDC186Q7Z3E2 898 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 IRF2BP1Q8IU81 584 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 EHBP1Q8NDI1 1231 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 NUP62CLQ9H1M0 184 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 LINC00597Q9H2U6 94 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 SEMA4AQ9H3S1 761 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 CCSER2Q9H7U1 834 aa18.15■□□□□ 0.5
SFSWAP-205ENST00000537164 E2F8A0AVK6 867 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 SLC9A3R1O14745 358 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 PAPSS2O95340 614 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 PAEPP09466 180 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 MBL2P11226 248 aaPredicted RBP18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 TDGF1P13385 188 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 PSEN1P49768 467 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 LRMPQ12912 555 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 SGO2Q562F6 1265 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 KLHDC10Q6PID8 442 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 TTC30AQ86WT1 665 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 ADGRG2Q8IZP9 1017 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 SPEM1Q8N4L4 309 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 KIAA1549LQ6ZVL6 1849 aa18.14■□□□□ 0.49
SFSWAP-205ENST00000537164 CYP26A1O43174 497 aa18.13■□□□□ 0.49
SFSWAP-205ENST00000537164 TLR5O60602 858 aa18.13■□□□□ 0.49
SFSWAP-205ENST00000537164 NFATC1O95644 943 aa18.13■□□□□ 0.49
SFSWAP-205ENST00000537164 VDRP11473 427 aa18.13■□□□□ 0.49
SFSWAP-205ENST00000537164 ERCC5P28715 1186 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms