RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 GLIS1Q8NBF1 620 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 SLC35B2Q8TB61 432 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 LINC01599Q8WXQ3 324 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 NDRG1Q92597 394 aaKnown RBP17.64■□□□□ 0.41
SREK1-212ENST00000522912 NKD2Q969F2 451 aaPredicted RBP17.64■□□□□ 0.41
SREK1-212ENST00000522912 C11orf84Q9BUA3 381 aaPredicted RBP17.64■□□□□ 0.41
SREK1-212ENST00000522912 UBN1Q9NPG3 1134 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.64■□□□□ 0.41
SREK1-212ENST00000522912 ZNF148Q9UQR1 794 aa17.64■□□□□ 0.41
SREK1-212ENST00000522912 MYBPHLA2RUH7 354 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 ADCY8P40145 1251 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 PTPN9P43378 593 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 BRCC3P46736 316 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 ITGA8P53708 1063 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 CDH6P55285 790 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 HDAC4P56524 1084 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 PLCB3Q01970 1234 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 LMNB2Q03252 620 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 SPDYCQ5MJ68 293 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 CEP85LQ5SZL2 805 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 SCYL2Q6P3W7 929 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 ARCQ7LC44 396 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 GSTA5Q7RTV2 222 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 ALLCQ8N6M5 410 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 ACTL9Q8TC94 416 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 RTP3Q9BQQ7 232 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 MED10Q9BTT4 135 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 CALN1Q9BXU9 219 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 RGS18Q9NS28 235 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 GPATCH2LQ9NWQ4 482 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 PHF24Q9UPV7 400 aa17.63■□□□□ 0.41
SREK1-212ENST00000522912 C9IYK1 514 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 ARVCFO00192 962 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 B3GAT3O94766 335 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 OTUD4Q01804 1114 aaKnown RBP17.62■□□□□ 0.41
SREK1-212ENST00000522912 ADCY1Q08828 1119 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 ZNF844Q08AG5 666 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 ADIGQ0VDE8 80 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 TUSC3Q13454 348 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 UBAP2Q5T6F2 1119 aaKnown RBP17.62■□□□□ 0.41
SREK1-212ENST00000522912 RFX6Q8HWS3 928 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 CENPIQ92674 756 aaPredicted RBP17.62■□□□□ 0.41
SREK1-212ENST00000522912 AAASQ9NRG9 546 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 GOLGA6CA6NDK9 693 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 INPPL1O15357 1258 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 CAPN15O75808 1086 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 ITGAVP06756 1048 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 ZSCAN5DPP0CG00 497 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 GOLGA6DP0CG33 693 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 ETS1P14921 441 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 RABGGTBP53611 331 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 MAP3K7CLP57077 242 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 DPYSL3Q14195 570 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 BOLA3Q53S33 107 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 ZC3H12AQ5D1E8 599 aaKnown RBP17.62■□□□□ 0.41
SREK1-212ENST00000522912 CCDC89Q8N998 374 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 SH3TC2Q8TF17 1288 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 HASPINQ8TF76 798 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 KCTD13Q8WZ19 329 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 DDX23Q9BUQ8 820 aaKnown RBP17.62■□□□□ 0.41
SREK1-212ENST00000522912 PABPC3Q9H361 631 aaKnown RBP17.62■□□□□ 0.41
SREK1-212ENST00000522912 SEMA4AQ9H3S1 761 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 LRRC4CQ9HCJ2 640 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 KRT82Q9NSB4 513 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 GOLGA6AQ9NYA3 693 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 CDH9Q9ULB4 789 aa17.62■□□□□ 0.41
SREK1-212ENST00000522912 FAM200BP0CF97 657 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 CHKAP35790 457 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 NDUFV1P49821 464 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 ATXN1P54253 815 aaKnown RBP17.61■□□□□ 0.41
SREK1-212ENST00000522912 PRMT2P55345 433 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 SLC8A3P57103 927 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 ARHGEF6Q15052 776 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 CA9Q16790 459 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 EFHC1Q5JVL4 640 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 FAM35AQ86V20 835 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 TEKT4Q8WW24 435 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 EXOC4Q96A65 974 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 PCED1BQ96HM7 432 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 SMOQ99835 787 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 TMEM121Q9BTD3 319 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 SNRNP25Q9BV90 132 aaKnown RBP17.61■□□□□ 0.41
SREK1-212ENST00000522912 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.61■□□□□ 0.411e-5■■■□□ 18
SREK1-212ENST00000522912 TMBIM4Q9HC24 238 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 TMEM30AQ9NV96 361 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 ANAPC5Q9UJX4 755 aa17.61■□□□□ 0.41
SREK1-212ENST00000522912 F8W810 466 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 B4GALT3O60512 393 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 ITGB1P05556 798 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 ODC1P11926 461 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 PECAM1P16284 738 aaPredicted RBP17.6■□□□□ 0.41
SREK1-212ENST00000522912 IL4RP24394 825 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 TTC13Q8NBP0 860 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 MYCBPAPQ8TBZ2 947 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 C10orf88Q9H8K7 445 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.6■□□□□ 0.419e-7■□□□□ 9.5
SREK1-212ENST00000522912 AP1G2O75843 785 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 CYP11A1P05108 521 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 RARGP13631 454 aa17.6■□□□□ 0.41
SREK1-212ENST00000522912 CACNA2D1P54289 1103 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms