RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 CARD9Q9H257 536 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 C11orf49Q9H6J7 331 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 TXLNGQ9NUQ3 528 aa10.81□□□□□ -0.68
ABCF1-201ENST00000326195 RBAKQ9NYW8 714 aaPredicted RBP10.81□□□□□ -0.68
ABCF1-201ENST00000326195 CHD7Q9P2D1 2997 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 FOXN3O00409 490 aaPredicted RBP10.8□□□□□ -0.68
ABCF1-201ENST00000326195 DDX3YO15523 660 aaKnown RBP10.8□□□□□ -0.68
ABCF1-201ENST00000326195 TMEM253P0C7T8 217 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 SETSIPP0DME0 302 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 PTGIRP43119 386 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 SPOPLQ6IQ16 392 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 RFX8Q6ZV50 586 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 AGGF1Q8N302 714 aaeCLIP10.8□□□□□ -0.68
ABCF1-201ENST00000326195 GAD1Q99259 594 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 AGPAT1Q99943 283 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 PITPNM3Q9BZ71 974 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 PDLIM7Q9NR12 457 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 KRT82Q9NSB4 513 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 INTUQ9ULD6 942 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 PCDHA3Q9Y5H8 950 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 MOXD2PA6NHM9 499 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 I3L4J1 428 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 GSTA2P09210 222 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 ITGB8P26012 769 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 GJA8P48165 433 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 VPS41P49754 854 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 MFAP3P55082 362 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 GPC5P78333 572 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 MBTD1Q05BQ5 628 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 CCSAPQ6IQ19 270 aaPredicted RBP10.8□□□□□ -0.68
ABCF1-201ENST00000326195 C4orf50Q6ZRC1 276 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 TAOK1Q7L7X3 1001 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 PRUNE1Q86TP1 453 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 ALG3Q92685 438 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 DTNBP1Q96EV8 351 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 DCLRE1BQ9H816 532 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 PRG3Q9Y2Y8 225 aaPredicted RBP10.8□□□□□ -0.68
ABCF1-201ENST00000326195 WASF2Q9Y6W5 498 aa10.8□□□□□ -0.68
ABCF1-201ENST00000326195 BTNL10A8MVZ5 291 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CAPN9O14815 690 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 FGFR1P11362 822 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 DARSP14868 501 aaKnown RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 BRAFP15056 766 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CD58P19256 250 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 PRKCIP41743 596 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 DNAJC3Q13217 504 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 LSAMPQ13449 338 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CBWD6Q4V339 395 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CBWD3Q5JTY5 395 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CBWD5Q5RIA9 395 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 WDR60Q8WVS4 1066 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 NCSTNQ92542 709 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 DNAJC1Q96KC8 554 aaKnown RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 NT5C1BQ96P26 610 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 Q9Y3F1 56 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 GTPBP10A4D1E9 387 aaKnown RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 HAS3O00219 553 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 LYNP07948 512 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 IGFBP6P24592 240 aaPredicted RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 KPNB1Q14974 876 aaKnown RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CCDC6Q16204 474 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 WASHC2DQ5SRD0 308 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 DPY19L2P1Q6NXN4 242 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 TAF2Q6P1X5 1199 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 PHLDB2Q86SQ0 1253 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 TTC16Q8NEE8 873 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 ABHD8Q96I13 439 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 PWWP2AQ96N64 755 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 LRRC37BQ96QE4 947 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 STMN4Q9H169 189 aaPredicted RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 SUDS3Q9H7L9 328 aaPredicted RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CERS4Q9HA82 394 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 ARHGAP28Q9P2N2 729 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 ALG6Q9Y672 507 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 TCRBV7S2A1N4TA0A589 114 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 MAGEA13PA6NCF6 341 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CASTOR2A6NHX0 329 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 KPNA6O60684 536 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 STAG3L1P0CL83 205 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 STX2P32856 288 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CCDC15Q0P6D6 951 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 P3H1Q32P28 736 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 WDR44Q5JSH3 913 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 MFSD5Q6N075 450 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 DUS1LQ6P1R4 473 aaKnown RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 LRRC74BQ6ZQY2 392 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 SERINC5Q86VE9 423 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 LCA5Q86VQ0 697 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 TMEM109Q9BVC6 243 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CADM1Q9BY67 442 aaKnown RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 MTMR12Q9C0I1 747 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CDT1Q9H211 546 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 CHMP2BQ9UQN3 213 aa10.79□□□□□ -0.68
ABCF1-201ENST00000326195 TIMM13Q9Y5L4 95 aaPredicted RBP10.79□□□□□ -0.68
ABCF1-201ENST00000326195 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-201ENST00000326195 SMIM35A0A1B0GVV1 85 aa10.78□□□□□ -0.68
ABCF1-201ENST00000326195 MIF4GDA9UHW6 222 aaKnown RBP10.78□□□□□ -0.68
ABCF1-201ENST00000326195 ACKR2O00590 384 aa10.78□□□□□ -0.68
ABCF1-201ENST00000326195 TP73O15350 636 aa10.78□□□□□ -0.68
ABCF1-201ENST00000326195 TLR3O15455 904 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms