RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 KCTD13Q8WZ19 329 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 MS4A14Q96JA4 679 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 FAM210AQ96ND0 272 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 NAP1L3Q99457 506 aaPredicted RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 PKMYT1Q99640 499 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 C17orf80Q9BSJ5 609 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 B3GNT5Q9BYG0 378 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 METTL5Q9NRN9 209 aaKnown RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 HCSTQ9UBK5 93 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 FAN1Q9Y2M0 1017 aa12.67□□□□□ -0.38
USF1-203ENST00000368021 PRG3Q9Y2Y8 225 aaPredicted RBP12.67□□□□□ -0.38
USF1-203ENST00000368021 PAPSS1O43252 624 aaPredicted RBP12.66□□□□□ -0.38
USF1-203ENST00000368021 TSPY1Q01534 308 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 SLC6A3Q01959 620 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 OGDHQ02218 1023 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 ELAVL2Q12926 359 aaKnown RBP12.66□□□□□ -0.38
USF1-203ENST00000368021 OR6B2Q6IFH4 312 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 FAM35AQ86V20 835 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 RHOT1Q8IXI2 618 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 GPR161Q8N6U8 529 aaKnown RBP12.66□□□□□ -0.38
USF1-203ENST00000368021 ZNF689Q96CS4 500 aaPredicted RBP12.66□□□□□ -0.38
USF1-203ENST00000368021 SMARCD1Q96GM5 515 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 MED10Q9BTT4 135 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 UBXN6Q9BZV1 441 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 MTMR10Q9NXD2 777 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 TMEM59LQ9UK28 342 aa12.66□□□□□ -0.38
USF1-203ENST00000368021 EPOPA6NHQ4 379 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 CLDN5O00501 218 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 GABBR2O75899 941 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 GALTP07902 379 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 MARCKSL1P49006 195 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 SLC11A1P49279 550 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 ZNF143P52747 638 aaPredicted RBP12.65□□□□□ -0.38
USF1-203ENST00000368021 CCDC142Q17RM4 750 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 SLC26A9Q7LBE3 791 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 PIGZQ86VD9 579 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 CPNE8Q86YQ8 564 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 MMGT1Q8N4V1 131 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 FIBCD1Q8N539 461 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 NOA1Q8NC60 698 aaKnown RBP12.65□□□□□ -0.38
USF1-203ENST00000368021 OR10T2Q8NGX3 314 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 JOSD2Q8TAC2 188 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 MYLIPQ8WY64 445 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 GUCD1Q96NT3 240 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 CDX2Q99626 313 aaPredicted RBP12.65□□□□□ -0.38
USF1-203ENST00000368021 RC3H2Q9HBD1 1191 aaKnown RBP12.65□□□□□ -0.38
USF1-203ENST00000368021 CSNK1G1Q9HCP0 422 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 MARCH5Q9NX47 278 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 EHD2Q9NZN4 543 aa12.65□□□□□ -0.38
USF1-203ENST00000368021 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.65□□□□□ -0.38
USF1-203ENST00000368021 SF3B1O75533 1304 aaKnown RBP eCLIP12.65□□□□□ -0.386e-7■■■■■ 71.8
USF1-203ENST00000368021 C2CD4BA6NLJ0 364 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 F8VP50 259 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 AP1G2O75843 785 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 CSPG5O95196 566 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 PSMA2P25787 234 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 MRPL58Q14197 206 aaKnown RBP12.65□□□□□ -0.39
USF1-203ENST00000368021 NAA30Q147X3 362 aaPredicted RBP12.65□□□□□ -0.39
USF1-203ENST00000368021 ELF2Q15723 593 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.39
USF1-203ENST00000368021 SEL1L2Q5TEA6 688 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 POLNQ7Z5Q5 900 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 SCUBE3Q8IX30 993 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 KATNAL2Q8IYT4 538 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 MYLPFQ96A32 169 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 TGS1Q96RS0 853 aaKnown RBP12.65□□□□□ -0.39
USF1-203ENST00000368021 PNPLA8Q9NP80 782 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 SUFUQ9UMX1 484 aa12.65□□□□□ -0.39
USF1-203ENST00000368021 MRPL42Q9Y6G3 142 aaKnown RBP12.65□□□□□ -0.39
USF1-203ENST00000368021 VWA8A3KMH1 1905 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 PTPRDP23468 1912 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 CARNS1A5YM72 827 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 BEST1O76090 585 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 ZRANB2O95218 330 aaKnown RBP eCLIP12.64□□□□□ -0.39
USF1-203ENST00000368021 FGGP02679 453 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 PYGMP11217 842 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 FGFR3P22607 806 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 IGFBP4P22692 258 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 IRX1P78414 480 aaPredicted RBP12.64□□□□□ -0.39
USF1-203ENST00000368021 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
USF1-203ENST00000368021 FUT10Q6P4F1 479 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 C4orf50Q6ZRC1 276 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
USF1-203ENST00000368021 KHSRPQ92945 711 aaKnown RBP eCLIP12.64□□□□□ -0.39
USF1-203ENST00000368021 PIWIL1Q96J94 861 aaKnown RBP12.64□□□□□ -0.39
USF1-203ENST00000368021 CNPY3Q9BT09 278 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 OXCT2Q9BYC2 517 aaPredicted RBP12.64□□□□□ -0.39
USF1-203ENST00000368021 ASNSD1Q9NWL6 643 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 ZNF446Q9NWS9 450 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 COL4A6Q14031 1691 aa12.64□□□□□ -0.39
USF1-203ENST00000368021 TMEM265A0A087WTH1 108 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 CCDC188H7C350 402 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 PIK3R2O00459 728 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 DPYSL4O14531 572 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 LRCH4O75427 683 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 FBXO21O94952 628 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 PDGFRAP16234 1089 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 GPD1P21695 349 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms