RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 CHST13Q8NET6 341 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ANKRD20A12PQ8NF67 263 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ETNPPLQ8TBG4 499 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 GPR152Q8TDT2 470 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 TCP11Q8WWU5 503 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 NANOS1Q8WY41 292 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 WASF1Q92558 559 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 KRT35Q92764 455 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 MIEF2Q96C03 454 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 C11orf24Q96F05 449 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 BTBD6Q96KE9 485 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 YME1L1Q96TA2 773 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 DDX50Q9BQ39 737 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 SEMA6BQ9H3T3 888 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 XKR8Q9H6D3 395 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 GDAP2Q9NXN4 497 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 HSPBP1Q9NZL4 362 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 AMACRQ9UHK6 382 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 HOOK1Q9UJC3 728 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 USP20Q9Y2K6 914 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PCDHGB6Q9Y5F9 930 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 MAST3O60307 1309 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 TMEM221A6NGB7 291 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 UPK3BL1B0FP48 263 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 UPK3BL2E5RIL1 263 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 STX16-NPEPL1H3BU86 382 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 SMAD6O43541 496 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 PTP4A3O75365 173 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 OFD1O75665 1012 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 SURF6O75683 361 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 ZNF189O75820 626 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 FSBPO95073 299 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 DLGAP3O95886 979 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 MT-CO1P00395 513 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ALBP02768 609 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 QDPRP09417 244 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PAMP19021 973 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 HOXA6P31267 233 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PRIM2P49643 509 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ACTR1AP61163 376 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 RPP38P78345 283 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 TRPC3Q13507 836 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 STIM1Q13586 685 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 CRY1Q16526 586 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 DPYSL2Q16555 572 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ERCC6LQ2NKX8 1250 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 C2orf76Q3KRA6 126 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 TREML2Q5T2D2 321 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 RNASEH2BQ5TBB1 312 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 NDUFAF5Q5TEU4 345 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 SHQ1Q6PI26 577 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 DCLRE1AQ6PJP8 1040 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 OGFOD3Q6PK18 319 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 C6orf15Q6UXA7 325 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 NCCRP1Q6ZVX7 275 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 PIWIL3Q7Z3Z3 882 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 VSIG10LQ86VR7 867 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 SH3RF3Q8TEJ3 882 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 NKD1Q969G9 470 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PDLIM2Q96JY6 352 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 HSH2DQ96JZ2 352 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 AK8Q96MA6 479 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 CITED2Q99967 270 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 TRIM56Q9BRZ2 755 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 TM6SF1Q9BZW5 370 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 LSG1Q9H089 658 aaKnown RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 TASP1Q9H6P5 420 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 TTC12Q9H892 705 aaPredicted RBP5.83□□□□□ -1.48
RFC3-202ENST00000434425 FAM204AQ9H8W3 233 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 DMRT3Q9NQL9 472 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 HAUS2Q9NVX0 235 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 MTMR10Q9NXD2 777 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 GRHPRQ9UBQ7 328 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 PALD1Q9ULE6 856 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ASB3Q9Y575 518 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 ATP6V1DQ9Y5K8 247 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 GMEB1Q9Y692 573 aa5.83□□□□□ -1.48
RFC3-202ENST00000434425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.83□□□□□ -1.482e-7■■■□□ 14.7
RFC3-202ENST00000434425 TTC28Q96AY4 2481 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 ATRNL1Q5VV63 1379 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 CTAGE15A4D2H0 777 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 DDTLA6NHG4 134 aaPredicted RBP5.82□□□□□ -1.48
RFC3-202ENST00000434425 SLC9B1P1A6NJY1 282 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 CHURC1-FNTBB4DL54 471 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 NDUFS8O00217 210 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 CAPN5O15484 640 aaPredicted RBP5.82□□□□□ -1.48
RFC3-202ENST00000434425 ZW10O43264 779 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 DAPK3O43293 454 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 SRGAP3O43295 1099 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 MAN1A2O60476 641 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 SYNCRIPO60506 623 aaKnown RBP5.82□□□□□ -1.48
RFC3-202ENST00000434425 CPNE3O75131 537 aaKnown RBP5.82□□□□□ -1.48
RFC3-202ENST00000434425 TACC1O75410 805 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 DDAH1O94760 285 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 ECDO95905 644 aaPredicted RBP5.82□□□□□ -1.48
RFC3-202ENST00000434425 CTAGE8P0CG41 777 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 IFNAR1P17181 557 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 PDIA3P30101 505 aaKnown RBP5.82□□□□□ -1.48
RFC3-202ENST00000434425 L1CAMP32004 1257 aa5.82□□□□□ -1.48
RFC3-202ENST00000434425 RFX5P48382 616 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms