RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 CLEC9AQ6UXN8 241 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 SYNE4Q8N205 404 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 FSTL5Q8N475 847 aaPredicted RBP6.29□□□□□ -1.4
SSR3-208ENST00000496050 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 ADAM2Q99965 735 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 RTKNQ9BST9 563 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 VN1R3Q9BXE9 311 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 PABPC3Q9H361 631 aaKnown RBP6.29□□□□□ -1.4
SSR3-208ENST00000496050 GLOD4Q9HC38 313 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 RAPGEFL1Q9UHV5 662 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 VPS51Q9UID3 782 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 FZD1Q9UP38 647 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 SNX14Q9Y5W7 946 aa6.29□□□□□ -1.4
SSR3-208ENST00000496050 HMX3A6NHT5 357 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 ZAR1LA6NP61 321 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 ADM5C9JUS6 153 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 J3KTA2 159 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 SLC16A3O15427 465 aaKnown RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 SPDEFO95238 335 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 GYS1P13807 737 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 PPP3CBP16298 524 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 CST5P28325 142 aaPredicted RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 HNRNPMP52272 730 aaKnown RBP eCLIP6.28□□□□□ -1.42e-9■■□□□ 12.7
SSR3-208ENST00000496050 SLC25A3Q00325 362 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 LY6KQ17RY6 165 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 SLC9A4Q6AI14 798 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 RINT1Q6NUQ1 792 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 MOGAT3Q86VF5 341 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 SLC44A2Q8IWA5 706 aaPredicted RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 PALM2Q8IXS6 379 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 SUN3Q8TAQ9 357 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 HAS1Q92839 578 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 PGBD1Q96JS3 809 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 UBXN10Q96LJ8 280 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 PLEKHG4BQ96PX9 1271 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 DDX23Q9BUQ8 820 aaKnown RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 MAF1Q9H063 256 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 SEPSECSQ9HD40 501 aaKnown RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 TRIM36Q9NQ86 728 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 TESQ9UGI8 421 aaKnown RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 SRP68Q9UHB9 627 aaKnown RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 STEAP1Q9UHE8 339 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 DRG1Q9Y295 367 aaKnown RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 SLC27A6Q9Y2P4 619 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 LRRFIP2Q9Y608 721 aaKnown RBP6.28□□□□□ -1.4
SSR3-208ENST00000496050 COL15A1P39059 1388 aa6.28□□□□□ -1.4
SSR3-208ENST00000496050 A1L4Q6 167 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 UNC119BA6NIH7 251 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 EFCAB8A8MWE9 144 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 FAM155BO75949 473 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 NR4A1P22736 598 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 RBL1P28749 1068 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 ZEB1P37275 1124 aaPredicted RBP6.27□□□□□ -1.41
SSR3-208ENST00000496050 ATXN1P54253 815 aaKnown RBP6.27□□□□□ -1.41
SSR3-208ENST00000496050 CTSWP56202 376 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 SP2Q02086 613 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 SCAPQ12770 1279 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 CSHL1Q14406 222 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 CLCA4Q14CN2 919 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 SF3B3Q15393 1217 aaKnown RBP6.27□□□□□ -1.41
SSR3-208ENST00000496050 FBXO47Q5MNV8 452 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 TEDDM1Q5T9Z0 273 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 RINLQ6ZS11 566 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 GPR149Q86SP6 731 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 ARHGEF19Q8IW93 802 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 FTSJ3Q8IY81 847 aaKnown RBP6.27□□□□□ -1.41
SSR3-208ENST00000496050 LNX2Q8N448 690 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 TOR1AIP2Q8NFQ8 470 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 OR6Y1Q8NGX8 325 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 SPPL3Q8TCT6 385 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 GLG1Q92896 1179 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 SDCCAG3Q96C92 435 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 RSPRY1Q96DX4 576 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 TAF1DQ9H5J8 278 aaPredicted RBP6.27□□□□□ -1.41
SSR3-208ENST00000496050 MLXIPQ9HAP2 919 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 PRDM8Q9NQV8 689 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 SAGE1Q9NXZ1 904 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 RRN3Q9NYV6 651 aa6.27□□□□□ -1.41
SSR3-208ENST00000496050 AGPSO00116 658 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 EIF3FO00303 357 aaPredicted RBP6.26□□□□□ -1.41
SSR3-208ENST00000496050 EXOC5O00471 708 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 PCDH17O14917 1159 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 ONECUT2O95948 504 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 LMNAP02545 664 aaKnown RBP6.26□□□□□ -1.41
SSR3-208ENST00000496050 CD53P19397 219 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 YY1P25490 414 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 PTGS2P35354 604 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 ADD2P35612 726 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 MAGEA10P43363 369 aaPredicted RBP6.26□□□□□ -1.41
SSR3-208ENST00000496050 AARSP49588 968 aaKnown RBP eCLIP6.26□□□□□ -1.41
SSR3-208ENST00000496050 ADAM17P78536 824 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 TP53BP2Q13625 1128 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 GRM4Q14833 912 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 ACOX1Q15067 660 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 RALBP1Q15311 655 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 TBCCQ15814 346 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 LIN54Q6MZP7 749 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 VWA1Q6PCB0 445 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 RAB11FIP2Q7L804 512 aa6.26□□□□□ -1.41
SSR3-208ENST00000496050 CAND1Q86VP6 1230 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms