RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 MED15Q96RN5 788 aa25.38■■□□□ 1.65
CPNE1-223ENST00000475146 PNPLA8Q9NP80 782 aa25.38■■□□□ 1.65
CPNE1-223ENST00000475146 DACH1Q9UI36 760 aa25.38■■□□□ 1.65
CPNE1-223ENST00000475146 PATJQ8NI35 1801 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 HELZP42694 1942 aaKnown RBP25.37■■□□□ 1.65
CPNE1-223ENST00000475146 FAM92AA1XBS5 289 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 HHLA1C9JL84 531 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 LEFTY2O00292 366 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 CD19P15391 556 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 TCF3P15923 654 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 ARHGAP17Q68EM7 881 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 TXNDC11Q6PKC3 985 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 C1orf210Q8IVY1 113 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 LMO3Q8TAP4 145 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 OSCP1Q8WVF1 389 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 NACA2Q9H009 215 aa25.37■■□□□ 1.65
CPNE1-223ENST00000475146 COCHO43405 550 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 RPS9P46781 194 aaKnown RBP25.36■■□□□ 1.65
CPNE1-223ENST00000475146 GOLGA7BQ2TAP0 167 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 SGO2Q562F6 1265 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 ZNF687Q8N1G0 1237 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 CPA6Q8N4T0 437 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 UBR7Q8N806 425 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 EHBP1Q8NDI1 1231 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 GPT2Q8TD30 523 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 KAT5Q92993 513 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 PHOX2BQ99453 314 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 INTS2Q9H0H0 1204 aaKnown RBP25.36■■□□□ 1.65
CPNE1-223ENST00000475146 CCSER2Q9H7U1 834 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 LMAN1LQ9HAT1 526 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 TLR8Q9NR97 1041 aaKnown RBP25.36■■□□□ 1.65
CPNE1-223ENST00000475146 PCDHB4Q9Y5E5 795 aa25.36■■□□□ 1.65
CPNE1-223ENST00000475146 MYO16Q9Y6X6 1858 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 CYP26A1O43174 497 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 ZDHHC11BP0C7U3 371 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 TUBP50607 506 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 SLC8A3P57103 927 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 ZXDBP98169 803 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 FZD5Q13467 585 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 PON2Q15165 354 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 SNX30Q5VWJ9 437 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 TMEM270Q6UE05 265 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 RRAGAQ7L523 313 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 ARHGEF19Q8IW93 802 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 ATP2A3Q93084 1043 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 CFAP97Q9P2B7 532 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 SCML2Q9UQR0 700 aa25.35■■□□□ 1.65
CPNE1-223ENST00000475146 OTOL1A6NHN0 477 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-223ENST00000475146 LAMTOR5O43504 91 aa25.34■■□□□ 1.65
CPNE1-223ENST00000475146 MTIF2P46199 727 aaKnown RBP25.34■■□□□ 1.65
CPNE1-223ENST00000475146 LRRC32Q14392 662 aa25.34■■□□□ 1.65
CPNE1-223ENST00000475146 DDX42Q86XP3 938 aaKnown RBP eCLIP25.34■■□□□ 1.65
CPNE1-223ENST00000475146 ANKRD52Q8NB46 1076 aa25.34■■□□□ 1.65
CPNE1-223ENST00000475146 ECT2Q9H8V3 914 aa25.34■■□□□ 1.65
CPNE1-223ENST00000475146 HESX1Q9UBX0 185 aa25.34■■□□□ 1.65
CPNE1-223ENST00000475146 TSPAN16Q9UKR8 245 aa25.34■■□□□ 1.65
CPNE1-223ENST00000475146 CACNA1HO95180 2353 aa25.34■■□□□ 1.65
CPNE1-223ENST00000475146 SCAMP3O14828 347 aaKnown RBP25.33■■□□□ 1.65
CPNE1-223ENST00000475146 TLR5O60602 858 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 CHRNB1P11230 501 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 VDRP11473 427 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 ERCC5P28715 1186 aaPredicted RBP25.33■■□□□ 1.65
CPNE1-223ENST00000475146 PGFP49763 221 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 KIF11P52732 1056 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 EML3Q32P44 896 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 FAM114A1Q8IWE2 563 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 CHRDQ9H2X0 955 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 THAP9Q9H5L6 903 aa25.33■■□□□ 1.65
CPNE1-223ENST00000475146 RBM12Q9NTZ6 932 aaKnown RBP25.33■■□□□ 1.65
CPNE1-223ENST00000475146 BCAT1P54687 386 aa25.32■■□□□ 1.64
CPNE1-223ENST00000475146 AMPD2Q01433 879 aa25.32■■□□□ 1.64
CPNE1-223ENST00000475146 GCNT1Q02742 428 aa25.32■■□□□ 1.64
CPNE1-223ENST00000475146 PIGZQ86VD9 579 aa25.32■■□□□ 1.64
CPNE1-223ENST00000475146 TTC30AQ86WT1 665 aa25.32■■□□□ 1.64
CPNE1-223ENST00000475146 IRF2BP1Q8IU81 584 aa25.32■■□□□ 1.64
CPNE1-223ENST00000475146 CRACR2AQ9BSW2 395 aa25.32■■□□□ 1.64
CPNE1-223ENST00000475146 LINC00597Q9H2U6 94 aa25.32■■□□□ 1.64
CPNE1-223ENST00000475146 WDFY4Q6ZS81 3184 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 A0A1W2PQH9 124 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 NFATC1O95644 943 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 PAEPP09466 180 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 MTAPQ13126 283 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 NR1H3Q13133 447 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 CCDC186Q7Z3E2 898 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 RBBP8NLQ8NC74 664 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-223ENST00000475146 NAGPAQ9UK23 515 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 KIAA1257Q9ULG3 409 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 SH3BP1Q9Y3L3 701 aa25.31■■□□□ 1.64
CPNE1-223ENST00000475146 O00370 1275 aa25.3■■□□□ 1.64
CPNE1-223ENST00000475146 SLC9A3R1O14745 358 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-223ENST00000475146 GJA4P35212 333 aa25.3■■□□□ 1.64
CPNE1-223ENST00000475146 PDE4CQ08493 712 aa25.3■■□□□ 1.64
CPNE1-223ENST00000475146 BST2Q10589 180 aaKnown RBP25.3■■□□□ 1.64
CPNE1-223ENST00000475146 DGKKQ5KSL6 1271 aa25.3■■□□□ 1.64
CPNE1-223ENST00000475146 ALYREFQ86V81 257 aaKnown RBP25.3■■□□□ 1.64
CPNE1-223ENST00000475146 UBA3Q8TBC4 463 aa25.3■■□□□ 1.64
CPNE1-223ENST00000475146 ZFRQ96KR1 1074 aaKnown RBP25.3■■□□□ 1.64
CPNE1-223ENST00000475146 KREMEN1Q96MU8 473 aa25.3■■□□□ 1.64
CPNE1-223ENST00000475146 IER2Q9BTL4 223 aa25.3■■□□□ 1.64
CPNE1-223ENST00000475146 UBXN6Q9BZV1 441 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms