RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	RPF1	P38805	295 aa	Known RBP	5.16	□□□□□ -1.58
TGA1	tA(UGC)A	SMD1	Q02260	146 aa	Predicted RBP	5.16	□□□□□ -1.58
TGA1	tA(UGC)A	YLL006W-A	Q3E814	58 aa		5.16	□□□□□ -1.58
TGA1	tA(UGC)A	Q0032	Q9ZZX7	96 aa		5.16	□□□□□ -1.58
TGA1	tA(UGC)A	RPL28	P02406	149 aa	Known RBP	5.15	□□□□□ -1.59
TGA1	tA(UGC)A	RPL29	P05747	59 aa	Predicted RBP	5.15	□□□□□ -1.59
TGA1	tA(UGC)A	YKL044W	P36092	106 aa		5.15	□□□□□ -1.59
TGA1	tA(UGC)A	UBC11	P52492	156 aa		5.15	□□□□□ -1.59
TGA1	tA(UGC)A	YNR077C	P53758	84 aa		5.15	□□□□□ -1.59
TGA1	tA(UGC)A	YKL023C-A	Q2V2P3	75 aa		5.15	□□□□□ -1.59
TGA1	tA(UGC)A	SCS22	Q6Q595	175 aa		5.15	□□□□□ -1.59
TGA1	tA(UGC)A	ABF2	Q02486	183 aa		5.14	□□□□□ -1.59
TGA1	tA(UGC)A	MRPL44	P19956	98 aa		5.13	□□□□□ -1.59
TGA1	tA(UGC)A	MRPL11	P36521	249 aa	Predicted RBP	5.13	□□□□□ -1.59
TGA1	tA(UGC)A	YGL230C	P53074	147 aa		5.13	□□□□□ -1.59
TGA1	tA(UGC)A	YNL190W	P53872	204 aa		5.13	□□□□□ -1.59
TGA1	tA(UGC)A	YNL162W-A	Q3E7A8	72 aa		5.13	□□□□□ -1.59
TGA1	tA(UGC)A	HAC1	P41546	238 aa		5.12	□□□□□ -1.59
TGA1	tA(UGC)A	COA6	Q3E846	104 aa		5.12	□□□□□ -1.59
TGA1	tA(UGC)A	YLR415C	O13578	112 aa		5.11	□□□□□ -1.59
TGA1	tA(UGC)A	HAP3	P13434	144 aa		5.11	□□□□□ -1.59
TGA1	tA(UGC)A	UBC4	P15731	148 aa		5.11	□□□□□ -1.59
TGA1	tA(UGC)A	YDR010C	Q12426	110 aa		5.11	□□□□□ -1.59
TGA1	tA(UGC)A	UGX2	P32772	223 aa		5.1	□□□□□ -1.59
TGA1	tA(UGC)A	IGO2	Q9P305	131 aa		5.1	□□□□□ -1.59
TGA1	tA(UGC)A	CPR1	P14832	162 aa	Known RBP	5.09	□□□□□ -1.59
TGA1	tA(UGC)A	YPL073C	P40323	161 aa		5.09	□□□□□ -1.59
TGA1	tA(UGC)A	EOS1	P53938	366 aa		5.09	□□□□□ -1.59
TGA1	tA(UGC)A	YML079W	Q03629	201 aa		5.08	□□□□□ -1.6
TGA1	tA(UGC)A	CDC43	P18898	376 aa		5.07	□□□□□ -1.6
TGA1	tA(UGC)A	MSL1	P40567	111 aa	Predicted RBP	5.07	□□□□□ -1.6
TGA1	tA(UGC)A	YDL157C	Q12082	118 aa		5.07	□□□□□ -1.6
TGA1	tA(UGC)A	YLR156W	P0CE96	114 aa		5.06	□□□□□ -1.6
TGA1	tA(UGC)A	YLR159W	P0CE97	114 aa		5.06	□□□□□ -1.6
TGA1	tA(UGC)A	YLR161W	P0CE98	114 aa		5.06	□□□□□ -1.6
TGA1	tA(UGC)A	KNH1	P50112	268 aa		5.06	□□□□□ -1.6
TGA1	tA(UGC)A	HPA2	Q06592	156 aa		5.06	□□□□□ -1.6
TGA1	tA(UGC)A	MHR1	Q06630	226 aa		5.05	□□□□□ -1.6
TGA1	tA(UGC)A	HYP2	P23301	157 aa	Known RBP	5.04	□□□□□ -1.6
TGA1	tA(UGC)A	YFR057W	P43625	151 aa		5.04	□□□□□ -1.6
TGA1	tA(UGC)A	YER039C-A	P0CD97	72 aa		5.03	□□□□□ -1.6
TGA1	tA(UGC)A	SCM4	P32564	187 aa		5.03	□□□□□ -1.6
TGA1	tA(UGC)A	EDC2	P40023	145 aa	Predicted RBP	5.03	□□□□□ -1.6
TGA1	tA(UGC)A	RGM1	Q00453	211 aa		5.02	□□□□□ -1.61
TGA1	tA(UGC)A	YNL042W-B	Q3E7Z2	85 aa		5.02	□□□□□ -1.61
TGA1	tA(UGC)A	YOR020W-A	Q3E824	90 aa		5.02	□□□□□ -1.61
TGA1	tA(UGC)A	ATP5	P09457	212 aa		5.01	□□□□□ -1.61
TGA1	tA(UGC)A	YJL197C-A	P0C5P0	93 aa		5.01	□□□□□ -1.61
TGA1	tA(UGC)A	YGL149W	P53116	101 aa		5.01	□□□□□ -1.61
TGA1	tA(UGC)A	YOR268C	Q08734	132 aa		5.01	□□□□□ -1.61
TGA1	tA(UGC)A	MID2	P36027	376 aa		5	□□□□□ -1.61
TGA1	tA(UGC)A	YPL257W	Q08974	193 aa		5	□□□□□ -1.61
TGA1	tA(UGC)A	FYV7	Q12247	151 aa		5	□□□□□ -1.61
TGA1	tA(UGC)A	YBR230W-A	Q3E762	66 aa		5	□□□□□ -1.61
TGA1	tA(UGC)A	YCR007C	P25354	239 aa		4.99	□□□□□ -1.61
TGA1	tA(UGC)A	YIA6	P40556	373 aa		4.99	□□□□□ -1.61
TGA1	tA(UGC)A	YJR085C	P47131	105 aa	Known RBP	4.99	□□□□□ -1.61
TGA1	tA(UGC)A	ICY1	Q04329	127 aa		4.99	□□□□□ -1.61
TGA1	tA(UGC)A	IRC21	Q04772	201 aa		4.99	□□□□□ -1.61
TGA1	tA(UGC)A	NAT5	Q08689	176 aa		4.99	□□□□□ -1.61
TGA1	tA(UGC)A	COX10	P21592	462 aa		4.98	□□□□□ -1.61
TGA1	tA(UGC)A	SPG1	P50088	95 aa		4.98	□□□□□ -1.61
TGA1	tA(UGC)A	CGR1	P53188	120 aa		4.98	□□□□□ -1.61
TGA1	tA(UGC)A	YGR121W-A	Q3E816	71 aa		4.98	□□□□□ -1.61
TGA1	tA(UGC)A	RPL26A	P05743	127 aa	Known RBP	4.97	□□□□□ -1.61
TGA1	tA(UGC)A	SPT4	P32914	102 aa	Predicted RBP	4.97	□□□□□ -1.61
TGA1	tA(UGC)A	RPL26B	P53221	127 aa	Known RBP	4.97	□□□□□ -1.61
TGA1	tA(UGC)A	DDR2	P89113	61 aa		4.97	□□□□□ -1.61
TGA1	tA(UGC)A	PAU17	Q12370	124 aa		4.97	□□□□□ -1.61
TGA1	tA(UGC)A	YJL127C-B	Q3E828	52 aa		4.95	□□□□□ -1.62
TGA1	tA(UGC)A	KRE1	P17260	313 aa		4.94	□□□□□ -1.62
TGA1	tA(UGC)A	FUN14	P18411	198 aa		4.94	□□□□□ -1.62
TGA1	tA(UGC)A	FYV5	P25585	152 aa		4.93	□□□□□ -1.62
TGA1	tA(UGC)A	ARO2	P28777	376 aa	Known RBP	4.93	□□□□□ -1.62
TGA1	tA(UGC)A	YOR034C-A	Q3E735	80 aa		4.91	□□□□□ -1.62
TGA1	tA(UGC)A	YLR236C	A0A023PZG4	107 aa		4.89	□□□□□ -1.63
TGA1	tA(UGC)A	YHR130C	P38834	111 aa		4.89	□□□□□ -1.63
TGA1	tA(UGC)A	BSC4	P53841	131 aa		4.89	□□□□□ -1.63
TGA1	tA(UGC)A	ELC1	Q03071	99 aa		4.89	□□□□□ -1.63
TGA1	tA(UGC)A	ISU2	Q12056	156 aa		4.89	□□□□□ -1.63
TGA1	tA(UGC)A	PAU23	Q07987	124 aa		4.88	□□□□□ -1.63
TGA1	tA(UGC)A	YMR230W-A	Q3E7B5	62 aa		4.88	□□□□□ -1.63
TGA1	tA(UGC)A	MSA2	P36157	363 aa		4.87	□□□□□ -1.63
TGA1	tA(UGC)A	YHR007C-A	Q07074	71 aa		4.86	□□□□□ -1.63
TGA1	tA(UGC)A	YOR072W	Q08486	104 aa		4.85	□□□□□ -1.63
TGA1	tA(UGC)A	LSM8	P47093	109 aa	Known RBP	4.84	□□□□□ -1.63
TGA1	tA(UGC)A	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.84	□□□□□ -1.63
TGA1	tA(UGC)A	DUT1	P33317	147 aa		4.83	□□□□□ -1.64
TGA1	tA(UGC)A	HOT13	P36078	116 aa		4.83	□□□□□ -1.64
TGA1	tA(UGC)A	YBR027C	P38220	110 aa		4.83	□□□□□ -1.64
TGA1	tA(UGC)A	YLR363W-A	Q3E747	85 aa		4.83	□□□□□ -1.64
TGA1	tA(UGC)A	YER181C	P40097	107 aa		4.82	□□□□□ -1.64
TGA1	tA(UGC)A	MPC3	P53311	146 aa		4.82	□□□□□ -1.64
TGA1	tA(UGC)A	YLR296W	Q05898	108 aa		4.82	□□□□□ -1.64
TGA1	tA(UGC)A	MET32	Q12041	191 aa		4.82	□□□□□ -1.64
TGA1	tA(UGC)A	MRPL24	P36525	258 aa	Predicted RBP	4.81	□□□□□ -1.64
TGA1	tA(UGC)A	POP7	P38291	140 aa		4.81	□□□□□ -1.64
TGA1	tA(UGC)A	KSH1	Q8TGJ3	72 aa		4.81	□□□□□ -1.64
TGA1	tA(UGC)A	KTI11	Q3E840	82 aa		4.8	□□□□□ -1.64
TGA1	tA(UGC)A	RPL36B	O14455	100 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms