RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 SLC30A5Q8TAD4 765 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 KCTD13Q8WZ19 329 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 TCEAL4Q96EI5 215 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 TRMT2BQ96GJ1 504 aaKnown RBP15.75■□□□□ 0.11
NUP54-213ENST00000513352 CPXM1Q96SM3 734 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 PCDHB18PQ96TA0 734 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 TTLL2Q9BWV7 592 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 POMKQ9H5K3 350 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 WDR6Q9NNW5 1121 aaKnown RBP15.75■□□□□ 0.11
NUP54-213ENST00000513352 COMMD8Q9NX08 183 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 TRPM5Q9NZQ8 1165 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 ARHGAP20Q9P2F6 1191 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 NOTCH4Q99466 2003 aa15.75■□□□□ 0.11
NUP54-213ENST00000513352 OBSL1O75147 1896 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 ZBED1O96006 694 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 CYP1A1P04798 512 aaPredicted RBP15.74■□□□□ 0.11
NUP54-213ENST00000513352 CEBPBP17676 345 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 SP100P23497 879 aaPredicted RBP15.74■□□□□ 0.11
NUP54-213ENST00000513352 CCR2P41597 374 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 SLC5A9Q2M3M2 681 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 PTPN20Q4JDL3 420 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 RAB41Q5JT25 222 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 OR6B2Q6IFH4 312 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 PTCRAQ6ISU1 281 aaPredicted RBP15.74■□□□□ 0.11
NUP54-213ENST00000513352 WDR59Q6PJI9 974 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 PDZD8Q8NEN9 1154 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 ITFG1Q8TB96 612 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 STK32AQ8WU08 396 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 NDRG1Q92597 394 aaKnown RBP15.74■□□□□ 0.11
NUP54-213ENST00000513352 MRPS31Q92665 395 aaKnown RBP15.74■□□□□ 0.11
NUP54-213ENST00000513352 MYRFLQ96LU7 910 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 NECTIN4Q96NY8 510 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 PANX2Q96RD6 677 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 TRPC7Q9HCX4 862 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 TJP2Q9UDY2 1190 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 CHORDC1Q9UHD1 332 aaPredicted RBP15.74■□□□□ 0.11
NUP54-213ENST00000513352 SCML2Q9UQR0 700 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 FAM50BQ9Y247 325 aa15.74■□□□□ 0.11
NUP54-213ENST00000513352 EYSQ5T1H1 3165 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 DENND4CQ5VZ89 1909 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 DDX3XO00571 662 aaKnown RBP eCLIP15.73■□□□□ 0.113e-11■■□□□ 12
NUP54-213ENST00000513352 AKR1B10O60218 316 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 FBXO21O94952 628 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 PAPLNO95428 1278 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 ERBB2P04626 1255 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 GBP2P32456 591 aaPredicted RBP15.73■□□□□ 0.11
NUP54-213ENST00000513352 CDH5P33151 784 aaPredicted RBP15.73■□□□□ 0.11
NUP54-213ENST00000513352 EPHA5P54756 1037 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 GSDMDP57764 484 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 ARID5BQ14865 1188 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 TEAD2Q15562 447 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 AAK1Q2M2I8 961 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 C2CD6Q53TS8 623 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 GPR158Q5T848 1215 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 MMS22LQ6ZRQ5 1243 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 GAREM2Q75VX8 874 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 SHKBP1Q8TBC3 707 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 CLEC4CQ8WTT0 213 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 GOLGA1Q92805 767 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 FAM149B1Q96BN6 582 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 CCDC42Q96M95 316 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 CHP1Q99653 195 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 C11orf70Q9BRQ4 267 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 SYT11Q9BT88 431 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 SLC4A5Q9BY07 1137 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 LRRC3Q9BY71 257 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 IL21Q9HBE4 155 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 CYLDQ9NQC7 956 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 CNGB3Q9NQW8 809 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 TLR8Q9NR97 1041 aaKnown RBP15.73■□□□□ 0.11
NUP54-213ENST00000513352 ADAMTS1Q9UHI8 967 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 NAGPAQ9UK23 515 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 DENND4AQ7Z401 1863 aa15.73■□□□□ 0.11
NUP54-213ENST00000513352 ANAPC1Q9H1A4 1944 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 A0A1W2PQH9 124 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 GOLGA8SH3BPF8 625 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 TADA3O75528 432 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 GABBR2O75899 941 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 F11P03951 625 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 PTMAP06454 111 aaKnown RBP15.72■□□□□ 0.11
NUP54-213ENST00000513352 UNGP13051 313 aaPredicted RBP15.72■□□□□ 0.11
NUP54-213ENST00000513352 YWHAGP61981 247 aaKnown RBP eCLIP15.72■□□□□ 0.11
NUP54-213ENST00000513352 CENPCQ03188 943 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 PUS10Q3MIT2 529 aaKnown RBP15.72■□□□□ 0.11
NUP54-213ENST00000513352 PRSS36Q5K4E3 855 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 ACAD10Q6JQN1 1059 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 CCDC186Q7Z3E2 898 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 PHLDB2Q86SQ0 1253 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 SCUBE3Q8IX30 993 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 ARHGAP18Q8N392 663 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.72■□□□□ 0.11
NUP54-213ENST00000513352 OVCA2Q8WZ82 227 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 SUSD6Q92537 303 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 C18orf8Q96DM3 657 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 NACA2Q9H009 215 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 NHEJ1Q9H9Q4 299 aaPredicted RBP15.72■□□□□ 0.11
NUP54-213ENST00000513352 AVENQ9NQS1 362 aaPredicted RBP15.72■□□□□ 0.11
NUP54-213ENST00000513352 TAS2R14Q9NYV8 317 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 IL37Q9NZH6 218 aa15.72■□□□□ 0.11
NUP54-213ENST00000513352 ADAM22Q9P0K1 906 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms