RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 YBL112CQ3E7Y4 105 aa2.07□□□□□ -2.08
snR42snR42 ADH1P00330 348 aaKnown RBP2.06□□□□□ -2.08
snR42snR42 HYP2P23301 157 aaKnown RBP2.06□□□□□ -2.08
snR42snR42 TOA2P32774 122 aa2.06□□□□□ -2.08
snR42snR42 PAU16P35994 123 aa2.06□□□□□ -2.08
snR42snR42 MVB12P42939 101 aa2.06□□□□□ -2.08
snR42snR42 YFL019CP43576 117 aa2.06□□□□□ -2.08
snR42snR42 ATP16Q12165 160 aa2.06□□□□□ -2.08
snR42snR42 YDR010CQ12426 110 aa2.06□□□□□ -2.08
snR42snR42 YBL039W-BP0C268 59 aa2.05□□□□□ -2.08
snR42snR42 PEX17P40155 199 aa2.05□□□□□ -2.08
snR42snR42 HAC1P41546 238 aa2.05□□□□□ -2.08
snR42snR42 YML079WQ03629 201 aa2.05□□□□□ -2.08
snR42snR42 SCS22Q6Q595 175 aa2.05□□□□□ -2.08
snR42snR42 RPL28P02406 149 aaKnown RBP2.04□□□□□ -2.08
snR42snR42 QCR8P08525 94 aa2.04□□□□□ -2.08
snR42snR42 HAP3P13434 144 aa2.04□□□□□ -2.08
snR42snR42 MRPL11P36521 249 aaPredicted RBP2.04□□□□□ -2.08
snR42snR42 KTI11Q3E840 82 aa2.04□□□□□ -2.08
snR42snR42 SSS1P35179 80 aa2.03□□□□□ -2.08
snR42snR42 KNH1P50112 268 aa2.03□□□□□ -2.08
snR42snR42 YLR050CQ12155 161 aaKnown RBP2.03□□□□□ -2.08
snR42snR42 YIL002W-AQ3E7Z5 69 aa2.03□□□□□ -2.08
snR42snR42 YLL006W-AQ3E814 58 aa2.03□□□□□ -2.08
snR42snR42 YKR041WP36134 250 aa2.02□□□□□ -2.09
snR42snR42 IGD1P43598 195 aa2.02□□□□□ -2.09
snR42snR42 YGL193CP53097 103 aa2.02□□□□□ -2.09
snR42snR42 TIM11P81449 96 aaPredicted RBP2.02□□□□□ -2.09
snR42snR42 CNL1Q06333 122 aa2.02□□□□□ -2.09
snR42snR42 MBF1O14467 151 aaKnown RBP2.01□□□□□ -2.09
snR42snR42 ATP5P09457 212 aa2.01□□□□□ -2.09
snR42snR42 YDL022C-AP0C5L6 82 aa2.01□□□□□ -2.09
snR42snR42 YER039C-AP0CD97 72 aa2.01□□□□□ -2.09
snR42snR42 YLR156WP0CE96 114 aa2.01□□□□□ -2.09
snR42snR42 YLR159WP0CE97 114 aa2.01□□□□□ -2.09
snR42snR42 YLR161WP0CE98 114 aa2.01□□□□□ -2.09
snR42snR42 ARO2P28777 376 aaKnown RBP2.01□□□□□ -2.09
snR42snR42 MID2P36027 376 aa2.01□□□□□ -2.09
snR42snR42 YPL073CP40323 161 aa2.01□□□□□ -2.09
snR42snR42 YNL190WP53872 204 aa2.01□□□□□ -2.09
snR42snR42 YML108WQ03759 105 aa2.01□□□□□ -2.09
snR42snR42 CUE4Q04201 117 aaPredicted RBP2.01□□□□□ -2.09
snR42snR42 SEN15Q04675 128 aa2.01□□□□□ -2.09
snR42snR42 YIL134C-AQ45U18 67 aa2.01□□□□□ -2.09
snR42snR42 IGO2Q9P305 131 aa2.01□□□□□ -2.09
snR42snR42 RPL26AP05743 127 aaKnown RBP2□□□□□ -2.09
snR42snR42 UBC4P15731 148 aa2□□□□□ -2.09
snR42snR42 MRPL44P19956 98 aa2□□□□□ -2.09
snR42snR42 UGX2P32772 223 aa2□□□□□ -2.09
snR42snR42 YKL044WP36092 106 aa2□□□□□ -2.09
snR42snR42 MSL1P40567 111 aaPredicted RBP2□□□□□ -2.09
snR42snR42 RPL26BP53221 127 aaKnown RBP2□□□□□ -2.09
snR42snR42 MRPS12P53732 153 aa2□□□□□ -2.09
snR42snR42 DDR2P89113 61 aa2□□□□□ -2.09
snR42snR42 HPA2Q06592 156 aa2□□□□□ -2.09
snR42snR42 YOR268CQ08734 132 aa2□□□□□ -2.09
snR42snR42 YFR057WP43625 151 aa1.99□□□□□ -2.09
snR42snR42 YPL257WQ08974 193 aa1.99□□□□□ -2.09
snR42snR42 PAU17Q12370 124 aa1.99□□□□□ -2.09
snR42snR42 YKL023C-AQ2V2P3 75 aa1.99□□□□□ -2.09
snR42snR42 YOR020W-AQ3E824 90 aa1.99□□□□□ -2.09
snR42snR42 COA6Q3E846 104 aa1.99□□□□□ -2.09
snR42snR42 RPL29P05747 59 aaPredicted RBP1.98□□□□□ -2.09
snR42snR42 CPR1P14832 162 aaKnown RBP1.98□□□□□ -2.09
snR42snR42 SEC11P15367 167 aa1.98□□□□□ -2.09
snR42snR42 COX10P21592 462 aa1.98□□□□□ -2.09
snR42snR42 SCM4P32564 187 aa1.98□□□□□ -2.09
snR42snR42 YEL067CP39978 195 aa1.98□□□□□ -2.09
snR42snR42 EDC2P40023 145 aaPredicted RBP1.98□□□□□ -2.09
snR42snR42 YIA6P40556 373 aa1.98□□□□□ -2.09
snR42snR42 KSH1Q8TGJ3 72 aa1.98□□□□□ -2.09
snR42snR42 SPG1P50088 95 aa1.97□□□□□ -2.09
snR42snR42 YGL230CP53074 147 aa1.97□□□□□ -2.09
snR42snR42 YNL042W-BQ3E7Z2 85 aa1.97□□□□□ -2.09
snR42snR42 YJL127C-BQ3E828 52 aa1.97□□□□□ -2.09
snR42snR42 SPT4P32914 102 aaPredicted RBP1.96□□□□□ -2.1
snR42snR42 MRPL24P36525 258 aaPredicted RBP1.96□□□□□ -2.1
snR42snR42 YNR077CP53758 84 aa1.96□□□□□ -2.1
snR42snR42 BSC4P53841 131 aa1.96□□□□□ -2.1
snR42snR42 IRC21Q04772 201 aa1.96□□□□□ -2.1
snR42snR42 YGR121W-AQ3E816 71 aa1.96□□□□□ -2.1
snR42snR42 YLR236CA0A023PZG4 107 aa1.95□□□□□ -2.1
snR42snR42 FUN14P18411 198 aa1.95□□□□□ -2.1
snR42snR42 YHR130CP38834 111 aa1.95□□□□□ -2.1
snR42snR42 YJR085CP47131 105 aaKnown RBP1.95□□□□□ -2.1
snR42snR42 CGR1P53188 120 aa1.95□□□□□ -2.1
snR42snR42 RGM1Q00453 211 aa1.95□□□□□ -2.1
snR42snR42 ELC1Q03071 99 aa1.95□□□□□ -2.1
snR42snR42 ICY1Q04329 127 aa1.95□□□□□ -2.1
snR42snR42 YHR007C-AQ07074 71 aa1.95□□□□□ -2.1
snR42snR42 NAT5Q08689 176 aa1.95□□□□□ -2.1
snR42snR42 YDL157CQ12082 118 aa1.95□□□□□ -2.1
snR42snR42 YBR230W-AQ3E762 66 aa1.95□□□□□ -2.1
snR42snR42 CMC4Q3E7A9 73 aa1.95□□□□□ -2.1
snR42snR42 YHR139C-AO13536 103 aa1.94□□□□□ -2.1
snR42snR42 KRE1P17260 313 aa1.94□□□□□ -2.1
snR42snR42 BET1P22804 142 aa1.94□□□□□ -2.1
snR42snR42 FYV5P25585 152 aa1.94□□□□□ -2.1
snR42snR42 YOR034C-AQ3E735 80 aa1.94□□□□□ -2.1
snR42snR42 PAU23Q07987 124 aa1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 94.9 ms