RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 NDUFV2P19404 249 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 LMO2P25791 158 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 GRIK1P39086 918 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 TRMT11Q7Z4G4 463 aaKnown RBP16.67■□□□□ 0.26
HDAC6-236ENST00000498808 GLRX5Q86SX6 157 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 NAT16Q8N8M0 369 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 GLIS3Q8NEA6 775 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 KBTBD7Q8WVZ9 684 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 ZNF419Q96HQ0 510 aaPredicted RBP16.67■□□□□ 0.26
HDAC6-236ENST00000498808 CEP295NLQ96MC4 621 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 DKK4Q9UBT3 224 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 SIX4Q9UIU6 781 aa16.67■□□□□ 0.26
HDAC6-236ENST00000498808 TULP1O00294 542 aaPredicted RBP16.66■□□□□ 0.26
HDAC6-236ENST00000498808 TRIM24O15164 1050 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 TBCAO75347 108 aaKnown RBP16.66■□□□□ 0.26
HDAC6-236ENST00000498808 ZNF217O75362 1048 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 TULP3O75386 442 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 ABL1P00519 1130 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 KRT18P05783 430 aaKnown RBP16.66■□□□□ 0.26
HDAC6-236ENST00000498808 GAD2Q05329 585 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 GRIK2Q13002 908 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 C10orf76Q5T2E6 689 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 LIMS2Q7Z4I7 341 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 RGL4Q8IZJ4 473 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 TERB1Q8NA31 727 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 KCNV2Q8TDN2 545 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 SAAL1Q96ER3 474 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 CRELD1Q96HD1 420 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 FAM213AQ9BRX8 229 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 TBC1D14Q9P2M4 693 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 ITGA11Q9UKX5 1188 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 PCOLCE2Q9UKZ9 415 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 CDH9Q9ULB4 789 aa16.66■□□□□ 0.26
HDAC6-236ENST00000498808 GOLGA4Q13439 2230 aaKnown RBP16.65■□□□□ 0.26
HDAC6-236ENST00000498808 F8VP50 259 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 HOXC11O43248 304 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-236ENST00000498808 PPP1R37O75864 691 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 KRT19P08727 400 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 MBL2P11226 248 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-236ENST00000498808 ANXA13P27216 316 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 MAOBP27338 520 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 NTSR1P30989 418 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 PPP3CCP48454 512 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 NOP14P78316 857 aaKnown RBP16.65■□□□□ 0.26
HDAC6-236ENST00000498808 KCNA1Q09470 495 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 TAF10Q12962 218 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 POSTNQ15063 836 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 RILPL1Q5EBL4 403 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 EGFLAMQ63HQ2 1017 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 ARL6IP4Q66PJ3 421 aaKnown RBP16.65■□□□□ 0.26
HDAC6-236ENST00000498808 TMPRSS7Q7RTY8 843 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 ZNF720Q7Z2F6 126 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 DDX42Q86XP3 938 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDAC6-236ENST00000498808 RAD54LQ92698 747 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 ERLEC1Q96DZ1 483 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 PCED1BQ96HM7 432 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 ZFRQ96KR1 1074 aaKnown RBP16.65■□□□□ 0.26
HDAC6-236ENST00000498808 ACOX2Q99424 681 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 FAM124BQ9H5Z6 455 aaPredicted RBP16.65■□□□□ 0.26
HDAC6-236ENST00000498808 TMEM30AQ9NV96 361 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 DEC1Q9P2X7 70 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 SUSD2Q9UGT4 822 aa16.65■□□□□ 0.26
HDAC6-236ENST00000498808 E2F8A0AVK6 867 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 SLC26A4O43511 780 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 RBP5P82980 135 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 CYP27A1Q02318 531 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 DPH6Q7L8W6 267 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 SFR1Q86XK3 245 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 MARCH9Q86YJ5 346 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 IPO4Q8TEX9 1081 aaKnown RBP16.64■□□□□ 0.25
HDAC6-236ENST00000498808 CACTINQ8WUQ7 758 aaKnown RBP16.64■□□□□ 0.25
HDAC6-236ENST00000498808 CALML4Q96GE6 196 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 C8orf48Q96LL4 319 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 AK8Q96MA6 479 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 STRA6Q9BX79 667 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 MTMR12Q9C0I1 747 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 SLC6A17Q9H1V8 727 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 TOR4AQ9NXH8 423 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 RBAKQ9NYW8 714 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-236ENST00000498808 EHD2Q9NZN4 543 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 KIAA1522Q9P206 1035 aaPredicted RBP16.64■□□□□ 0.25
HDAC6-236ENST00000498808 STARD13Q9Y3M8 1113 aa16.64■□□□□ 0.25
HDAC6-236ENST00000498808 TRIM66O15016 1216 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 PRB1P04280 392 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 PDGFRBP09619 1106 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 CACNA2D1P54289 1103 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 MAPRE1Q15691 268 aaKnown RBP16.63■□□□□ 0.25
HDAC6-236ENST00000498808 BTBD8Q5XKL5 378 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 BBS7Q8IWZ6 715 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 SPRYD3Q8NCJ5 442 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 BAHD1Q8TBE0 780 aaPredicted RBP16.63■□□□□ 0.25
HDAC6-236ENST00000498808 WBP2Q969T9 261 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 HVCN1Q96D96 273 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 OTUB2Q96DC9 234 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 ZDHHC5Q9C0B5 715 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 IL21RQ9HBE5 538 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 PDE11AQ9HCR9 933 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 NME7Q9Y5B8 376 aa16.63■□□□□ 0.25
HDAC6-236ENST00000498808 GOLGA8IPA6NC78 632 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms