RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 NCDNQ9UBB6 729 aa14.55□□□□□ -0.08
CXCL12-205ENST00000395794 MYO15AQ9UKN7 3530 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 TNFRSF10BO14763 440 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 CILPO75339 1184 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 OLFM2O95897 454 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 MCCD1P59942 119 aaPredicted RBP14.54□□□□□ -0.08
CXCL12-205ENST00000395794 GAS6Q14393 721 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 ISM2Q6H9L7 571 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 FSTL4Q6MZW2 842 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 CD101Q93033 1021 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 SMOQ99835 787 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 LINC00597Q9H2U6 94 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 FAM124BQ9H5Z6 455 aaPredicted RBP14.54□□□□□ -0.08
CXCL12-205ENST00000395794 METTL14Q9HCE5 456 aaKnown RBP14.54□□□□□ -0.08
CXCL12-205ENST00000395794 TLR8Q9NR97 1041 aaKnown RBP14.54□□□□□ -0.08
CXCL12-205ENST00000395794 IL37Q9NZH6 218 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 GMIPQ9P107 970 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 CFAP97Q9P2B7 532 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 TBC1D14Q9P2M4 693 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 SLC8A2Q9UPR5 921 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 SH3BP1Q9Y3L3 701 aa14.54□□□□□ -0.08
CXCL12-205ENST00000395794 COCHO43405 550 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 LILRB5O75023 590 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 PAPSS2O95340 614 aaPredicted RBP14.53□□□□□ -0.08
CXCL12-205ENST00000395794 TUBP50607 506 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 SLC8A3P57103 927 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 CCDC40Q4G0X9 1142 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 ZNF394Q53GI3 561 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 SNX30Q5VWJ9 437 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 FILIP1Q7Z7B0 1213 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 SUMF1Q8NBK3 374 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 SEMA4DQ92854 862 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 JAKMIP2Q96AA8 810 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 CEP63Q96MT8 703 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 TWNKQ96RR1 684 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 EPC1Q9H2F5 836 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 CISHQ9NSE2 258 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 MAN1B1Q9UKM7 699 aa14.53□□□□□ -0.08
CXCL12-205ENST00000395794 SMG5Q9UPR3 1016 aaKnown RBP14.53□□□□□ -0.08
CXCL12-205ENST00000395794 PATJQ8NI35 1801 aa14.52□□□□□ -0.08
CXCL12-205ENST00000395794 E2F8A0AVK6 867 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 BICDL2A1A5D9 508 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 FAM92AA1XBS5 289 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 TRIM49BA6NDI0 452 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 CHURC1-FNTBB4DL54 471 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 BEST1O76090 585 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 ADH1CP00326 375 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 EGFP01133 1207 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 TDGF1P13385 188 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 ACO1P21399 889 aaKnown RBP14.52□□□□□ -0.09
CXCL12-205ENST00000395794 CNR2P34972 360 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 FNTBP49356 437 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 PMS1P54277 932 aaKnown RBP14.52□□□□□ -0.09
CXCL12-205ENST00000395794 YWHAEP62258 255 aaKnown RBP14.52□□□□□ -0.09
CXCL12-205ENST00000395794 GOLGA8FQ08AF8 430 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 GOLGA8DPQ0D2H9 430 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 CETN1Q12798 172 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 HEATR6Q6AI08 1181 aaKnown RBP14.52□□□□□ -0.09
CXCL12-205ENST00000395794 KLHL10Q6JEL2 608 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 CLEC20AQ6ZU45 233 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 LONP2Q86WA8 852 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 ZC3H3Q8IXZ2 948 aaKnown RBP14.52□□□□□ -0.09
CXCL12-205ENST00000395794 ZMIZ2Q8NF64 920 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 CHFRQ96EP1 664 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 TMEM176AQ96HP8 235 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 CCSER2Q9H7U1 834 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 PNPLA8Q9NP80 782 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 GMEB2Q9UKD1 530 aa14.52□□□□□ -0.09
CXCL12-205ENST00000395794 VPS13AQ96RL7 3174 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 TLR5O60602 858 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 RNF40O75150 1001 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 ZDHHC11BP0C7U3 371 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 HOXA6P31267 233 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 ZXDBP98169 803 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 SIM2Q14190 667 aaPredicted RBP14.51□□□□□ -0.09
CXCL12-205ENST00000395794 CBWD6Q4V339 395 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 CBWD3Q5JTY5 395 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 CBWD5Q5RIA9 395 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 PRR23BQ6ZRT6 265 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 TADA2BQ86TJ2 420 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 KIAA2013Q8IYS2 634 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 ADGRG2Q8IZP9 1017 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 GPR161Q8N6U8 529 aaKnown RBP14.51□□□□□ -0.09
CXCL12-205ENST00000395794 WHAMMQ8TF30 809 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 ACDQ96AP0 544 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 OTUB2Q96DC9 234 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 DUSP16Q9BY84 665 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 FBRSL1Q9HCM7 1045 aaKnown RBP14.51□□□□□ -0.09
CXCL12-205ENST00000395794 SCML2Q9UQR0 700 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 F5P12259 2224 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 DMDP11532 3685 aa14.51□□□□□ -0.09
CXCL12-205ENST00000395794 OBSL1O75147 1896 aa14.5□□□□□ -0.09
CXCL12-205ENST00000395794 K7ESF4 209 aa14.5□□□□□ -0.09
CXCL12-205ENST00000395794 BIN1O00499 593 aa14.5□□□□□ -0.09
CXCL12-205ENST00000395794 SCAMP3O14828 347 aaKnown RBP14.5□□□□□ -0.09
CXCL12-205ENST00000395794 GADD45BO75293 160 aaPredicted RBP14.5□□□□□ -0.09
CXCL12-205ENST00000395794 ATP5C1P36542 298 aaKnown RBP14.5□□□□□ -0.09
CXCL12-205ENST00000395794 PSEN1P49768 467 aa14.5□□□□□ -0.09
CXCL12-205ENST00000395794 CUL2Q13617 745 aa14.5□□□□□ -0.09
CXCL12-205ENST00000395794 DHCR24Q15392 516 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 714 ms