RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 WSB2Q9NYS7 404 aaPredicted RBP14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 CPQQ9Y646 472 aa14.87□□□□□ -0.03
NKX3-1-202ENST00000523261 TMEM131Q92545 1883 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 DOPEY2Q9Y3R5 2298 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 MYO9AB2RTY4 2548 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 SLC28A2O43868 658 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 OLFM2O95897 454 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 NTRK1P04629 796 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 HNF1BP35680 557 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 CSRP3P50461 194 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 GAD2Q05329 585 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 CCDC173Q0VFZ6 552 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 LY6DQ14210 128 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 CFAP221Q4G0U5 840 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 DCAF12L1Q5VU92 463 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 RINT1Q6NUQ1 792 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 KIAA1324Q6UXG2 1013 aaKnown RBP14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 C1orf186Q6ZWK4 172 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 SCN4BQ8IWT1 228 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 CHPFQ8IZ52 775 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 CADM4Q8NFZ8 388 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 ARID3AQ99856 593 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 TRPM5Q9NZQ8 1165 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 CFAP97Q9P2B7 532 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 DEC1Q9P2X7 70 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 ORC3Q9UBD5 711 aaPredicted RBP14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 GTF3C4Q9UKN8 822 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 DERAQ9Y315 318 aa14.86□□□□□ -0.03
NKX3-1-202ENST00000523261 KPNA7A9QM74 516 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 E9PMD0 336 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 TRIM24O15164 1050 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 HOXC11O43248 304 aaPredicted RBP14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 CTDNEP1O95476 244 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 OR52Z1P0C646 297 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 TARDBPQ13148 414 aaKnown RBP eCLIP14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 PKDCCQ504Y2 493 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 INTS6LQ5JSJ4 861 aaKnown RBP14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 SDE2Q6IQ49 451 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 NUDT18Q6ZVK8 323 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 METTL3Q86U44 580 aaKnown RBP14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 ENGASEQ8NFI3 743 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 BICD1Q96G01 975 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 ACBD6Q9BR61 282 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 USP36Q9P275 1121 aaKnown RBP14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 TBC1D14Q9P2M4 693 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 EIF2B4Q9UI10 523 aaKnown RBP14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 CPSF3Q9UKF6 684 aaKnown RBP14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 RAD54BQ9Y620 910 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 MYLKQ15746 1914 aa14.85□□□□□ -0.03
NKX3-1-202ENST00000523261 MYH11P35749 1972 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 ZNF840PA6NDX5 716 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 METTL12A8MUP2 240 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 TRIM66O15016 1216 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 PCDHGA12O60330 932 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 PLS3P13797 630 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 ACAT1P24752 427 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 CDC25AP30304 524 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 CSNK1EP49674 416 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 SMTNP53814 917 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 USP46P62068 366 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 KCNH2Q12809 1159 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 SF3A1Q15459 793 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 KIF19Q2TAC6 998 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 BTBD8Q5XKL5 378 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 SPATA2LQ8IUW3 424 aaPredicted RBP14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 DIS3L2Q8IYB7 885 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 PDCL2Q8N4E4 241 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 FUBP3Q96I24 572 aaKnown RBP eCLIP14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 DDX43Q9NXZ2 648 aaKnown RBP14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 DPP3Q9NY33 737 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 FTSJ1Q9UET6 329 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 C2CD2Q9Y426 696 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 PCDHGA1Q9Y5H4 931 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 SNX11Q9Y5W9 270 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 SLCO1B1Q9Y6L6 691 aa14.84□□□□□ -0.03
NKX3-1-202ENST00000523261 KCNJ18B7U540 433 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 BRINP1O60477 761 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 CDC45O75419 566 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 OAS1P00973 400 aaKnown RBP14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 FDPSP14324 419 aaKnown RBP14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 GUCY2CP25092 1073 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 MAGEA11P43364 429 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 LIG4P49917 911 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 SV2CQ496J9 727 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 COLEC12Q5KU26 742 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 ERICH1Q86X53 443 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 WASF1Q92558 559 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 OTUB2Q96DC9 234 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 SPATA17Q96L03 361 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 TIPINQ9BVW5 301 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 ITM2CQ9NQX7 267 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 L1RE1Q9UN81 338 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 DNM3Q9UQ16 869 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 CYP46A1Q9Y6A2 500 aa14.83□□□□□ -0.04
NKX3-1-202ENST00000523261 TEP1Q99973 2627 aaKnown RBP14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 A0A0B4J269 797 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 E2F8A0AVK6 867 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 CCT8P50990 548 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 FXR2P51116 673 aaKnown RBP eCLIP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms