RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 RMDN3Q96TC7 470 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 MYLK2Q9H1R3 596 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 SMOC2Q9H3U7 446 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 HEYLQ9NQ87 328 aaPredicted RBP6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 SHOC2Q9UQ13 582 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 RAD54BQ9Y620 910 aa6.59□□□□□ -1.35
RNU4-39P-201ENST00000362455 PPIP5K1Q6PFW1 1433 aa6.59□□□□□ -1.36
RNU4-39P-201ENST00000362455 WDR17Q8IZU2 1322 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 LGALS16A8MUM7 142 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 NPC1O15118 1278 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 CCP110O43303 1012 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 TLR5O60602 858 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 SPATA31D3P0C874 917 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 HIBADHP31937 336 aaKnown RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 GCLCP48506 637 aaPredicted RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 CPT1AP50416 773 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 RENBPP51606 427 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZNF134P52741 427 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 COPAP53621 1224 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 MC2RQ01718 297 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 OCA2Q04671 838 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 KRT17Q04695 432 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 NPY5RQ15761 445 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 RAB30Q15771 203 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 INSCQ1MX18 579 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 PDCD4Q53EL6 469 aaKnown RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 PLAG1Q6DJT9 500 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 FCRL6Q6DN72 434 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 LAYNQ6UX15 382 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 SPATA31D4Q6ZUB0 917 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 SMAP1Q8IYB5 467 aaPredicted RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 CACNA2D3Q8IZS8 1091 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 IPO4Q8TEX9 1081 aaKnown RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 SNX27Q96L92 541 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 MED15Q96RN5 788 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 DCLRE1CQ96SD1 692 aaKnown RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 TEX101Q9BY14 249 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 DHX36Q9H2U1 1008 aaKnown RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 PARD6AQ9NPB6 346 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 RGL1Q9NZL6 768 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 CAPN11Q9UMQ6 739 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 CHST2Q9Y4C5 530 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 DGKBQ9Y6T7 804 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 PEAK1Q9H792 1746 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 RREB1Q92766 1687 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 USP6P35125 1406 aa6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 PHRF1Q9P1Y6 1649 aaKnown RBP6.58□□□□□ -1.36
RNU4-39P-201ENST00000362455 TTC21BQ7Z4L5 1316 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 CENPJQ9HC77 1338 aaPredicted RBP6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 NUP188Q5SRE5 1749 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 AQP12BA6NM10 295 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 DIRC3C9JPN6 131 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 TOR1BO14657 336 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 NPHP1O15259 732 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZNF623O75123 536 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 SUN1O94901 812 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 GPANK1O95872 356 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 KCNA2P16389 499 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 TPH1P17752 444 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 PTDSS1P48651 473 aaKnown RBP6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 LOXL3P58215 753 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 JAG1P78504 1218 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 CNGB1Q14028 1251 aaPredicted RBP6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 SPARCL1Q14515 664 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZIK1Q3SY52 487 aaPredicted RBP6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 MGAT5BQ3V5L5 792 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 FOXR2Q6PJQ5 311 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 CRTC1Q6UUV9 634 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 USP49Q70CQ1 688 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 KCTD20Q7Z5Y7 419 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZNF354CQ86Y25 554 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZNF384Q8TF68 577 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 LTV1Q96GA3 475 aaPredicted RBP6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 TEPSINQ96N21 525 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 NECTIN3Q9NQS3 549 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 LRFN1Q9P244 771 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 IGSF9Q9P2J2 1179 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 GRHPRQ9UBQ7 328 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 SORCS3Q9UPU3 1222 aa6.57□□□□□ -1.36
RNU4-39P-201ENST00000362455 SLIT3O75094 1523 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 XDHP47989 1333 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 CEP350Q5VT06 3117 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 EXOC5O00471 708 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 KCNQ3O43525 872 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 RRP9O43818 475 aaKnown RBP6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 ERN1O75460 977 aaKnown RBP6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 RPS6KA4O75676 772 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 ELANEP08246 267 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 PXNP49023 591 aaPredicted RBP6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 ITGA8P53708 1063 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 C1QTNF8P60827 252 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 SATB1Q01826 763 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 CRHR2Q13324 411 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 BIRC3Q13489 604 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 CACHD1Q5VU97 1274 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 TMEM108Q6UXF1 575 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 TMPRSS9Q7Z410 1059 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 GDF7Q7Z4P5 450 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms