RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 MLH1P40692 756 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 GJA8P48165 433 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 ROR1Q01973 937 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 GRB10Q13322 594 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 EEPD1Q7L9B9 569 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 BEST2Q8NFU1 509 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 TSPAN17Q96FV3 270 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 FGFBP2Q9BYJ0 223 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 UTP6Q9NYH9 597 aaKnown RBP11.92□□□□□ -0.5
U2AF1-209ENST00000475639 NAALADL1Q9UQQ1 740 aa11.92□□□□□ -0.5
U2AF1-209ENST00000475639 TNRQ92752 1358 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 CFAP99D6REC4 459 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 F8W810 466 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ENO1P06733 434 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ADARP55265 1226 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 KCNH2Q12809 1159 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 IZUMO3Q5VZ72 239 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 SH3BP5LQ7L8J4 393 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 SCUBE1Q8IWY4 988 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 COQ7Q99807 217 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 SIK2Q9H0K1 926 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 DHX35Q9H5Z1 703 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ARL8BQ9NVJ2 186 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ZC3H7BQ9UGR2 993 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 IP6K2Q9UHH9 426 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 SLC30A1Q9Y6M5 507 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 KIF13BQ9NQT8 1826 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 FAM47DPA6NHR8 397 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 RGS2P41220 211 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ERFP50548 548 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 EMP3P54852 163 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 VEPH1Q14D04 833 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 KYNUQ16719 465 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 TWF2Q6IBS0 349 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 C16orf89Q6UX73 402 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 TRIM72Q6ZMU5 477 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ARMCX6Q7L4S7 300 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 FAM160B2Q86V87 743 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 SHCBP1Q8NEM2 672 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 PPP1R14BQ96C90 147 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 PTCD3Q96EY7 689 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 POP1Q99575 1024 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 KLHL25Q9H0H3 589 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 EPS8L2Q9H6S3 715 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 CYLDQ9NQC7 956 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ARHGEF38Q9NXL2 777 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 DDX56Q9NY93 547 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 C3orf70A6NLC5 250 aaPredicted RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 PHKG2P15735 406 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 CHRNB2P17787 502 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ITGAXP20702 1163 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 BAG6P46379 1132 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 GALK1P51570 392 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 MARSP56192 900 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 CDC16Q13042 620 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 SHROOM1Q2M3G4 852 aaPredicted RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 ARMCX4Q5H9R4 360 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 TMC5Q6UXY8 1006 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 EBF3Q9H4W6 596 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 GOLGA4Q13439 2230 aaKnown RBP11.91□□□□□ -0.5
U2AF1-209ENST00000475639 DLEC1Q9Y238 1755 aa11.91□□□□□ -0.5
U2AF1-209ENST00000475639 IQCA1LA6NCM1 817 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 H7C0S8 307 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 SNPHO15079 494 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 MUTP22033 750 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 TALDO1P37837 337 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 KCNJ1P48048 391 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 NT5C2P49902 561 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 SLC16A1P53985 500 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 GTF2H3Q13889 308 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 DOK7Q18PE1 504 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 SH3D19Q5HYK7 790 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 FOXR2Q6PJQ5 311 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 AHI1Q8N157 1196 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 ZNF564Q8TBZ8 553 aaPredicted RBP11.9□□□□□ -0.5
U2AF1-209ENST00000475639 SNF8Q96H20 258 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 ELMO2Q96JJ3 720 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 TRABDQ9H4I3 376 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 PTTG2Q9NZH5 202 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 SPATA7Q9P0W8 599 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 LGALS13Q9UHV8 139 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 TCRBV7S2A1N4TA0A589 114 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 C2CD2LO14523 706 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 BIRC5O15392 142 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 PDE8BO95263 885 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 FGFR1P11362 822 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 CDK4P11802 303 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 CRABP2P29373 138 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 STAT3P40763 770 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 MARCKSL1P49006 195 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 GPSM2P81274 684 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 PWP1Q13610 501 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 EFL1Q7Z2Z2 1120 aaKnown RBP11.9□□□□□ -0.5
U2AF1-209ENST00000475639 SYNE4Q8N205 404 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 ARL10Q8N8L6 244 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 LNX1Q8TBB1 728 aaPredicted RBP11.9□□□□□ -0.5
U2AF1-209ENST00000475639 RFFLQ8WZ73 363 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 FANCEQ9HB96 536 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms