RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 WNT7BP56706 349 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 UGCGQ16739 394 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 DOK7Q18PE1 504 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 TMEM259Q4ZIN3 620 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 TEX44Q53QW1 395 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 CYP4A22Q5TCH4 519 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 ATG16L1Q676U5 607 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 SCARA3Q6AZY7 606 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 DEFB107AQ8IZN7 70 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 ABRAQ8N0Z2 381 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 PPP1R14CQ8TAE6 165 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 ARHGEF1Q92888 912 aaKnown RBP14.52□□□□□ -0.09
VPS52-212ENST00000445902 PRPF18Q99633 342 aaKnown RBP14.52□□□□□ -0.09
VPS52-212ENST00000445902 PLLPQ9Y342 182 aa14.52□□□□□ -0.09
VPS52-212ENST00000445902 CCDC166P0CW27 439 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 SPP2Q13103 211 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 WDR44Q5JSH3 913 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 KLC3Q6P597 504 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 POLNQ7Z5Q5 900 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 CATSPER2Q96P56 530 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 TMOD2Q9NZR1 351 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 CDH22Q9UJ99 828 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 POMPQ9Y244 141 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 GMEB1Q9Y692 573 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 AK5Q9Y6K8 562 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 LOXHD1Q8IVV2 1947 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 SDR42E2A6NKP2 422 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 HNRNPDLO14979 420 aaKnown RBP14.51□□□□□ -0.09
VPS52-212ENST00000445902 TRPA1O75762 1119 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 HLA-DRAP01903 254 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 YWHABP31946 246 aaKnown RBP14.51□□□□□ -0.09
VPS52-212ENST00000445902 FDFT1P37268 417 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 ECE1P42892 770 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 ZNF394Q53GI3 561 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 SH3D19Q5HYK7 790 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 FAXCQ5TGI0 409 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 C15orf52Q6ZUT6 534 aaKnown RBP14.51□□□□□ -0.09
VPS52-212ENST00000445902 ADGRG6Q86SQ4 1221 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 ARHGEF38Q9NXL2 777 aa14.51□□□□□ -0.09
VPS52-212ENST00000445902 TMEM191CA6NGB0 347 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 E7ESA3 106 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 KLF11O14901 512 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 ITM2AO43736 263 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 ADCY3O60266 1144 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 TMEM191BP0C7N4 346 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 ITGB5P18084 799 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 MSX2P35548 267 aaPredicted RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 ATXN3P54252 364 aaPredicted RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 SMAD1Q15797 465 aaKnown RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 MROH9Q5TGP6 573 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 VWA5B1Q5TIE3 1220 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 TRIM42Q8IWZ5 723 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 DCUN1D1Q96GG9 259 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 MRPL1Q9BYD6 325 aaKnown RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 LIN28AQ9H9Z2 209 aaKnown RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 XPNPEP1Q9NQW7 623 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 ZNF711Q9Y462 761 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 A0A1B0GTW7 788 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 GH2P01242 217 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 P4HBP07237 508 aaKnown RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 FUT4P22083 530 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 ALDH1A3P47895 512 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 NPTX2P47972 431 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 COPAP53621 1224 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 CYLC2Q14093 348 aaPredicted RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 XKR9Q5GH70 373 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 MAP3K21Q5TCX8 1036 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 TTC39BQ5VTQ0 682 aaPredicted RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 DNAJC24Q6P3W2 148 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 TRIM67Q6ZTA4 783 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 TMEM161BQ8NDZ6 487 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 LRRN4Q8WUT4 740 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 GAB3Q8WWW8 586 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 C1orf21Q9H246 121 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 XAB2Q9HCS7 855 aaKnown RBP14.5□□□□□ -0.09
VPS52-212ENST00000445902 PPME1Q9Y570 386 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 MAD1L1Q9Y6D9 718 aa14.5□□□□□ -0.09
VPS52-212ENST00000445902 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.096e-6■■■■■ 31.6
VPS52-212ENST00000445902 NCF2P19878 526 aaPredicted RBP14.49□□□□□ -0.09
VPS52-212ENST00000445902 STX3Q13277 289 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 ITGA9Q13797 1035 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 CNGA3Q16281 694 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 APOBEC3HQ6NTF7 200 aaKnown RBP14.49□□□□□ -0.09
VPS52-212ENST00000445902 C16orf46Q6P387 395 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 ZNF677Q86XU0 584 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 NDUFAF2Q8N183 169 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 BSNDQ8WZ55 320 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 MFSD14AQ96MC6 490 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 ZNF778Q96MU6 729 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 APOBEC3GQ9HC16 384 aaKnown RBP14.49□□□□□ -0.09
VPS52-212ENST00000445902 NDUFA13Q9P0J0 144 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 DNAJC16Q9Y2G8 782 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 PTPRJQ12913 1337 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 TTLL13PA6NNM8 815 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 H3BNX3 289 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 H3BSA7 217 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 ABCB5Q2M3G0 1257 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 TSHZ1Q6ZSZ6 1077 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 SLC26A11Q86WA9 606 aa14.49□□□□□ -0.09
VPS52-212ENST00000445902 PHF13Q86YI8 300 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms