RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 RNASE9P60153 205 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SARNPP82979 210 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TFCP2Q12800 502 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ODF1Q14990 250 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PLCL1Q15111 1095 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PPA1Q15181 289 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PPP1R7Q15435 360 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SMAD2Q15796 467 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 KIAA0753Q2KHM9 967 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ANO4Q32M45 955 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ARL13BQ3SXY8 428 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PRAMEF19Q5SWL8 479 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 LIN54Q6MZP7 749 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 KIF6Q6ZMV9 814 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SYNE3Q6ZMZ3 975 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PLEKHM3Q6ZWE6 761 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 NLRP10Q86W26 655 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TMEM192Q8IY95 271 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 OR8H3Q8N146 312 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TMEM57Q8N5G2 664 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 FAM181AQ8N9Y4 354 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ANKRD52Q8NB46 1076 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CCDC148Q8NFR7 591 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 GOT1L1Q8NHS2 421 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ZSCAN18Q8TBC5 510 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SUN5Q8TC36 379 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 RFFLQ8WZ73 363 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 AHCYL2Q96HN2 611 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TMEM41AQ96HV5 264 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 MKRN2Q9H000 416 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TMEM60Q9H2L4 133 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 GHITMQ9H3K2 345 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TXNRD2Q9NNW7 524 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 IL23AQ9NPF7 189 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CLDND1Q9NY35 253 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CALCOCO1Q9P1Z2 691 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 HECAQ9UBI9 543 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CDC23Q9UJX2 597 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 VPS28Q9UK41 221 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PADI4Q9UM07 663 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TNPO3Q9Y5L0 923 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 FREM2Q5SZK8 3169 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 COL12A1Q99715 3063 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 FLT1P17948 1338 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 MYO3BQ8WXR4 1341 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 KIF16BQ96L93 1317 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 MYBBP1AQ9BQG0 1328 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 A0A0G2JLL6 359 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 GOLGA6L10A0A0M3HER8 536 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 A0A1W2PPH5 198 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 EIF4E1BA6NMX2 242 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 B4E1Z4 1266 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 MBTPS2O43462 519 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SRGAP2O75044 1071 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PPFIA2O75334 1257 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 STAM2O75886 525 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SOAT2O75908 522 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CSPG5O95196 566 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TOP3BO95985 862 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ATP1A3P13637 1013 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TFEBP19484 476 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 HLA-DPA1P20036 260 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ABCB4P21439 1286 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SP100P23497 879 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 LIFRP42702 1097 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 POLR2FP61218 127 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 RPS8P62241 208 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SLC7A5Q01650 507 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 NSUN2Q08J23 767 aaKnown RBP eCLIP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TEFQ10587 303 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SART3Q15020 963 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ZYXQ15942 572 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TCEAL5Q5H9L2 206 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SPDYCQ5MJ68 293 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ZNF362Q5T0B9 420 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 AP1ARQ63HQ0 302 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 KAZNQ674X7 775 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 RAB12Q6IQ22 244 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 RPUSD3Q6P087 351 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PGM2L1Q6PCE3 622 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 LBX2Q6XYB7 198 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 GBP6Q6ZN66 633 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 NUP54Q7Z3B4 507 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CCDC186Q7Z3E2 898 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PRRT2Q7Z6L0 340 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TMEM199Q8N511 208 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TSPYL6Q8N831 410 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 SPC24Q8NBT2 197 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ZBTB34Q8NCN2 500 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 DENND6BQ8NEG7 585 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 IPMKQ8NFU5 416 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 ADAMTS15Q8TE58 950 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 MISP3Q96FF7 219 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 VPS39Q96JC1 886 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 CNDP1Q96KN2 507 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 RTKNQ9BST9 563 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 THUMPD2Q9BTF0 503 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 TEX13BQ9BXU2 312 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 LRRCC1Q9C099 1032 aa3.78□□□□□ -1.8
ECHDC1-205ENST00000368295 PORCNQ9H237 461 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms